RNA–Protein interactions for RNA: ENST00000263735.8

EPCAM-201, Transcript of epithelial cell adhesion molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPCAM, Length 1,724 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-201ENST00000263735 LMOD2Q6P5Q4 547 aa31.46■■■□□ 2.63
EPCAM-201ENST00000263735 MAPK8IP3Q9UPT6 1336 aa31.46■■■□□ 2.63
EPCAM-201ENST00000263735 RSPH6AQ9H0K4 717 aa31.46■■■□□ 2.63
EPCAM-201ENST00000263735 ARHGEF10O15013 1369 aa31.45■■■□□ 2.62
EPCAM-201ENST00000263735 ROBO1Q9Y6N7 1651 aa31.44■■■□□ 2.62
EPCAM-201ENST00000263735 RGPD5Q99666 1765 aa31.44■■■□□ 2.62
EPCAM-201ENST00000263735 HOXC9P31274 260 aa31.44■■■□□ 2.62
EPCAM-201ENST00000263735 GTF3C3Q9Y5Q9 886 aa31.44■■■□□ 2.62
EPCAM-201ENST00000263735 SPATA31A3Q5VYP0 1347 aa31.43■■■□□ 2.62
EPCAM-201ENST00000263735 GCP02774 474 aa31.42■■■□□ 2.62
EPCAM-201ENST00000263735 SOS2Q07890 1332 aaPredicted RBP31.42■■■□□ 2.62
EPCAM-201ENST00000263735 ABCA3Q99758 1704 aa31.41■■■□□ 2.62
EPCAM-201ENST00000263735 CCDC27Q2M243 656 aa31.41■■■□□ 2.62
EPCAM-201ENST00000263735 NEFMP07197 916 aa31.4■■■□□ 2.62
EPCAM-201ENST00000263735 PRKAR2BP31323 418 aa31.39■■■□□ 2.62
EPCAM-201ENST00000263735 GOLGA2Q08379 1002 aa31.39■■■□□ 2.62
EPCAM-201ENST00000263735 PHF23Q9BUL5 403 aaPredicted RBP31.39■■■□□ 2.62
EPCAM-201ENST00000263735 RGPD2P0DJD1 1756 aa31.39■■■□□ 2.62
EPCAM-201ENST00000263735 HMOX1P09601 288 aa31.38■■■□□ 2.61
EPCAM-201ENST00000263735 IP6K1Q92551 441 aa31.38■■■□□ 2.61
EPCAM-201ENST00000263735 CDCA7LQ96GN5 454 aa31.38■■■□□ 2.61
EPCAM-201ENST00000263735 WWC1Q8IX03 1113 aa31.37■■■□□ 2.61
EPCAM-201ENST00000263735 ABCC6O95255 1503 aa31.36■■■□□ 2.61
EPCAM-201ENST00000263735 TMPOP42166 694 aaKnown RBP31.35■■■□□ 2.61
EPCAM-201ENST00000263735 ARHGEF25Q86VW2 580 aa31.35■■■□□ 2.61
EPCAM-201ENST00000263735 RRP7AQ9Y3A4 280 aaKnown RBP31.35■■■□□ 2.61
EPCAM-201ENST00000263735 AHDC1Q5TGY3 1603 aaPredicted RBP31.35■■■□□ 2.61
EPCAM-201ENST00000263735 NEUROD2Q15784 382 aa31.35■■■□□ 2.61
EPCAM-201ENST00000263735 COL18A1P39060 1754 aa31.35■■■□□ 2.61
EPCAM-201ENST00000263735 IGSF1Q8N6C5 1336 aa31.33■■■□□ 2.61
EPCAM-201ENST00000263735 KDRP35968 1356 aa31.33■■■□□ 2.61
EPCAM-201ENST00000263735 AEBP2Q6ZN18 517 aaPredicted RBP31.32■■■□□ 2.6
EPCAM-201ENST00000263735 CAMTA1Q9Y6Y1 1673 aa31.32■■■□□ 2.6
EPCAM-201ENST00000263735 FAM208AQ9UK61 1670 aaKnown RBP31.31■■■□□ 2.6
EPCAM-201ENST00000263735 SULT6B1Q6IMI4 303 aa31.31■■■□□ 2.6
EPCAM-201ENST00000263735 SLFN5Q08AF3 891 aa31.3■■■□□ 2.6
EPCAM-201ENST00000263735 WDR63Q8IWG1 891 aa31.29■■■□□ 2.6
EPCAM-201ENST00000263735 E9PSI1 815 aa31.29■■■□□ 2.6
EPCAM-201ENST00000263735 SUPT16HQ9Y5B9 1047 aaKnown RBP31.29■■■□□ 2.6
EPCAM-201ENST00000263735 DUSP27Q5VZP5 1158 aa31.27■■■□□ 2.6
EPCAM-201ENST00000263735 AEBP1Q8IUX7 1158 aa31.27■■■□□ 2.6
EPCAM-201ENST00000263735 TRMT2AQ8IZ69 625 aaKnown RBP31.27■■■□□ 2.6
EPCAM-201ENST00000263735 EYA1Q99502 592 aa31.27■■■□□ 2.6
EPCAM-201ENST00000263735 PHACTR3Q96KR7 559 aa31.27■■■□□ 2.6
EPCAM-201ENST00000263735 PLEKHG5O94827 1062 aa31.26■■■□□ 2.59
EPCAM-201ENST00000263735 RIPK4P57078 832 aa31.26■■■□□ 2.59
EPCAM-201ENST00000263735 NFE2L2Q16236 605 aa31.26■■■□□ 2.59
EPCAM-201ENST00000263735 ZBTB7CA1YPR0 619 aa31.25■■■□□ 2.59
EPCAM-201ENST00000263735 TRIM35Q9UPQ4 493 aa31.24■■■□□ 2.59
EPCAM-201ENST00000263735 PHLPP1O60346 1717 aa31.24■■■□□ 2.59
EPCAM-201ENST00000263735 CPDO75976 1380 aa31.23■■■□□ 2.59
EPCAM-201ENST00000263735 NEFLP07196 543 aa31.23■■■□□ 2.59
EPCAM-201ENST00000263735 COL22A1Q8NFW1 1626 aaPredicted RBP31.22■■■□□ 2.59
EPCAM-201ENST00000263735 LMO7Q8WWI1 1683 aa31.21■■■□□ 2.59
EPCAM-201ENST00000263735 SPINK5Q9NQ38 1064 aaPredicted RBP31.21■■■□□ 2.59
EPCAM-201ENST00000263735 ZC3H6P61129 1189 aaKnown RBP31.21■■■□□ 2.59
EPCAM-201ENST00000263735 LTV1Q96GA3 475 aaPredicted RBP31.21■■■□□ 2.59
EPCAM-201ENST00000263735 CABLES1Q8TDN4 633 aa31.2■■■□□ 2.58
EPCAM-201ENST00000263735 NCAPD2Q15021 1401 aa31.19■■■□□ 2.58
EPCAM-201ENST00000263735 LMOD3Q0VAK6 560 aa31.18■■■□□ 2.58
EPCAM-201ENST00000263735 IL16Q14005 1332 aa31.17■■■□□ 2.58
EPCAM-201ENST00000263735 RCAN3Q9UKA8 241 aa31.17■■■□□ 2.58
EPCAM-201ENST00000263735 COL16A1Q07092 1604 aaPredicted RBP31.17■■■□□ 2.58
EPCAM-201ENST00000263735 RNF123Q5XPI4 1314 aa31.16■■■□□ 2.58
EPCAM-201ENST00000263735 TOM1O60784 492 aa31.15■■■□□ 2.58
EPCAM-201ENST00000263735 ANKRD24Q8TF21 1146 aa31.15■■■□□ 2.58
EPCAM-201ENST00000263735 AXIN2Q9Y2T1 843 aa31.15■■■□□ 2.58
EPCAM-201ENST00000263735 KIAA0232Q92628 1395 aa31.14■■■□□ 2.58
EPCAM-201ENST00000263735 VIRMAQ69YN4 1812 aaKnown RBP31.14■■■□□ 2.58
EPCAM-201ENST00000263735 ERBB3P21860 1342 aa31.14■■■□□ 2.58
EPCAM-201ENST00000263735 LRRC59Q96AG4 307 aaKnown RBP31.13■■■□□ 2.57
EPCAM-201ENST00000263735 MYH16Q9H6N6 1097 aa31.13■■■□□ 2.57
EPCAM-201ENST00000263735 NBPF6Q5VWK0 638 aa31.12■■■□□ 2.57
EPCAM-201ENST00000263735 NBPF4Q96M43 638 aa31.12■■■□□ 2.57
EPCAM-201ENST00000263735 CALD1Q05682 793 aaKnown RBP31.1■■■□□ 2.57
EPCAM-201ENST00000263735 FKBP8Q14318 412 aa31.1■■■□□ 2.57
EPCAM-201ENST00000263735 HAP1P54257 671 aaPredicted RBP31.08■■■□□ 2.57
EPCAM-201ENST00000263735 GAS2L2Q8NHY3 880 aa31.08■■■□□ 2.57
EPCAM-201ENST00000263735 USHBP1Q8N6Y0 703 aa31.07■■■□□ 2.56
EPCAM-201ENST00000263735 LRRC37A3O60309 1634 aa31.07■■■□□ 2.56
EPCAM-201ENST00000263735 MTHFSDQ2M296 383 aaKnown RBP31.05■■■□□ 2.56
EPCAM-201ENST00000263735 CHRNA2Q15822 529 aa31.04■■■□□ 2.56
EPCAM-201ENST00000263735 PRDM11Q9NQV5 511 aa31.04■■■□□ 2.56
EPCAM-201ENST00000263735 COL14A1Q05707 1796 aaKnown RBP31.04■■■□□ 2.56
EPCAM-201ENST00000263735 FANCIQ9NVI1 1328 aa31.03■■■□□ 2.56
EPCAM-201ENST00000263735 RRP1P56182 461 aaKnown RBP31.01■■■□□ 2.55
EPCAM-201ENST00000263735 IFT57Q9NWB7 429 aa31■■■□□ 2.55
EPCAM-201ENST00000263735 COL5A2P05997 1499 aaPredicted RBP30.99■■■□□ 2.55
EPCAM-201ENST00000263735 FAM83GA6ND36 823 aa30.99■■■□□ 2.55
EPCAM-201ENST00000263735 PARP4Q9UKK3 1724 aaKnown RBP30.99■■■□□ 2.55
EPCAM-201ENST00000263735 PLEKHG2Q9H7P9 1386 aa30.99■■■□□ 2.55
EPCAM-201ENST00000263735 HTATSF1O43719 755 aaKnown RBP30.98■■■□□ 2.55
EPCAM-201ENST00000263735 GNAI1P63096 354 aa30.98■■■□□ 2.55
EPCAM-201ENST00000263735 UBAP1LF5GYI3 381 aa30.98■■■□□ 2.55
EPCAM-201ENST00000263735 TSR2Q969E8 191 aaKnown RBP30.98■■■□□ 2.55
EPCAM-201ENST00000263735 THUMPD2Q9BTF0 503 aaKnown RBP30.98■■■□□ 2.55
EPCAM-201ENST00000263735 PKD1L3Q7Z443 1732 aa30.98■■■□□ 2.55
EPCAM-201ENST00000263735 PIP4K2BP78356 416 aa30.97■■■□□ 2.55
EPCAM-201ENST00000263735 ERICH6BQ5W0A0 696 aa30.97■■■□□ 2.55
EPCAM-201ENST00000263735 MAP3K5Q99683 1374 aa30.97■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms