RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 NINLQ9Y2I6 1382 aa20.19■□□□□ 0.82
MAP1LC3B-201ENST00000268607 CPSF1Q10570 1443 aaKnown RBP20.19■□□□□ 0.82
MAP1LC3B-201ENST00000268607 CANXP27824 592 aaKnown RBP20.19■□□□□ 0.82
MAP1LC3B-201ENST00000268607 USP32Q8NFA0 1604 aa20.18■□□□□ 0.82
MAP1LC3B-201ENST00000268607 VIRMAQ69YN4 1812 aaKnown RBP20.18■□□□□ 0.82
MAP1LC3B-201ENST00000268607 NGEFQ8N5V2 710 aa20.18■□□□□ 0.82
MAP1LC3B-201ENST00000268607 PANK1Q8TE04 598 aa20.18■□□□□ 0.82
MAP1LC3B-201ENST00000268607 GZF1Q9H116 711 aaPredicted RBP20.18■□□□□ 0.82
MAP1LC3B-201ENST00000268607 XRN1Q8IZH2 1706 aaKnown RBP20.17■□□□□ 0.82
MAP1LC3B-201ENST00000268607 GOLGA6L3A6NEY3 463 aa20.17■□□□□ 0.82
MAP1LC3B-201ENST00000268607 FOXO3O43524 673 aa20.17■□□□□ 0.82
MAP1LC3B-201ENST00000268607 DIP2AQ14689 1571 aa20.17■□□□□ 0.82
MAP1LC3B-201ENST00000268607 TTC21BQ7Z4L5 1316 aa20.17■□□□□ 0.82
MAP1LC3B-201ENST00000268607 CHD2O14647 1828 aaKnown RBP20.17■□□□□ 0.82
MAP1LC3B-201ENST00000268607 POLKQ9UBT6 870 aa20.16■□□□□ 0.82
MAP1LC3B-201ENST00000268607 SPRYD3Q8NCJ5 442 aa20.16■□□□□ 0.82
MAP1LC3B-201ENST00000268607 COG3Q96JB2 828 aa20.16■□□□□ 0.82
MAP1LC3B-201ENST00000268607 MAPK8IP3Q9UPT6 1336 aa20.15■□□□□ 0.82
MAP1LC3B-201ENST00000268607 LMOD2Q6P5Q4 547 aa20.15■□□□□ 0.82
MAP1LC3B-201ENST00000268607 TNNQ9UQP3 1299 aa20.15■□□□□ 0.82
MAP1LC3B-201ENST00000268607 COG6Q9Y2V7 657 aa20.15■□□□□ 0.82
MAP1LC3B-201ENST00000268607 PLEKHG3A1L390 1219 aa20.15■□□□□ 0.82
MAP1LC3B-201ENST00000268607 PHF23Q9BUL5 403 aaPredicted RBP20.15■□□□□ 0.82
MAP1LC3B-201ENST00000268607 TSR2Q969E8 191 aaKnown RBP20.14■□□□□ 0.82
MAP1LC3B-201ENST00000268607 TBC1D2Q9BYX2 928 aa20.14■□□□□ 0.82
MAP1LC3B-201ENST00000268607 ZNF335Q9H4Z2 1342 aaPredicted RBP20.14■□□□□ 0.81
MAP1LC3B-201ENST00000268607 PIK3R4Q99570 1358 aa20.14■□□□□ 0.81
MAP1LC3B-201ENST00000268607 CLUAP1Q96AJ1 413 aa20.13■□□□□ 0.81
MAP1LC3B-201ENST00000268607 LMTK3Q96Q04 1460 aa20.13■□□□□ 0.81
MAP1LC3B-201ENST00000268607 WDR63Q8IWG1 891 aa20.13■□□□□ 0.81
MAP1LC3B-201ENST00000268607 ZNF692Q9BU19 519 aaPredicted RBP20.13■□□□□ 0.81
MAP1LC3B-201ENST00000268607 IQSEC2Q5JU85 1478 aa20.13■□□□□ 0.81
MAP1LC3B-201ENST00000268607 RARSP54136 660 aaKnown RBP20.12■□□□□ 0.81
MAP1LC3B-201ENST00000268607 EDC4Q6P2E9 1401 aaKnown RBP20.12■□□□□ 0.81
MAP1LC3B-201ENST00000268607 FSD2A1L4K1 749 aa20.12■□□□□ 0.81
MAP1LC3B-201ENST00000268607 DIAPH1O60610 1272 aaKnown RBP20.12■□□□□ 0.81
MAP1LC3B-201ENST00000268607 ZBTB7CA1YPR0 619 aa20.11■□□□□ 0.81
MAP1LC3B-201ENST00000268607 HMOX1P09601 288 aa20.11■□□□□ 0.81
MAP1LC3B-201ENST00000268607 PLEKHF1Q96S99 279 aa20.11■□□□□ 0.81
MAP1LC3B-201ENST00000268607 PHF8Q9UPP1 1060 aa20.11■□□□□ 0.81
MAP1LC3B-201ENST00000268607 NALCNQ8IZF0 1738 aa20.11■□□□□ 0.81
MAP1LC3B-201ENST00000268607 CDC42BPGQ6DT37 1551 aa20.11■□□□□ 0.81
MAP1LC3B-201ENST00000268607 TMEM94Q12767 1356 aa20.11■□□□□ 0.81
MAP1LC3B-201ENST00000268607 NLRP6P59044 892 aa20.1■□□□□ 0.81
MAP1LC3B-201ENST00000268607 UPF2Q9HAU5 1272 aaKnown RBP20.1■□□□□ 0.81
MAP1LC3B-201ENST00000268607 TMPOP42166 694 aaKnown RBP20.1■□□□□ 0.81
MAP1LC3B-201ENST00000268607 TBC1D32Q96NH3 1257 aa20.1■□□□□ 0.81
MAP1LC3B-201ENST00000268607 USP6P35125 1406 aa20.1■□□□□ 0.81
MAP1LC3B-201ENST00000268607 ABTB2Q8N961 1025 aa20.1■□□□□ 0.81
MAP1LC3B-201ENST00000268607 MCM4P33991 863 aa20.09■□□□□ 0.81
MAP1LC3B-201ENST00000268607 PSME1Q06323 249 aa20.09■□□□□ 0.81
MAP1LC3B-201ENST00000268607 CCDC27Q2M243 656 aa20.09■□□□□ 0.81
MAP1LC3B-201ENST00000268607 PDE3AQ14432 1141 aa20.08■□□□□ 0.81
MAP1LC3B-201ENST00000268607 TRIM35Q9UPQ4 493 aa20.08■□□□□ 0.8
MAP1LC3B-201ENST00000268607 ADGRB2O60241 1585 aa20.07■□□□□ 0.8
MAP1LC3B-201ENST00000268607 RLBP1P12271 317 aa20.07■□□□□ 0.8
MAP1LC3B-201ENST00000268607 RIPK4P57078 832 aa20.07■□□□□ 0.8
MAP1LC3B-201ENST00000268607 HSP90AB2PQ58FF8 381 aa20.06■□□□□ 0.8
MAP1LC3B-201ENST00000268607 MYH16Q9H6N6 1097 aa20.06■□□□□ 0.8
MAP1LC3B-201ENST00000268607 STRCP1A6NGW2 1772 aa20.05■□□□□ 0.8
MAP1LC3B-201ENST00000268607 COL3A1P02461 1466 aaPredicted RBP20.05■□□□□ 0.8
MAP1LC3B-201ENST00000268607 ADGRL3Q9HAR2 1447 aa20.05■□□□□ 0.8
MAP1LC3B-201ENST00000268607 EXOSC9Q06265 439 aaKnown RBP20.05■□□□□ 0.8
MAP1LC3B-201ENST00000268607 MAP2P11137 1827 aaKnown RBP20.05■□□□□ 0.8
MAP1LC3B-201ENST00000268607 ERBB4Q15303 1308 aa20.04■□□□□ 0.8
MAP1LC3B-201ENST00000268607 C19orf44Q9H6X5 657 aa20.04■□□□□ 0.8
MAP1LC3B-201ENST00000268607 ITSN1Q15811 1721 aa20.04■□□□□ 0.8
MAP1LC3B-201ENST00000268607 ESPNB1AK53 854 aa20.04■□□□□ 0.8
MAP1LC3B-201ENST00000268607 KIF20BQ96Q89 1820 aa20.04■□□□□ 0.8
MAP1LC3B-201ENST00000268607 TRAK2O60296 914 aa20.03■□□□□ 0.8
MAP1LC3B-201ENST00000268607 ATF3P18847 181 aa20.03■□□□□ 0.8
MAP1LC3B-201ENST00000268607 PRKAR2BP31323 418 aa20.03■□□□□ 0.8
MAP1LC3B-201ENST00000268607 LTV1Q96GA3 475 aaPredicted RBP20.02■□□□□ 0.8
MAP1LC3B-201ENST00000268607 PDZRN3Q9UPQ7 1066 aa20.01■□□□□ 0.79
MAP1LC3B-201ENST00000268607 PCDHB15Q9Y5E8 787 aa20.01■□□□□ 0.79
MAP1LC3B-201ENST00000268607 PHACTR3Q96KR7 559 aa20.01■□□□□ 0.79
MAP1LC3B-201ENST00000268607 PDCL3Q9H2J4 239 aa20.01■□□□□ 0.79
MAP1LC3B-201ENST00000268607 TOPAZ1Q8N9V7 1692 aa20.01■□□□□ 0.79
MAP1LC3B-201ENST00000268607 AKAP12Q02952 1782 aa20.01■□□□□ 0.79
MAP1LC3B-201ENST00000268607 MON2Q7Z3U7 1717 aa20.01■□□□□ 0.79
MAP1LC3B-201ENST00000268607 STRCQ7RTU9 1775 aa20■□□□□ 0.79
MAP1LC3B-201ENST00000268607 MRE11P49959 708 aa20■□□□□ 0.79
MAP1LC3B-201ENST00000268607 THUMPD2Q9BTF0 503 aaKnown RBP20■□□□□ 0.79
MAP1LC3B-201ENST00000268607 PNPLA6Q8IY17 1366 aa20■□□□□ 0.79
MAP1LC3B-201ENST00000268607 AEBP1Q8IUX7 1158 aa19.99■□□□□ 0.79
MAP1LC3B-201ENST00000268607 FMN2Q9NZ56 1722 aa19.99■□□□□ 0.79
MAP1LC3B-201ENST00000268607 MAP3K19Q56UN5 1328 aa19.98■□□□□ 0.79
MAP1LC3B-201ENST00000268607 A0A0U1RQG5 324 aaPredicted RBP19.98■□□□□ 0.79
MAP1LC3B-201ENST00000268607 SMC4Q9NTJ3 1288 aa19.98■□□□□ 0.79
MAP1LC3B-201ENST00000268607 CHMP5Q9NZZ3 219 aa19.98■□□□□ 0.79
MAP1LC3B-201ENST00000268607 SSH2Q76I76 1423 aa19.98■□□□□ 0.79
MAP1LC3B-201ENST00000268607 FCHSD2O94868 740 aa19.97■□□□□ 0.79
MAP1LC3B-201ENST00000268607 GRPEL1Q9HAV7 217 aa19.97■□□□□ 0.79
MAP1LC3B-201ENST00000268607 CABLES1Q8TDN4 633 aa19.97■□□□□ 0.79
MAP1LC3B-201ENST00000268607 ANKRD26Q9UPS8 1709 aa19.96■□□□□ 0.79
MAP1LC3B-201ENST00000268607 SSH1Q8WYL5 1049 aa19.96■□□□□ 0.79
MAP1LC3B-201ENST00000268607 IL13P35225 146 aa19.96■□□□□ 0.79
MAP1LC3B-201ENST00000268607 AMPHP49418 695 aa19.95■□□□□ 0.78
MAP1LC3B-201ENST00000268607 RBM10P98175 930 aaKnown RBP19.95■□□□□ 0.78
MAP1LC3B-201ENST00000268607 EIF4A2Q14240 407 aaKnown RBP19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms