RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 HSP90AB2PQ58FF8 381 aa16.4■□□□□ 0.22
PRPF6-201ENST00000266079 PIK3C2AO00443 1686 aa16.39■□□□□ 0.22
PRPF6-201ENST00000266079 RRP1P56182 461 aaKnown RBP16.39■□□□□ 0.21
PRPF6-201ENST00000266079 EXOC6Q8TAG9 804 aa16.38■□□□□ 0.21
PRPF6-201ENST00000266079 GCP02774 474 aa16.38■□□□□ 0.21
PRPF6-201ENST00000266079 DIAPH1O60610 1272 aaKnown RBP16.37■□□□□ 0.21
PRPF6-201ENST00000266079 HMOX1P09601 288 aa16.37■□□□□ 0.21
PRPF6-201ENST00000266079 HAP1P54257 671 aaPredicted RBP16.37■□□□□ 0.21
PRPF6-201ENST00000266079 BRPF3Q9ULD4 1205 aa16.37■□□□□ 0.21
PRPF6-201ENST00000266079 GSE1Q14687 1217 aa16.37■□□□□ 0.21
PRPF6-201ENST00000266079 NEUROD2Q15784 382 aa16.37■□□□□ 0.21
PRPF6-201ENST00000266079 MAP2P11137 1827 aaKnown RBP16.37■□□□□ 0.21
PRPF6-201ENST00000266079 TOM1O60784 492 aa16.37■□□□□ 0.21
PRPF6-201ENST00000266079 SPATA31A3Q5VYP0 1347 aa16.35■□□□□ 0.21
PRPF6-201ENST00000266079 CHRNA2Q15822 529 aa16.35■□□□□ 0.21
PRPF6-201ENST00000266079 DDRGK1Q96HY6 314 aa16.35■□□□□ 0.21
PRPF6-201ENST00000266079 ANKRD26Q9UPS8 1709 aa16.35■□□□□ 0.21
PRPF6-201ENST00000266079 USP31Q70CQ4 1352 aa16.35■□□□□ 0.21
PRPF6-201ENST00000266079 RRP7AQ9Y3A4 280 aaKnown RBP16.35■□□□□ 0.21
PRPF6-201ENST00000266079 KIF1AQ12756 1690 aa16.34■□□□□ 0.21
PRPF6-201ENST00000266079 CERKQ8TCT0 537 aa16.34■□□□□ 0.21
PRPF6-201ENST00000266079 PXDNQ92626 1479 aa16.33■□□□□ 0.2
PRPF6-201ENST00000266079 AATKQ6ZMQ8 1374 aa16.33■□□□□ 0.2
PRPF6-201ENST00000266079 SOS2Q07890 1332 aaPredicted RBP16.33■□□□□ 0.2
PRPF6-201ENST00000266079 APAF1O14727 1248 aa16.32■□□□□ 0.2
PRPF6-201ENST00000266079 EIF4A2Q14240 407 aaKnown RBP16.32■□□□□ 0.2
PRPF6-201ENST00000266079 TNS3Q68CZ2 1445 aa16.32■□□□□ 0.2
PRPF6-201ENST00000266079 HOXC9P31274 260 aa16.31■□□□□ 0.2
PRPF6-201ENST00000266079 AEBP1Q8IUX7 1158 aa16.31■□□□□ 0.2
PRPF6-201ENST00000266079 KCNH5Q8NCM2 988 aa16.31■□□□□ 0.2
PRPF6-201ENST00000266079 RCAN3Q9UKA8 241 aa16.31■□□□□ 0.2
PRPF6-201ENST00000266079 USHBP1Q8N6Y0 703 aa16.31■□□□□ 0.2
PRPF6-201ENST00000266079 ROBO1Q9Y6N7 1651 aa16.3■□□□□ 0.2
PRPF6-201ENST00000266079 IL13P35225 146 aa16.3■□□□□ 0.2
PRPF6-201ENST00000266079 NFKBIBQ15653 356 aa16.3■□□□□ 0.2
PRPF6-201ENST00000266079 AXIN2Q9Y2T1 843 aa16.29■□□□□ 0.2
PRPF6-201ENST00000266079 SBNO1A3KN83 1393 aa16.29■□□□□ 0.2
PRPF6-201ENST00000266079 TRPM3Q9HCF6 1732 aaPredicted RBP16.29■□□□□ 0.2
PRPF6-201ENST00000266079 FLT4P35916 1363 aa16.28■□□□□ 0.2
PRPF6-201ENST00000266079 PNPLA6Q8IY17 1366 aa16.28■□□□□ 0.2
PRPF6-201ENST00000266079 SULT6B1Q6IMI4 303 aa16.28■□□□□ 0.2
PRPF6-201ENST00000266079 NUTM2BA6NNL0 878 aaPredicted RBP16.28■□□□□ 0.2
PRPF6-201ENST00000266079 NUTM2EB1AL46 878 aaPredicted RBP16.28■□□□□ 0.2
PRPF6-201ENST00000266079 PRKAR2BP31323 418 aa16.28■□□□□ 0.2
PRPF6-201ENST00000266079 ARHGEF25Q86VW2 580 aa16.28■□□□□ 0.2
PRPF6-201ENST00000266079 NUTM2AQ8IVF1 878 aaPredicted RBP16.28■□□□□ 0.2
PRPF6-201ENST00000266079 LRRC59Q96AG4 307 aaKnown RBP16.28■□□□□ 0.2
PRPF6-201ENST00000266079 COL3A1P02461 1466 aaPredicted RBP16.27■□□□□ 0.2
PRPF6-201ENST00000266079 USP19O94966 1318 aa16.27■□□□□ 0.2
PRPF6-201ENST00000266079 FRAT1Q92837 279 aaPredicted RBP16.27■□□□□ 0.2
PRPF6-201ENST00000266079 PEAK1Q9H792 1746 aa16.27■□□□□ 0.19
PRPF6-201ENST00000266079 MARF1Q9Y4F3 1742 aaKnown RBP16.27■□□□□ 0.19
PRPF6-201ENST00000266079 ARHGEF10O15013 1369 aa16.26■□□□□ 0.19
PRPF6-201ENST00000266079 KIAA0232Q92628 1395 aa16.26■□□□□ 0.19
PRPF6-201ENST00000266079 PRDM11Q9NQV5 511 aa16.26■□□□□ 0.19
PRPF6-201ENST00000266079 CDK12Q9NYV4 1490 aaPredicted RBP16.26■□□□□ 0.19
PRPF6-201ENST00000266079 MED1Q15648 1581 aaPredicted RBP16.26■□□□□ 0.19
PRPF6-201ENST00000266079 EIF5BO60841 1220 aaKnown RBP16.26■□□□□ 0.19
PRPF6-201ENST00000266079 TCP11L2Q8N4U5 519 aa16.26■□□□□ 0.19
PRPF6-201ENST00000266079 ADAMTS2O95450 1211 aa16.25■□□□□ 0.19
PRPF6-201ENST00000266079 IP6K1Q92551 441 aa16.25■□□□□ 0.19
PRPF6-201ENST00000266079 EYA1Q99502 592 aa16.25■□□□□ 0.19
PRPF6-201ENST00000266079 SHPRHQ149N8 1683 aa16.25■□□□□ 0.19
PRPF6-201ENST00000266079 PHACTR3Q96KR7 559 aa16.24■□□□□ 0.19
PRPF6-201ENST00000266079 PDE3BQ13370 1112 aa16.24■□□□□ 0.19
PRPF6-201ENST00000266079 MAPK8IP3Q9UPT6 1336 aa16.24■□□□□ 0.19
PRPF6-201ENST00000266079 ALS2Q96Q42 1657 aa16.24■□□□□ 0.19
PRPF6-201ENST00000266079 CSB-PGBD3P0DP91 1061 aa16.24■□□□□ 0.19
PRPF6-201ENST00000266079 RUNDC1Q96C34 613 aa16.24■□□□□ 0.19
PRPF6-201ENST00000266079 NFAT5O94916 1531 aa16.23■□□□□ 0.19
PRPF6-201ENST00000266079 CDCA7LQ96GN5 454 aa16.23■□□□□ 0.19
PRPF6-201ENST00000266079 ANKRD24Q8TF21 1146 aa16.22■□□□□ 0.19
PRPF6-201ENST00000266079 BLMP54132 1417 aaPredicted RBP16.22■□□□□ 0.19
PRPF6-201ENST00000266079 NBPF6Q5VWK0 638 aa16.22■□□□□ 0.19
PRPF6-201ENST00000266079 NBPF4Q96M43 638 aa16.22■□□□□ 0.19
PRPF6-201ENST00000266079 RSPH6AQ9H0K4 717 aa16.22■□□□□ 0.19
PRPF6-201ENST00000266079 STRN4Q9NRL3 753 aa16.22■□□□□ 0.19
PRPF6-201ENST00000266079 NLRP2Q9NX02 1062 aa16.21■□□□□ 0.19
PRPF6-201ENST00000266079 INSRP06213 1382 aa16.2■□□□□ 0.18
PRPF6-201ENST00000266079 LTN1O94822 1766 aa16.2■□□□□ 0.18
PRPF6-201ENST00000266079 PLEKHF1Q96S99 279 aa16.2■□□□□ 0.18
PRPF6-201ENST00000266079 NHSL1Q5SYE7 1610 aa16.19■□□□□ 0.18
PRPF6-201ENST00000266079 FCHSD2O94868 740 aa16.19■□□□□ 0.18
PRPF6-201ENST00000266079 DAXXQ9UER7 740 aaPredicted RBP16.19■□□□□ 0.18
PRPF6-201ENST00000266079 SLC4A3P48751 1232 aa16.19■□□□□ 0.18
PRPF6-201ENST00000266079 SLIT3O75094 1523 aa16.19■□□□□ 0.18
PRPF6-201ENST00000266079 FAM83GA6ND36 823 aa16.19■□□□□ 0.18
PRPF6-201ENST00000266079 FAM43AQ8N2R8 423 aa16.19■□□□□ 0.18
PRPF6-201ENST00000266079 HSPA1LP34931 641 aa16.18■□□□□ 0.18
PRPF6-201ENST00000266079 THUMPD2Q9BTF0 503 aaKnown RBP16.18■□□□□ 0.18
PRPF6-201ENST00000266079 RIPK4P57078 832 aa16.17■□□□□ 0.18
PRPF6-201ENST00000266079 SKAP1Q86WV1 359 aa16.17■□□□□ 0.18
PRPF6-201ENST00000266079 TMPOP42166 694 aaKnown RBP16.16■□□□□ 0.18
PRPF6-201ENST00000266079 ERBB3P21860 1342 aa16.16■□□□□ 0.18
PRPF6-201ENST00000266079 PHLPP1O60346 1717 aa16.16■□□□□ 0.18
PRPF6-201ENST00000266079 DCTN1Q14203 1278 aa16.16■□□□□ 0.18
PRPF6-201ENST00000266079 CRBNQ96SW2 442 aa16.16■□□□□ 0.18
PRPF6-201ENST00000266079 BTG4Q9NY30 223 aa16.16■□□□□ 0.18
PRPF6-201ENST00000266079 EVA1CP58658 441 aa16.15■□□□□ 0.18
PRPF6-201ENST00000266079 SPINK5Q9NQ38 1064 aaPredicted RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms