RNA–Protein interactions for RNA: ENST00000262043.7

PHF3-201, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PHF3, Length 8,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-201ENST00000262043 HFM1A2PYH4 1435 aa12.19□□□□□ -0.46
PHF3-201ENST00000262043 TMEM132AQ24JP5 1023 aa12.19□□□□□ -0.46
PHF3-201ENST00000262043 STK38Q15208 465 aa12.18□□□□□ -0.46
PHF3-201ENST00000262043 NOM1Q5C9Z4 860 aaKnown RBP12.18□□□□□ -0.46
PHF3-201ENST00000262043 AEBP2Q6ZN18 517 aaPredicted RBP12.18□□□□□ -0.46
PHF3-201ENST00000262043 DDX54Q8TDD1 881 aaKnown RBP12.18□□□□□ -0.46
PHF3-201ENST00000262043 ANKRD1Q15327 319 aa12.18□□□□□ -0.46
PHF3-201ENST00000262043 CCAR1Q8IX12 1150 aaKnown RBP12.18□□□□□ -0.46
PHF3-201ENST00000262043 GNL3LQ9NVN8 582 aaKnown RBP12.18□□□□□ -0.46
PHF3-201ENST00000262043 FKBP4Q02790 459 aaKnown RBP eCLIP12.17□□□□□ -0.46
PHF3-201ENST00000262043 ATF7IPQ6VMQ6 1270 aa12.17□□□□□ -0.46
PHF3-201ENST00000262043 PLEKHH2Q8IVE3 1493 aa12.17□□□□□ -0.46
PHF3-201ENST00000262043 KRT18P05783 430 aaKnown RBP12.17□□□□□ -0.46
PHF3-201ENST00000262043 RRS1Q15050 365 aaKnown RBP12.17□□□□□ -0.46
PHF3-201ENST00000262043 CHD1LQ86WJ1 897 aa12.17□□□□□ -0.46
PHF3-201ENST00000262043 KRI1Q8N9T8 703 aaKnown RBP12.17□□□□□ -0.46
PHF3-201ENST00000262043 CCDC69A6NI79 296 aa12.17□□□□□ -0.46
PHF3-201ENST00000262043 MVPQ14764 893 aaKnown RBP12.17□□□□□ -0.46
PHF3-201ENST00000262043 MYO6Q9UM54 1294 aa12.17□□□□□ -0.46
PHF3-201ENST00000262043 K7ELQ4 463 aaPredicted RBP12.17□□□□□ -0.46
PHF3-201ENST00000262043 WDR63Q8IWG1 891 aa12.17□□□□□ -0.46
PHF3-201ENST00000262043 SERPINC1P01008 464 aa12.17□□□□□ -0.46
PHF3-201ENST00000262043 TOM1L2Q6ZVM7 507 aa12.17□□□□□ -0.46
PHF3-201ENST00000262043 PCF11O94913 1555 aaKnown RBP12.16□□□□□ -0.46
PHF3-201ENST00000262043 BTBD11A6QL63 1104 aa12.16□□□□□ -0.46
PHF3-201ENST00000262043 ME1P48163 572 aa12.16□□□□□ -0.46
PHF3-201ENST00000262043 PROSER2Q86WR7 435 aaPredicted RBP12.16□□□□□ -0.46
PHF3-201ENST00000262043 TNMDQ9H2S6 317 aa12.16□□□□□ -0.46
PHF3-201ENST00000262043 RTEL1-TNFRSF6BF6WH68 1400 aa12.16□□□□□ -0.46
PHF3-201ENST00000262043 CCDC57Q2TAC2 916 aa12.16□□□□□ -0.46
PHF3-201ENST00000262043 NESP48681 1621 aa12.16□□□□□ -0.46
PHF3-201ENST00000262043 DAPK1P53355 1430 aa12.16□□□□□ -0.46
PHF3-201ENST00000262043 SYCP1Q15431 976 aa12.15□□□□□ -0.46
PHF3-201ENST00000262043 AEBP1Q8IUX7 1158 aa12.15□□□□□ -0.46
PHF3-201ENST00000262043 ZNF692Q9BU19 519 aaPredicted RBP12.15□□□□□ -0.46
PHF3-201ENST00000262043 KIF14Q15058 1648 aa12.15□□□□□ -0.46
PHF3-201ENST00000262043 CCP110O43303 1012 aa12.15□□□□□ -0.46
PHF3-201ENST00000262043 CCDC192P0DO97 292 aa12.15□□□□□ -0.46
PHF3-201ENST00000262043 AACSQ86V21 672 aa12.15□□□□□ -0.46
PHF3-201ENST00000262043 CWC27Q6UX04 472 aaKnown RBP12.15□□□□□ -0.46
PHF3-201ENST00000262043 NBPF8Q3BBV2 869 aa12.15□□□□□ -0.46
PHF3-201ENST00000262043 ERCC4Q92889 916 aaPredicted RBP12.15□□□□□ -0.46
PHF3-201ENST00000262043 ZNF530Q6P9A1 599 aaPredicted RBP12.15□□□□□ -0.46
PHF3-201ENST00000262043 CDK13Q14004 1512 aaKnown RBP12.15□□□□□ -0.47
PHF3-201ENST00000262043 MAP7D2Q96T17 732 aa12.15□□□□□ -0.47
PHF3-201ENST00000262043 CUL7Q14999 1698 aa12.14□□□□□ -0.47
PHF3-201ENST00000262043 JMYQ8N9B5 988 aa12.14□□□□□ -0.47
PHF3-201ENST00000262043 TRIM22Q8IYM9 498 aa12.14□□□□□ -0.47
PHF3-201ENST00000262043 NUP133Q8WUM0 1156 aa12.14□□□□□ -0.47
PHF3-201ENST00000262043 MPHOSPH8Q99549 860 aa12.14□□□□□ -0.47
PHF3-201ENST00000262043 BRPF3Q9ULD4 1205 aa12.14□□□□□ -0.47
PHF3-201ENST00000262043 WDR33Q9C0J8 1336 aaKnown RBP12.14□□□□□ -0.47
PHF3-201ENST00000262043 SRCIN1Q9C0H9 1055 aa12.14□□□□□ -0.47
PHF3-201ENST00000262043 RDXP35241 583 aaKnown RBP12.14□□□□□ -0.47
PHF3-201ENST00000262043 LARP1BQ659C4 914 aaKnown RBP12.14□□□□□ -0.47
PHF3-201ENST00000262043 PNISRQ8TF01 805 aaKnown RBP12.14□□□□□ -0.47
PHF3-201ENST00000262043 SPG7Q9UQ90 795 aa12.14□□□□□ -0.47
PHF3-201ENST00000262043 SRGAP3O43295 1099 aa12.13□□□□□ -0.47
PHF3-201ENST00000262043 NACAP1Q9BZK3 213 aa12.13□□□□□ -0.47
PHF3-201ENST00000262043 SPINK5Q9NQ38 1064 aaPredicted RBP12.13□□□□□ -0.47
PHF3-201ENST00000262043 MRC2Q9UBG0 1479 aa12.13□□□□□ -0.47
PHF3-201ENST00000262043 BACH2Q9BYV9 841 aa12.13□□□□□ -0.47
PHF3-201ENST00000262043 PPP1R1BQ9UD71 204 aaPredicted RBP12.13□□□□□ -0.47
PHF3-201ENST00000262043 CT47B1P0C2W7 299 aaPredicted RBP12.13□□□□□ -0.47
PHF3-201ENST00000262043 WWC2Q6AWC2 1192 aa12.13□□□□□ -0.47
PHF3-201ENST00000262043 ZHX3Q9H4I2 956 aa12.13□□□□□ -0.47
PHF3-201ENST00000262043 NSD3Q9BZ95 1437 aa12.13□□□□□ -0.47
PHF3-201ENST00000262043 MTERF4Q7Z6M4 381 aaKnown RBP12.13□□□□□ -0.47
PHF3-201ENST00000262043 MPNDQ8N594 471 aa12.13□□□□□ -0.47
PHF3-201ENST00000262043 ZNHIT6Q9NWK9 470 aaKnown RBP12.13□□□□□ -0.47
PHF3-201ENST00000262043 SNAPC4Q5SXM2 1469 aa12.13□□□□□ -0.47
PHF3-201ENST00000262043 KRT85P78386 507 aa12.13□□□□□ -0.47
PHF3-201ENST00000262043 FAM135AQ9P2D6 1515 aa12.12□□□□□ -0.47
PHF3-201ENST00000262043 STIM1Q13586 685 aa12.12□□□□□ -0.47
PHF3-201ENST00000262043 FAM177A1Q8N128 213 aaPredicted RBP12.12□□□□□ -0.47
PHF3-201ENST00000262043 CWC15Q9P013 229 aaKnown RBP12.12□□□□□ -0.47
PHF3-201ENST00000262043 H0YHG0 523 aa12.12□□□□□ -0.47
PHF3-201ENST00000262043 DCTN1Q14203 1278 aa12.12□□□□□ -0.47
PHF3-201ENST00000262043 PPFIBP1Q86W92 1011 aa12.12□□□□□ -0.47
PHF3-201ENST00000262043 NUTM2BA6NNL0 878 aaPredicted RBP12.11□□□□□ -0.47
PHF3-201ENST00000262043 NUTM2EB1AL46 878 aaPredicted RBP12.11□□□□□ -0.47
PHF3-201ENST00000262043 RBM10P98175 930 aaKnown RBP12.11□□□□□ -0.47
PHF3-201ENST00000262043 NUTM2AQ8IVF1 878 aaPredicted RBP12.11□□□□□ -0.47
PHF3-201ENST00000262043 RBM5P52756 815 aaKnown RBP eCLIP12.11□□□□□ -0.47
PHF3-201ENST00000262043 THEMISQ8N1K5 641 aaPredicted RBP12.11□□□□□ -0.47
PHF3-201ENST00000262043 ZSCAN25Q6NSZ9 544 aa12.11□□□□□ -0.47
PHF3-201ENST00000262043 BLOC1S2Q6QNY1 142 aa12.11□□□□□ -0.47
PHF3-201ENST00000262043 TOPBP1Q92547 1522 aa12.11□□□□□ -0.47
PHF3-201ENST00000262043 JAKMIP1Q96N16 626 aaKnown RBP12.11□□□□□ -0.47
PHF3-201ENST00000262043 DEF6Q9H4E7 631 aa12.11□□□□□ -0.47
PHF3-201ENST00000262043 IQGAP2Q13576 1575 aa12.11□□□□□ -0.47
PHF3-201ENST00000262043 PDRG1Q9NUG6 133 aa12.11□□□□□ -0.47
PHF3-201ENST00000262043 DACH1Q9UI36 760 aa12.11□□□□□ -0.47
PHF3-201ENST00000262043 NCAPD3P42695 1498 aa12.11□□□□□ -0.47
PHF3-201ENST00000262043 PIP4K2AP48426 406 aaPredicted RBP12.11□□□□□ -0.47
PHF3-201ENST00000262043 TANGO6Q9C0B7 1094 aa12.1□□□□□ -0.47
PHF3-201ENST00000262043 DNMBPQ6XZF7 1577 aa12.1□□□□□ -0.47
PHF3-201ENST00000262043 TDO2P48775 406 aa12.1□□□□□ -0.47
PHF3-201ENST00000262043 AXDND1Q5T1B0 1012 aaPredicted RBP12.1□□□□□ -0.47
PHF3-201ENST00000262043 MIS18AQ9NYP9 233 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms