RNA–Protein interactions for RNA: ENST00000265562.4

PTPN23-201, Transcript of protein tyrosine phosphatase, non-receptor type 23, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN23, Length 5,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23-201ENST00000265562 RAD21O60216 631 aa16.56■□□□□ 0.24
PTPN23-201ENST00000265562 TMEM132EQ6IEE7 984 aa16.56■□□□□ 0.24
PTPN23-201ENST00000265562 ZNHIT6Q9NWK9 470 aaKnown RBP16.56■□□□□ 0.24
PTPN23-201ENST00000265562 SLC4A2P04920 1241 aa16.56■□□□□ 0.24
PTPN23-201ENST00000265562 SART3Q15020 963 aaKnown RBP16.56■□□□□ 0.24
PTPN23-201ENST00000265562 MAP3K11Q16584 847 aa16.56■□□□□ 0.24
PTPN23-201ENST00000265562 KIF2AO00139 706 aaPredicted RBP16.56■□□□□ 0.24
PTPN23-201ENST00000265562 TCEAL9Q9UHQ7 104 aa16.56■□□□□ 0.24
PTPN23-201ENST00000265562 CFAP45Q9UL16 551 aa16.56■□□□□ 0.24
PTPN23-201ENST00000265562 PDIA4P13667 645 aaKnown RBP16.55■□□□□ 0.24
PTPN23-201ENST00000265562 DEF6Q9H4E7 631 aa16.55■□□□□ 0.24
PTPN23-201ENST00000265562 GOLGA6L10A6NI86 522 aa16.55■□□□□ 0.24
PTPN23-201ENST00000265562 TMCO3Q6UWJ1 677 aa16.55■□□□□ 0.24
PTPN23-201ENST00000265562 PDRG1Q9NUG6 133 aa16.55■□□□□ 0.24
PTPN23-201ENST00000265562 PPP6R1Q9UPN7 881 aa16.55■□□□□ 0.24
PTPN23-201ENST00000265562 HSP90AB2PQ58FF8 381 aa16.55■□□□□ 0.24
PTPN23-201ENST00000265562 C20orf194Q5TEA3 1177 aa16.55■□□□□ 0.24
PTPN23-201ENST00000265562 UPF3BQ9BZI7 483 aaKnown RBP16.55■□□□□ 0.24
PTPN23-201ENST00000265562 TNPO1Q92973 898 aaKnown RBP16.54■□□□□ 0.24
PTPN23-201ENST00000265562 GAS2L2Q8NHY3 880 aa16.54■□□□□ 0.24
PTPN23-201ENST00000265562 ERICH3Q5RHP9 1530 aa16.54■□□□□ 0.24
PTPN23-201ENST00000265562 PTPN14Q15678 1187 aa16.53■□□□□ 0.24
PTPN23-201ENST00000265562 ERBINQ96RT1 1412 aa16.53■□□□□ 0.24
PTPN23-201ENST00000265562 TXLNAP40222 546 aa16.53■□□□□ 0.24
PTPN23-201ENST00000265562 MCM5P33992 734 aa16.53■□□□□ 0.24
PTPN23-201ENST00000265562 BLOC1S2Q6QNY1 142 aa16.53■□□□□ 0.24
PTPN23-201ENST00000265562 CFTRP13569 1480 aa16.53■□□□□ 0.24
PTPN23-201ENST00000265562 AQRO60306 1485 aaKnown RBP eCLIP16.53■□□□□ 0.245e-7■■■■■ 29
PTPN23-201ENST00000265562 CCDC183Q5T5S1 534 aa16.53■□□□□ 0.24
PTPN23-201ENST00000265562 CCDC102AQ96A19 550 aa16.53■□□□□ 0.24
PTPN23-201ENST00000265562 RPAP2Q8IXW5 612 aaPredicted RBP16.52■□□□□ 0.24
PTPN23-201ENST00000265562 ODF2Q5BJF6 829 aa16.52■□□□□ 0.24
PTPN23-201ENST00000265562 ZNF428Q96B54 188 aa16.52■□□□□ 0.24
PTPN23-201ENST00000265562 ZMYND15Q9H091 742 aa16.52■□□□□ 0.24
PTPN23-201ENST00000265562 CGNQ9P2M7 1197 aaKnown RBP16.52■□□□□ 0.23
PTPN23-201ENST00000265562 SSFA2P28290 1259 aa16.52■□□□□ 0.23
PTPN23-201ENST00000265562 CCDC181Q5TID7 509 aa16.52■□□□□ 0.23
PTPN23-201ENST00000265562 TMEM57Q8N5G2 664 aa16.52■□□□□ 0.23
PTPN23-201ENST00000265562 JAKMIP1Q96N16 626 aaKnown RBP16.52■□□□□ 0.23
PTPN23-201ENST00000265562 SMTNL1A8MU46 457 aa16.51■□□□□ 0.23
PTPN23-201ENST00000265562 MAP4K4O95819 1239 aaPredicted RBP16.51■□□□□ 0.23
PTPN23-201ENST00000265562 MAPK8IP2Q13387 824 aaPredicted RBP16.51■□□□□ 0.23
PTPN23-201ENST00000265562 ERLIN2O94905 339 aa16.51■□□□□ 0.23
PTPN23-201ENST00000265562 SLC12A5Q9H2X9 1139 aa16.51■□□□□ 0.23
PTPN23-201ENST00000265562 CYB5RLQ6IPT4 315 aa16.51■□□□□ 0.23
PTPN23-201ENST00000265562 TBC1D2BQ9UPU7 963 aa16.51■□□□□ 0.23
PTPN23-201ENST00000265562 KIF18AQ8NI77 898 aa16.5■□□□□ 0.23
PTPN23-201ENST00000265562 TRIM34Q9BYJ4 488 aa16.5■□□□□ 0.23
PTPN23-201ENST00000265562 CALCOCO1Q9P1Z2 691 aa16.5■□□□□ 0.23
PTPN23-201ENST00000265562 GOLGA6L7A0A1B0GV03 622 aa16.5■□□□□ 0.23
PTPN23-201ENST00000265562 PLCD4Q9BRC7 762 aa16.5■□□□□ 0.23
PTPN23-201ENST00000265562 DYNC1I1O14576 645 aa16.49■□□□□ 0.23
PTPN23-201ENST00000265562 IQCEQ6IPM2 695 aa16.49■□□□□ 0.23
PTPN23-201ENST00000265562 CCDC43Q96MW1 224 aaKnown RBP16.49■□□□□ 0.23
PTPN23-201ENST00000265562 GRIN2BQ13224 1484 aa16.49■□□□□ 0.23
PTPN23-201ENST00000265562 LUC7LQ9NQ29 371 aaKnown RBP16.49■□□□□ 0.23
PTPN23-201ENST00000265562 PLEKHH2Q8IVE3 1493 aa16.49■□□□□ 0.23
PTPN23-201ENST00000265562 CLCN1P35523 988 aa16.49■□□□□ 0.23
PTPN23-201ENST00000265562 CAMK4Q16566 473 aa16.49■□□□□ 0.23
PTPN23-201ENST00000265562 FAM193AP78312 1265 aa16.48■□□□□ 0.23
PTPN23-201ENST00000265562 RAPGEF4Q8WZA2 1011 aa16.48■□□□□ 0.23
PTPN23-201ENST00000265562 SFPQP23246 707 aaKnown RBP eCLIP16.48■□□□□ 0.23
PTPN23-201ENST00000265562 PSME1Q06323 249 aa16.48■□□□□ 0.23
PTPN23-201ENST00000265562 GBP3Q9H0R5 595 aa16.48■□□□□ 0.23
PTPN23-201ENST00000265562 TXLNBQ8N3L3 684 aa16.48■□□□□ 0.23
PTPN23-201ENST00000265562 CWC27Q6UX04 472 aaKnown RBP16.47■□□□□ 0.23
PTPN23-201ENST00000265562 USP25Q9UHP3 1055 aa16.47■□□□□ 0.23
PTPN23-201ENST00000265562 FYB1O15117 783 aa16.47■□□□□ 0.23
PTPN23-201ENST00000265562 EVA1CP58658 441 aa16.47■□□□□ 0.23
PTPN23-201ENST00000265562 PPP4R3BQ5MIZ7 849 aa16.47■□□□□ 0.23
PTPN23-201ENST00000265562 HDGFL1Q5TGJ6 251 aa16.47■□□□□ 0.23
PTPN23-201ENST00000265562 RARSP54136 660 aaKnown RBP16.46■□□□□ 0.23
PTPN23-201ENST00000265562 ZFYVE27Q5T4F4 411 aa16.46■□□□□ 0.23
PTPN23-201ENST00000265562 STIM1Q13586 685 aa16.46■□□□□ 0.23
PTPN23-201ENST00000265562 TNNT1P13805 278 aa16.46■□□□□ 0.23
PTPN23-201ENST00000265562 KRT32Q14532 448 aa16.46■□□□□ 0.23
PTPN23-201ENST00000265562 TRIM22Q8IYM9 498 aa16.46■□□□□ 0.23
PTPN23-201ENST00000265562 ZHX1Q9UKY1 873 aaPredicted RBP16.46■□□□□ 0.23
PTPN23-201ENST00000265562 NKTRP30414 1462 aaKnown RBP16.45■□□□□ 0.22
PTPN23-201ENST00000265562 ZSCAN12O43309 604 aa16.45■□□□□ 0.22
PTPN23-201ENST00000265562 CASTP20810 708 aaKnown RBP16.45■□□□□ 0.22
PTPN23-201ENST00000265562 CFAP100Q494V2 611 aa16.45■□□□□ 0.22
PTPN23-201ENST00000265562 CDK5RAP3Q96JB5 506 aa16.45■□□□□ 0.22
PTPN23-201ENST00000265562 ARHGAP29Q52LW3 1261 aa16.45■□□□□ 0.22
PTPN23-201ENST00000265562 PLEKHH1Q9ULM0 1364 aa16.45■□□□□ 0.22
PTPN23-201ENST00000265562 CENPHQ9H3R5 247 aa16.45■□□□□ 0.22
PTPN23-201ENST00000265562 EPB41L2O43491 1005 aaKnown RBP16.44■□□□□ 0.22
PTPN23-201ENST00000265562 SCAND2PQ9GZW5 306 aaPredicted RBP16.44■□□□□ 0.22
PTPN23-201ENST00000265562 CLIP2Q9UDT6 1046 aa16.44■□□□□ 0.22
PTPN23-201ENST00000265562 LRPPRCP42704 1394 aaKnown RBP16.44■□□□□ 0.22
PTPN23-201ENST00000265562 FERMT3Q86UX7 667 aa16.44■□□□□ 0.22
PTPN23-201ENST00000265562 PRIMPOLQ96LW4 560 aa16.44■□□□□ 0.22
PTPN23-201ENST00000265562 KLHL40Q2TBA0 621 aa16.44■□□□□ 0.22
PTPN23-201ENST00000265562 CCAR1Q8IX12 1150 aaKnown RBP16.44■□□□□ 0.22
PTPN23-201ENST00000265562 IL1RAPL2Q9NP60 686 aa16.43■□□□□ 0.22
PTPN23-201ENST00000265562 ANO10Q9NW15 660 aa16.43■□□□□ 0.22
PTPN23-201ENST00000265562 C11orf95C9JLR9 678 aaPredicted RBP16.43■□□□□ 0.22
PTPN23-201ENST00000265562 NLRP6P59044 892 aa16.43■□□□□ 0.22
PTPN23-201ENST00000265562 CCDC158Q5M9N0 1113 aa16.43■□□□□ 0.22
PTPN23-201ENST00000265562 SULT6B1Q6IMI4 303 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms