RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 CCDC27Q2M243 656 aa17.12■□□□□ 0.33
VAMP7-201ENST00000262640 GCP02774 474 aa17.11■□□□□ 0.33
VAMP7-201ENST00000262640 PRKAR2BP31323 418 aa17.11■□□□□ 0.33
VAMP7-201ENST00000262640 CDCA7LQ96GN5 454 aa17.11■□□□□ 0.33
VAMP7-201ENST00000262640 SPATA31A3Q5VYP0 1347 aa17.11■□□□□ 0.33
VAMP7-201ENST00000262640 ARHGEF10O15013 1369 aa17.11■□□□□ 0.33
VAMP7-201ENST00000262640 PHF23Q9BUL5 403 aaPredicted RBP17.1■□□□□ 0.33
VAMP7-201ENST00000262640 HMOX1P09601 288 aa17.1■□□□□ 0.33
VAMP7-201ENST00000262640 WWC1Q8IX03 1113 aa17.1■□□□□ 0.33
VAMP7-201ENST00000262640 RRP7AQ9Y3A4 280 aaKnown RBP17.1■□□□□ 0.33
VAMP7-201ENST00000262640 PHRF1Q9P1Y6 1649 aaKnown RBP17.1■□□□□ 0.33
VAMP7-201ENST00000262640 IP6K1Q92551 441 aa17.09■□□□□ 0.33
VAMP7-201ENST00000262640 RGPD1P0DJD0 1748 aa17.09■□□□□ 0.33
VAMP7-201ENST00000262640 SOS2Q07890 1332 aaPredicted RBP17.09■□□□□ 0.33
VAMP7-201ENST00000262640 TMPOP42166 694 aaKnown RBP17.09■□□□□ 0.33
VAMP7-201ENST00000262640 NEUROD2Q15784 382 aa17.09■□□□□ 0.33
VAMP7-201ENST00000262640 LTN1O94822 1766 aa17.08■□□□□ 0.33
VAMP7-201ENST00000262640 MED1Q15648 1581 aaPredicted RBP17.08■□□□□ 0.32
VAMP7-201ENST00000262640 ARHGEF25Q86VW2 580 aa17.08■□□□□ 0.32
VAMP7-201ENST00000262640 SUPT16HQ9Y5B9 1047 aaKnown RBP17.07■□□□□ 0.32
VAMP7-201ENST00000262640 SLFN5Q08AF3 891 aa17.07■□□□□ 0.32
VAMP7-201ENST00000262640 WDR63Q8IWG1 891 aa17.07■□□□□ 0.32
VAMP7-201ENST00000262640 E9PSI1 815 aa17.06■□□□□ 0.32
VAMP7-201ENST00000262640 SULT6B1Q6IMI4 303 aa17.06■□□□□ 0.32
VAMP7-201ENST00000262640 IGSF1Q8N6C5 1336 aa17.06■□□□□ 0.32
VAMP7-201ENST00000262640 NHSL1Q5SYE7 1610 aa17.06■□□□□ 0.32
VAMP7-201ENST00000262640 NEFLP07196 543 aa17.06■□□□□ 0.32
VAMP7-201ENST00000262640 DUSP27Q5VZP5 1158 aa17.05■□□□□ 0.32
VAMP7-201ENST00000262640 TRMT2AQ8IZ69 625 aaKnown RBP17.05■□□□□ 0.32
VAMP7-201ENST00000262640 RIPK4P57078 832 aa17.04■□□□□ 0.32
VAMP7-201ENST00000262640 NFE2L2Q16236 605 aa17.04■□□□□ 0.32
VAMP7-201ENST00000262640 AEBP1Q8IUX7 1158 aa17.04■□□□□ 0.32
VAMP7-201ENST00000262640 PHACTR3Q96KR7 559 aa17.04■□□□□ 0.32
VAMP7-201ENST00000262640 KDRP35968 1356 aa17.04■□□□□ 0.32
VAMP7-201ENST00000262640 ZBTB7CA1YPR0 619 aa17.04■□□□□ 0.32
VAMP7-201ENST00000262640 PLEKHG5O94827 1062 aa17.04■□□□□ 0.32
VAMP7-201ENST00000262640 AEBP2Q6ZN18 517 aaPredicted RBP17.04■□□□□ 0.32
VAMP7-201ENST00000262640 EYA1Q99502 592 aa17.04■□□□□ 0.32
VAMP7-201ENST00000262640 TRIM35Q9UPQ4 493 aa17.03■□□□□ 0.32
VAMP7-201ENST00000262640 CRYBG1Q9Y4K1 1723 aa17.02■□□□□ 0.31
VAMP7-201ENST00000262640 LTV1Q96GA3 475 aaPredicted RBP17.01■□□□□ 0.31
VAMP7-201ENST00000262640 SPINK5Q9NQ38 1064 aaPredicted RBP17.01■□□□□ 0.31
VAMP7-201ENST00000262640 RCAN3Q9UKA8 241 aa17.01■□□□□ 0.31
VAMP7-201ENST00000262640 ABCC6O95255 1503 aa17■□□□□ 0.31
VAMP7-201ENST00000262640 IL16Q14005 1332 aa17■□□□□ 0.31
VAMP7-201ENST00000262640 ROBO1Q9Y6N7 1651 aa16.99■□□□□ 0.31
VAMP7-201ENST00000262640 ZC3H6P61129 1189 aaKnown RBP16.99■□□□□ 0.31
VAMP7-201ENST00000262640 LMOD3Q0VAK6 560 aa16.99■□□□□ 0.31
VAMP7-201ENST00000262640 CPDO75976 1380 aa16.99■□□□□ 0.31
VAMP7-201ENST00000262640 CABLES1Q8TDN4 633 aa16.99■□□□□ 0.31
VAMP7-201ENST00000262640 RNF123Q5XPI4 1314 aa16.99■□□□□ 0.31
VAMP7-201ENST00000262640 MYH16Q9H6N6 1097 aa16.98■□□□□ 0.31
VAMP7-201ENST00000262640 AHDC1Q5TGY3 1603 aaPredicted RBP16.98■□□□□ 0.31
VAMP7-201ENST00000262640 FKBP8Q14318 412 aa16.97■□□□□ 0.31
VAMP7-201ENST00000262640 ANKRD24Q8TF21 1146 aa16.97■□□□□ 0.31
VAMP7-201ENST00000262640 CALD1Q05682 793 aaKnown RBP16.96■□□□□ 0.31
VAMP7-201ENST00000262640 AXIN2Q9Y2T1 843 aa16.96■□□□□ 0.31
VAMP7-201ENST00000262640 NBPF6Q5VWK0 638 aa16.95■□□□□ 0.3
VAMP7-201ENST00000262640 NBPF4Q96M43 638 aa16.95■□□□□ 0.3
VAMP7-201ENST00000262640 TOM1O60784 492 aa16.95■□□□□ 0.3
VAMP7-201ENST00000262640 LRRC59Q96AG4 307 aaKnown RBP16.95■□□□□ 0.3
VAMP7-201ENST00000262640 KIAA0232Q92628 1395 aa16.95■□□□□ 0.3
VAMP7-201ENST00000262640 NCAPD2Q15021 1401 aa16.94■□□□□ 0.3
VAMP7-201ENST00000262640 COL18A1P39060 1754 aa16.94■□□□□ 0.3
VAMP7-201ENST00000262640 ERBB3P21860 1342 aa16.94■□□□□ 0.3
VAMP7-201ENST00000262640 GAS2L2Q8NHY3 880 aa16.94■□□□□ 0.3
VAMP7-201ENST00000262640 HAP1P54257 671 aaPredicted RBP16.93■□□□□ 0.3
VAMP7-201ENST00000262640 CAMTA1Q9Y6Y1 1673 aa16.93■□□□□ 0.3
VAMP7-201ENST00000262640 USHBP1Q8N6Y0 703 aa16.93■□□□□ 0.3
VAMP7-201ENST00000262640 ABCA3Q99758 1704 aa16.93■□□□□ 0.3
VAMP7-201ENST00000262640 RRP1P56182 461 aaKnown RBP16.92■□□□□ 0.3
VAMP7-201ENST00000262640 MTHFSDQ2M296 383 aaKnown RBP16.92■□□□□ 0.3
VAMP7-201ENST00000262640 DLG5Q8TDM6 1919 aa16.91■□□□□ 0.3
VAMP7-201ENST00000262640 FANCIQ9NVI1 1328 aa16.91■□□□□ 0.3
VAMP7-201ENST00000262640 CHRNA2Q15822 529 aa16.91■□□□□ 0.3
VAMP7-201ENST00000262640 ERICH6BQ5W0A0 696 aa16.91■□□□□ 0.3
VAMP7-201ENST00000262640 PRDM11Q9NQV5 511 aa16.91■□□□□ 0.3
VAMP7-201ENST00000262640 IFT57Q9NWB7 429 aa16.9■□□□□ 0.3
VAMP7-201ENST00000262640 LMO7Q8WWI1 1683 aa16.9■□□□□ 0.3
VAMP7-201ENST00000262640 RGPD5Q99666 1765 aa16.9■□□□□ 0.3
VAMP7-201ENST00000262640 GNAI1P63096 354 aa16.89■□□□□ 0.29
VAMP7-201ENST00000262640 RGPD2P0DJD1 1756 aa16.89■□□□□ 0.29
VAMP7-201ENST00000262640 HTATSF1O43719 755 aaKnown RBP16.89■□□□□ 0.29
VAMP7-201ENST00000262640 CT47B1P0C2W7 299 aaPredicted RBP16.89■□□□□ 0.29
VAMP7-201ENST00000262640 IRX6P78412 446 aaPredicted RBP16.89■□□□□ 0.29
VAMP7-201ENST00000262640 THUMPD2Q9BTF0 503 aaKnown RBP16.89■□□□□ 0.29
VAMP7-201ENST00000262640 FAM208AQ9UK61 1670 aaKnown RBP16.89■□□□□ 0.29
VAMP7-201ENST00000262640 FAM83GA6ND36 823 aa16.88■□□□□ 0.29
VAMP7-201ENST00000262640 TSR2Q969E8 191 aaKnown RBP16.88■□□□□ 0.29
VAMP7-201ENST00000262640 COL22A1Q8NFW1 1626 aaPredicted RBP16.88■□□□□ 0.29
VAMP7-201ENST00000262640 RTF1Q92541 710 aaKnown RBP16.88■□□□□ 0.29
VAMP7-201ENST00000262640 ZNF853P0CG23 659 aa16.87■□□□□ 0.29
VAMP7-201ENST00000262640 CSB-PGBD3P0DP91 1061 aa16.87■□□□□ 0.29
VAMP7-201ENST00000262640 PHLPP1O60346 1717 aa16.87■□□□□ 0.29
VAMP7-201ENST00000262640 UBAP1LF5GYI3 381 aa16.87■□□□□ 0.29
VAMP7-201ENST00000262640 CFAP44Q96MT7 982 aa16.87■□□□□ 0.29
VAMP7-201ENST00000262640 NLRP2Q9NX02 1062 aa16.87■□□□□ 0.29
VAMP7-201ENST00000262640 COL16A1Q07092 1604 aaPredicted RBP16.86■□□□□ 0.29
VAMP7-201ENST00000262640 GNAT3A8MTJ3 354 aa16.86■□□□□ 0.29
VAMP7-201ENST00000262640 PIP4K2BP78356 416 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms