RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 PPRC1Q5VV67 1664 aaKnown RBP8.85□□□□□ -0.99
CSDE1-201ENST00000261443 MTHFSP49914 203 aa8.85□□□□□ -0.99
CSDE1-201ENST00000261443 MPNDQ8N594 471 aa8.85□□□□□ -0.99
CSDE1-201ENST00000261443 PIBF1Q8WXW3 757 aa8.85□□□□□ -0.99
CSDE1-201ENST00000261443 TSPY26PQ9H489 355 aa8.85□□□□□ -0.99
CSDE1-201ENST00000261443 ABCA6Q8N139 1617 aa8.85□□□□□ -0.99
CSDE1-201ENST00000261443 MBD3O95983 291 aa8.84□□□□□ -0.99
CSDE1-201ENST00000261443 U2AF1L5P0DN76 240 aaPredicted RBP8.84□□□□□ -0.99
CSDE1-201ENST00000261443 U2AF1Q01081 240 aaKnown RBP eCLIP8.84□□□□□ -0.99
CSDE1-201ENST00000261443 PDCL2Q8N4E4 241 aa8.84□□□□□ -0.99
CSDE1-201ENST00000261443 GCC1Q96CN9 775 aa8.84□□□□□ -0.99
CSDE1-201ENST00000261443 FRMPD1Q5SYB0 1578 aa8.84□□□□□ -0.99
CSDE1-201ENST00000261443 ZGPATQ8N5A5 531 aaKnown RBP8.84□□□□□ -0.99
CSDE1-201ENST00000261443 ZNF830Q96NB3 372 aaPredicted RBP8.84□□□□□ -0.99
CSDE1-201ENST00000261443 ERVK-7P63135 1459 aa8.84□□□□□ -0.99
CSDE1-201ENST00000261443 NEURL4Q96JN8 1562 aa8.84□□□□□ -0.99
CSDE1-201ENST00000261443 TAF3Q5VWG9 929 aa8.84□□□□□ -0.99
CSDE1-201ENST00000261443 CHAMP1Q96JM3 812 aa8.84□□□□□ -0.99
CSDE1-201ENST00000261443 BCL2L12Q9HB09 334 aa8.84□□□□□ -0.99
CSDE1-201ENST00000261443 KIAA1210Q9ULL0 1709 aa8.83□□□□□ -1
CSDE1-201ENST00000261443 NCBP3Q53F19 620 aaKnown RBP8.83□□□□□ -1
CSDE1-201ENST00000261443 FOXD4L5Q5VV16 416 aaPredicted RBP8.83□□□□□ -1
CSDE1-201ENST00000261443 FOXD4L4Q8WXT5 416 aaPredicted RBP8.83□□□□□ -1
CSDE1-201ENST00000261443 ZDHHC9Q9Y397 364 aa8.83□□□□□ -1
CSDE1-201ENST00000261443 IGSF3O75054 1194 aa8.83□□□□□ -1
CSDE1-201ENST00000261443 NAP1L2Q9ULW6 460 aaPredicted RBP8.83□□□□□ -1
CSDE1-201ENST00000261443 NSD3Q9BZ95 1437 aa8.83□□□□□ -1
CSDE1-201ENST00000261443 ST18O60284 1047 aa8.82□□□□□ -1
CSDE1-201ENST00000261443 FANCAO15360 1455 aa8.82□□□□□ -1
CSDE1-201ENST00000261443 C17orf53Q8N3J3 647 aaPredicted RBP8.82□□□□□ -1
CSDE1-201ENST00000261443 TMEM51Q9NW97 253 aa8.82□□□□□ -1
CSDE1-201ENST00000261443 ZNF518AQ6AHZ1 1483 aa8.82□□□□□ -1
CSDE1-201ENST00000261443 SYAP1Q96A49 352 aaPredicted RBP8.82□□□□□ -1
CSDE1-201ENST00000261443 BCL11BQ9C0K0 894 aaPredicted RBP8.82□□□□□ -1
CSDE1-201ENST00000261443 TTC12Q9H892 705 aaPredicted RBP8.82□□□□□ -1
CSDE1-201ENST00000261443 MAP3K4Q9Y6R4 1608 aa8.82□□□□□ -1
CSDE1-201ENST00000261443 NOS1P29475 1434 aa8.82□□□□□ -1
CSDE1-201ENST00000261443 RIMBP3CA6NJZ7 1639 aa8.81□□□□□ -1
CSDE1-201ENST00000261443 RIMBP3BA6NNM3 1639 aa8.81□□□□□ -1
CSDE1-201ENST00000261443 RIMBP3Q9UFD9 1639 aa8.81□□□□□ -1
CSDE1-201ENST00000261443 U2AF2P26368 475 aaKnown RBP eCLIP8.81□□□□□ -12e-12■■■■□ 24.2
CSDE1-201ENST00000261443 FKBP5Q13451 457 aaPredicted RBP8.81□□□□□ -1
CSDE1-201ENST00000261443 ZNF771Q7L3S4 317 aaPredicted RBP8.81□□□□□ -1
CSDE1-201ENST00000261443 CFAP44Q96MT7 982 aa8.81□□□□□ -1
CSDE1-201ENST00000261443 C1orf115Q9H7X2 142 aa8.81□□□□□ -1
CSDE1-201ENST00000261443 PPIP5K1Q6PFW1 1433 aa8.81□□□□□ -1
CSDE1-201ENST00000261443 SIGLEC1Q9BZZ2 1709 aa8.81□□□□□ -1
CSDE1-201ENST00000261443 NRXN1Q9ULB1 1477 aa8.81□□□□□ -1
CSDE1-201ENST00000261443 EFCAB6Q5THR3 1501 aa8.81□□□□□ -1
CSDE1-201ENST00000261443 USP26Q9BXU7 913 aa8.81□□□□□ -1
CSDE1-201ENST00000261443 CGNQ9P2M7 1197 aaKnown RBP8.81□□□□□ -1
CSDE1-201ENST00000261443 ABCC11Q96J66 1382 aa8.81□□□□□ -1
CSDE1-201ENST00000261443 ZC3H13Q5T200 1668 aaKnown RBP8.81□□□□□ -1
CSDE1-201ENST00000261443 CHAF1AQ13111 956 aaPredicted RBP8.8□□□□□ -1
CSDE1-201ENST00000261443 EFCAB2Q5VUJ9 269 aa8.8□□□□□ -1
CSDE1-201ENST00000261443 GSPT1P15170 499 aaKnown RBP8.8□□□□□ -1
CSDE1-201ENST00000261443 CHMP4BQ9H444 224 aaKnown RBP8.8□□□□□ -1
CSDE1-201ENST00000261443 DIAPH3Q9NSV4 1193 aa8.8□□□□□ -1
CSDE1-201ENST00000261443 SPTLC3Q9NUV7 552 aa8.8□□□□□ -1
CSDE1-201ENST00000261443 USP25Q9UHP3 1055 aa8.8□□□□□ -1
CSDE1-201ENST00000261443 MYO3AQ8NEV4 1616 aa8.8□□□□□ -1
CSDE1-201ENST00000261443 PHF14O94880 888 aa8.8□□□□□ -1
CSDE1-201ENST00000261443 CFAP70Q5T0N1 1121 aa8.8□□□□□ -1
CSDE1-201ENST00000261443 ZBTB7BO15156 539 aaPredicted RBP8.79□□□□□ -1
CSDE1-201ENST00000261443 TMPOP42166 694 aaKnown RBP8.79□□□□□ -1
CSDE1-201ENST00000261443 UVSSAQ2YD98 709 aa8.79□□□□□ -1
CSDE1-201ENST00000261443 ADCY5O95622 1261 aa8.79□□□□□ -1
CSDE1-201ENST00000261443 INTS3Q68E01 1043 aaKnown RBP8.79□□□□□ -1
CSDE1-201ENST00000261443 FAM184AQ8NB25 1140 aa8.79□□□□□ -1
CSDE1-201ENST00000261443 SLC12A5Q9H2X9 1139 aa8.79□□□□□ -1
CSDE1-201ENST00000261443 ADGRL1O94910 1474 aa8.79□□□□□ -1
CSDE1-201ENST00000261443 RIOK3O14730 519 aaKnown RBP8.78□□□□□ -1
CSDE1-201ENST00000261443 ANKRD7Q92527 254 aa8.78□□□□□ -1
CSDE1-201ENST00000261443 FEZ1Q99689 392 aa8.78□□□□□ -1
CSDE1-201ENST00000261443 TRIM35Q9UPQ4 493 aa8.78□□□□□ -1
CSDE1-201ENST00000261443 ASXL2Q76L83 1435 aa8.78□□□□□ -1
CSDE1-201ENST00000261443 ADGRB2O60241 1585 aa8.78□□□□□ -1
CSDE1-201ENST00000261443 CDK11BP21127 795 aaKnown RBP8.78□□□□□ -1
CSDE1-201ENST00000261443 ALDH1L2Q3SY69 923 aa8.78□□□□□ -1
CSDE1-201ENST00000261443 SPAG9O60271 1321 aaKnown RBP8.78□□□□□ -1
CSDE1-201ENST00000261443 LMTK2Q8IWU2 1503 aa8.78□□□□□ -1
CSDE1-201ENST00000261443 VGLL3A8MV65 326 aa8.78□□□□□ -1
CSDE1-201ENST00000261443 U2SURPO15042 1029 aaKnown RBP8.78□□□□□ -1
CSDE1-201ENST00000261443 IPO4Q8TEX9 1081 aaKnown RBP8.78□□□□□ -1
CSDE1-201ENST00000261443 MYOM2P54296 1465 aa8.78□□□□□ -1
CSDE1-201ENST00000261443 ADGRB3O60242 1522 aa8.78□□□□□ -1
CSDE1-201ENST00000261443 REREQ9P2R6 1566 aa8.78□□□□□ -1
CSDE1-201ENST00000261443 CASC1Q6TDU7 716 aa8.77□□□□□ -1.01
CSDE1-201ENST00000261443 PLEKHM2Q8IWE5 1019 aa8.77□□□□□ -1.01
CSDE1-201ENST00000261443 SIRT2Q8IXJ6 389 aa8.77□□□□□ -1.01
CSDE1-201ENST00000261443 OGFRQ9NZT2 677 aa8.77□□□□□ -1.01
CSDE1-201ENST00000261443 IL16Q14005 1332 aa8.77□□□□□ -1.01
CSDE1-201ENST00000261443 PPLO60437 1756 aa8.77□□□□□ -1.01
CSDE1-201ENST00000261443 KIF1BO60333 1816 aa8.77□□□□□ -1.01
CSDE1-201ENST00000261443 TTC22Q5TAA0 569 aa8.77□□□□□ -1.01
CSDE1-201ENST00000261443 ZBTB22O15209 634 aa8.76□□□□□ -1.01
CSDE1-201ENST00000261443 PDIA4P13667 645 aaKnown RBP8.76□□□□□ -1.01
CSDE1-201ENST00000261443 ADGRB1O14514 1584 aa8.76□□□□□ -1.01
CSDE1-201ENST00000261443 MED14O60244 1454 aa8.76□□□□□ -1.01
CSDE1-201ENST00000261443 CD109Q6YHK3 1445 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms