RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 CPA1P15085 419 aa12.26□□□□□ -0.45
PALB2-201ENST00000261584 RBM33Q96EV2 1170 aaKnown RBP12.26□□□□□ -0.45
PALB2-201ENST00000261584 ZMYM4Q5VZL5 1548 aa12.26□□□□□ -0.45
PALB2-201ENST00000261584 DIAPH3Q9NSV4 1193 aa12.26□□□□□ -0.45
PALB2-201ENST00000261584 ERC2O15083 957 aa12.25□□□□□ -0.45
PALB2-201ENST00000261584 TPM2P07951 284 aa12.25□□□□□ -0.45
PALB2-201ENST00000261584 HCLS1P14317 486 aaPredicted RBP12.25□□□□□ -0.45
PALB2-201ENST00000261584 BMP2KLQ5H9B9 411 aa12.25□□□□□ -0.45
PALB2-201ENST00000261584 FMNL2Q96PY5 1086 aa12.25□□□□□ -0.45
PALB2-201ENST00000261584 TRIM35Q9UPQ4 493 aa12.25□□□□□ -0.45
PALB2-201ENST00000261584 SPG7Q9UQ90 795 aa12.25□□□□□ -0.45
PALB2-201ENST00000261584 KIF14Q15058 1648 aa12.25□□□□□ -0.45
PALB2-201ENST00000261584 ZNF771Q7L3S4 317 aaPredicted RBP12.25□□□□□ -0.45
PALB2-201ENST00000261584 SIL1Q9H173 461 aa12.25□□□□□ -0.45
PALB2-201ENST00000261584 GRIN2AQ12879 1464 aa12.25□□□□□ -0.45
PALB2-201ENST00000261584 RAB3GAP1Q15042 981 aa12.24□□□□□ -0.45
PALB2-201ENST00000261584 BICD2Q8TD16 824 aa12.24□□□□□ -0.45
PALB2-201ENST00000261584 SCAF11Q99590 1463 aaKnown RBP12.24□□□□□ -0.45
PALB2-201ENST00000261584 ADAMTS12P58397 1594 aa12.24□□□□□ -0.45
PALB2-201ENST00000261584 IDI1Q13907 227 aa12.24□□□□□ -0.45
PALB2-201ENST00000261584 ASXL1Q8IXJ9 1541 aa12.24□□□□□ -0.45
PALB2-201ENST00000261584 KDM5CP41229 1560 aa12.23□□□□□ -0.45
PALB2-201ENST00000261584 LMOD3Q0VAK6 560 aa12.23□□□□□ -0.45
PALB2-201ENST00000261584 HDAC1Q13547 482 aaPredicted RBP12.23□□□□□ -0.45
PALB2-201ENST00000261584 NFE2L2Q16236 605 aa12.23□□□□□ -0.45
PALB2-201ENST00000261584 SMC5Q8IY18 1101 aa12.23□□□□□ -0.45
PALB2-201ENST00000261584 CDK11BP21127 795 aaKnown RBP12.23□□□□□ -0.45
PALB2-201ENST00000261584 CKAP2LQ8IYA6 745 aa12.23□□□□□ -0.45
PALB2-201ENST00000261584 CCDC39Q9UFE4 941 aa12.23□□□□□ -0.45
PALB2-201ENST00000261584 MRC2Q9UBG0 1479 aa12.23□□□□□ -0.45
PALB2-201ENST00000261584 FOXO3O43524 673 aa12.23□□□□□ -0.45
PALB2-201ENST00000261584 GIMAP6Q6P9H5 292 aa12.23□□□□□ -0.45
PALB2-201ENST00000261584 USHBP1Q8N6Y0 703 aa12.23□□□□□ -0.45
PALB2-201ENST00000261584 UHRF1BP1Q6BDS2 1440 aa12.23□□□□□ -0.45
PALB2-201ENST00000261584 CCDC83Q8IWF9 413 aa12.22□□□□□ -0.45
PALB2-201ENST00000261584 CIZ1Q9ULV3 898 aaPredicted RBP12.22□□□□□ -0.45
PALB2-201ENST00000261584 SYCP2Q9BX26 1530 aa12.22□□□□□ -0.45
PALB2-201ENST00000261584 KLHL40Q2TBA0 621 aa12.22□□□□□ -0.45
PALB2-201ENST00000261584 TRERF1Q96PN7 1200 aa12.22□□□□□ -0.45
PALB2-201ENST00000261584 CREBRFQ8IUR6 639 aa12.21□□□□□ -0.45
PALB2-201ENST00000261584 TRMT2AQ8IZ69 625 aaKnown RBP12.21□□□□□ -0.45
PALB2-201ENST00000261584 TFIP11Q9UBB9 837 aaKnown RBP12.21□□□□□ -0.45
PALB2-201ENST00000261584 AAMPQ13685 434 aa12.21□□□□□ -0.45
PALB2-201ENST00000261584 TMX3Q96JJ7 454 aa12.21□□□□□ -0.45
PALB2-201ENST00000261584 TRAPPC8Q9Y2L5 1435 aa12.21□□□□□ -0.45
PALB2-201ENST00000261584 DISP1Q96F81 1524 aa12.21□□□□□ -0.46
PALB2-201ENST00000261584 DNMT1P26358 1616 aaKnown RBP12.21□□□□□ -0.46
PALB2-201ENST00000261584 PHF14O94880 888 aa12.21□□□□□ -0.46
PALB2-201ENST00000261584 UBTFL1P0CB47 393 aaPredicted RBP12.21□□□□□ -0.46
PALB2-201ENST00000261584 TRIM5Q9C035 493 aa12.21□□□□□ -0.46
PALB2-201ENST00000261584 C9orf78Q9NZ63 289 aaPredicted RBP12.21□□□□□ -0.46
PALB2-201ENST00000261584 VAMP4O75379 141 aa12.2□□□□□ -0.46
PALB2-201ENST00000261584 GORABQ5T7V8 394 aa12.2□□□□□ -0.46
PALB2-201ENST00000261584 FAM173BQ6P4H8 233 aa12.2□□□□□ -0.46
PALB2-201ENST00000261584 PLEKHM2Q8IWE5 1019 aa12.2□□□□□ -0.46
PALB2-201ENST00000261584 CCAR2Q8N163 923 aaKnown RBP12.2□□□□□ -0.46
PALB2-201ENST00000261584 NSFL1CQ9UNZ2 370 aaKnown RBP12.2□□□□□ -0.46
PALB2-201ENST00000261584 FCHSD2O94868 740 aa12.2□□□□□ -0.46
PALB2-201ENST00000261584 ZBTB7BO15156 539 aaPredicted RBP12.2□□□□□ -0.46
PALB2-201ENST00000261584 CYB5RLQ6IPT4 315 aa12.2□□□□□ -0.46
PALB2-201ENST00000261584 NINLQ9Y2I6 1382 aa12.19□□□□□ -0.46
PALB2-201ENST00000261584 H3BQV1 296 aa12.19□□□□□ -0.46
PALB2-201ENST00000261584 TTC22Q5TAA0 569 aa12.19□□□□□ -0.46
PALB2-201ENST00000261584 IFFO2Q5TF58 517 aa12.19□□□□□ -0.46
PALB2-201ENST00000261584 NECAB1Q8N987 351 aa12.19□□□□□ -0.46
PALB2-201ENST00000261584 DDX11Q96FC9 970 aa12.19□□□□□ -0.46
PALB2-201ENST00000261584 SLC26A8Q96RN1 970 aa12.19□□□□□ -0.46
PALB2-201ENST00000261584 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.19□□□□□ -0.46
PALB2-201ENST00000261584 CNPY2Q9Y2B0 182 aa12.19□□□□□ -0.46
PALB2-201ENST00000261584 V9GYY5 206 aaPredicted RBP12.19□□□□□ -0.46
PALB2-201ENST00000261584 TULP1O00294 542 aaPredicted RBP12.19□□□□□ -0.46
PALB2-201ENST00000261584 GADD45BO75293 160 aaPredicted RBP12.19□□□□□ -0.46
PALB2-201ENST00000261584 GSPT1P15170 499 aaKnown RBP12.19□□□□□ -0.46
PALB2-201ENST00000261584 LRRCC1Q9C099 1032 aa12.19□□□□□ -0.46
PALB2-201ENST00000261584 TMEM63CQ9P1W3 806 aa12.19□□□□□ -0.46
PALB2-201ENST00000261584 FSD2A1L4K1 749 aa12.18□□□□□ -0.46
PALB2-201ENST00000261584 G2E3Q7L622 706 aa12.18□□□□□ -0.46
PALB2-201ENST00000261584 PDCL3Q9H2J4 239 aa12.18□□□□□ -0.46
PALB2-201ENST00000261584 RAPGEF6Q8TEU7 1601 aa12.18□□□□□ -0.46
PALB2-201ENST00000261584 BECN2A8MW95 431 aa12.18□□□□□ -0.46
PALB2-201ENST00000261584 SRGAP3O43295 1099 aa12.18□□□□□ -0.46
PALB2-201ENST00000261584 GNAI2P04899 355 aa12.18□□□□□ -0.46
PALB2-201ENST00000261584 CSPP1Q1MSJ5 1256 aa12.18□□□□□ -0.46
PALB2-201ENST00000261584 FILIP1Q7Z7B0 1213 aa12.18□□□□□ -0.46
PALB2-201ENST00000261584 MRPL50Q8N5N7 158 aaKnown RBP12.18□□□□□ -0.46
PALB2-201ENST00000261584 LRRFIP2Q9Y608 721 aaKnown RBP12.18□□□□□ -0.46
PALB2-201ENST00000261584 CFAP65Q6ZU64 1925 aaKnown RBP12.18□□□□□ -0.46
PALB2-201ENST00000261584 HSP90AB2PQ58FF8 381 aa12.18□□□□□ -0.46
PALB2-201ENST00000261584 C16orf45Q96MC5 204 aaPredicted RBP12.18□□□□□ -0.46
PALB2-201ENST00000261584 ADCY5O95622 1261 aa12.17□□□□□ -0.46
PALB2-201ENST00000261584 IFIT2P09913 472 aaKnown RBP12.17□□□□□ -0.46
PALB2-201ENST00000261584 CASTP20810 708 aaKnown RBP12.17□□□□□ -0.46
PALB2-201ENST00000261584 JAKMIP1Q96N16 626 aaKnown RBP12.17□□□□□ -0.46
PALB2-201ENST00000261584 HAP1P54257 671 aaPredicted RBP12.17□□□□□ -0.46
PALB2-201ENST00000261584 MBD3O95983 291 aa12.17□□□□□ -0.46
PALB2-201ENST00000261584 POLKQ9UBT6 870 aa12.17□□□□□ -0.46
PALB2-201ENST00000261584 NLRP6P59044 892 aa12.16□□□□□ -0.46
PALB2-201ENST00000261584 EIF4G3O43432 1585 aaKnown RBP12.16□□□□□ -0.46
PALB2-201ENST00000261584 ERICH4A6NGS2 130 aa12.16□□□□□ -0.46
PALB2-201ENST00000261584 USP48Q86UV5 1035 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms