RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 CYB5RLQ6IPT4 315 aa9.33□□□□□ -0.92
GPNMB-201ENST00000258733 TMX4Q9H1E5 349 aaPredicted RBP9.33□□□□□ -0.92
GPNMB-201ENST00000258733 PNMA2Q9UL42 364 aa9.33□□□□□ -0.92
GPNMB-201ENST00000258733 IL16Q14005 1332 aa9.33□□□□□ -0.92
GPNMB-201ENST00000258733 PPFIA2O75334 1257 aa9.33□□□□□ -0.92
GPNMB-201ENST00000258733 SETSIPP0DME0 302 aa9.33□□□□□ -0.92
GPNMB-201ENST00000258733 AMOTQ4VCS5 1084 aa9.33□□□□□ -0.92
GPNMB-201ENST00000258733 PRPF38AQ8NAV1 312 aaKnown RBP9.33□□□□□ -0.92
GPNMB-201ENST00000258733 GAS2L2Q8NHY3 880 aa9.33□□□□□ -0.92
GPNMB-201ENST00000258733 GOLGA6L22H0YM25 854 aa9.32□□□□□ -0.92
GPNMB-201ENST00000258733 KINO60870 393 aaKnown RBP9.32□□□□□ -0.92
GPNMB-201ENST00000258733 C10orf67Q8IYJ2 551 aa9.32□□□□□ -0.92
GPNMB-201ENST00000258733 ANKRD20A12PQ8NF67 263 aa9.32□□□□□ -0.92
GPNMB-201ENST00000258733 SUN2Q9UH99 717 aa9.32□□□□□ -0.92
GPNMB-201ENST00000258733 SYNPO2Q9UMS6 1093 aa9.32□□□□□ -0.92
GPNMB-201ENST00000258733 MCM4P33991 863 aa9.32□□□□□ -0.92
GPNMB-201ENST00000258733 MAGEA8P43361 318 aa9.32□□□□□ -0.92
GPNMB-201ENST00000258733 LONRF3Q496Y0 759 aa9.32□□□□□ -0.92
GPNMB-201ENST00000258733 TATDN2Q93075 761 aa9.32□□□□□ -0.92
GPNMB-201ENST00000258733 BCL2L12Q9HB09 334 aa9.32□□□□□ -0.92
GPNMB-201ENST00000258733 RUSC2Q8N2Y8 1516 aa9.31□□□□□ -0.92
GPNMB-201ENST00000258733 ZRANB2O95218 330 aaKnown RBP eCLIP9.31□□□□□ -0.92
GPNMB-201ENST00000258733 OATP04181 439 aa9.31□□□□□ -0.92
GPNMB-201ENST00000258733 NOLC1Q14978 699 aaKnown RBP eCLIP9.31□□□□□ -0.92
GPNMB-201ENST00000258733 DZIP3Q86Y13 1208 aaKnown RBP9.31□□□□□ -0.92
GPNMB-201ENST00000258733 C22orf23Q9BZE7 217 aa9.31□□□□□ -0.92
GPNMB-201ENST00000258733 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.31□□□□□ -0.92
GPNMB-201ENST00000258733 PEX14O75381 377 aa9.31□□□□□ -0.92
GPNMB-201ENST00000258733 IRX1P78414 480 aaPredicted RBP9.31□□□□□ -0.92
GPNMB-201ENST00000258733 ZKSCAN5Q9Y2L8 839 aa9.31□□□□□ -0.92
GPNMB-201ENST00000258733 RNF123Q5XPI4 1314 aa9.31□□□□□ -0.92
GPNMB-201ENST00000258733 MYO1CO00159 1063 aa9.3□□□□□ -0.92
GPNMB-201ENST00000258733 CDC37Q16543 378 aaPredicted RBP9.3□□□□□ -0.92
GPNMB-201ENST00000258733 RIOK3O14730 519 aaKnown RBP9.3□□□□□ -0.92
GPNMB-201ENST00000258733 BMS1Q14692 1282 aaKnown RBP9.3□□□□□ -0.92
GPNMB-201ENST00000258733 E2F4Q16254 413 aa9.3□□□□□ -0.92
GPNMB-201ENST00000258733 GPBP1L1Q9HC44 474 aaPredicted RBP9.3□□□□□ -0.92
GPNMB-201ENST00000258733 POLKQ9UBT6 870 aa9.3□□□□□ -0.92
GPNMB-201ENST00000258733 PCDHGA4Q9Y5G9 962 aa9.3□□□□□ -0.92
GPNMB-201ENST00000258733 A0A1B0GUL7 405 aa9.3□□□□□ -0.92
GPNMB-201ENST00000258733 ADCY2Q08462 1091 aa9.3□□□□□ -0.92
GPNMB-201ENST00000258733 AP1ARQ63HQ0 302 aa9.3□□□□□ -0.92
GPNMB-201ENST00000258733 FMNL2Q96PY5 1086 aa9.3□□□□□ -0.92
GPNMB-201ENST00000258733 RBM47A0AV96 593 aaKnown RBP9.29□□□□□ -0.92
GPNMB-201ENST00000258733 HSP90AB2PQ58FF8 381 aa9.29□□□□□ -0.92
GPNMB-201ENST00000258733 MAMSTRQ6ZN01 415 aa9.29□□□□□ -0.92
GPNMB-201ENST00000258733 ANKRD7Q92527 254 aa9.29□□□□□ -0.92
GPNMB-201ENST00000258733 LZTS2Q9BRK4 669 aa9.29□□□□□ -0.92
GPNMB-201ENST00000258733 NASPP49321 788 aaPredicted RBP9.29□□□□□ -0.92
GPNMB-201ENST00000258733 CCDC15Q0P6D6 951 aa9.29□□□□□ -0.92
GPNMB-201ENST00000258733 PSMD2Q13200 908 aa9.29□□□□□ -0.92
GPNMB-201ENST00000258733 NAIF1Q69YI7 327 aaPredicted RBP9.29□□□□□ -0.92
GPNMB-201ENST00000258733 GAS2L3Q86XJ1 694 aa9.29□□□□□ -0.92
GPNMB-201ENST00000258733 THOC1Q96FV9 657 aaKnown RBP9.29□□□□□ -0.92
GPNMB-201ENST00000258733 SLKQ9H2G2 1235 aaPredicted RBP9.29□□□□□ -0.92
GPNMB-201ENST00000258733 APBB1O00213 710 aa9.28□□□□□ -0.92
GPNMB-201ENST00000258733 TRIM66O15016 1216 aa9.28□□□□□ -0.92
GPNMB-201ENST00000258733 HSP90AB1P08238 724 aaKnown RBP9.28□□□□□ -0.92
GPNMB-201ENST00000258733 RASA3Q14644 834 aa9.28□□□□□ -0.92
GPNMB-201ENST00000258733 C16orf87Q6PH81 154 aa9.28□□□□□ -0.92
GPNMB-201ENST00000258733 OGFOD1Q8N543 542 aa9.28□□□□□ -0.92
GPNMB-201ENST00000258733 LARP6Q9BRS8 491 aaKnown RBP9.28□□□□□ -0.92
GPNMB-201ENST00000258733 ZFYVE27Q5T4F4 411 aa9.28□□□□□ -0.92
GPNMB-201ENST00000258733 WWC2Q6AWC2 1192 aa9.28□□□□□ -0.92
GPNMB-201ENST00000258733 CACTIN-AS1Q8N1I8 211 aa9.28□□□□□ -0.92
GPNMB-201ENST00000258733 PHC3Q8NDX5 983 aa9.28□□□□□ -0.92
GPNMB-201ENST00000258733 CWC25Q9NXE8 425 aaPredicted RBP9.28□□□□□ -0.92
GPNMB-201ENST00000258733 CPSF2Q9P2I0 782 aaKnown RBP9.28□□□□□ -0.92
GPNMB-201ENST00000258733 BIN2Q9UBW5 565 aaPredicted RBP9.28□□□□□ -0.92
GPNMB-201ENST00000258733 EIF3JO75822 258 aaKnown RBP9.27□□□□□ -0.92
GPNMB-201ENST00000258733 CYP2C19P33261 490 aa9.27□□□□□ -0.92
GPNMB-201ENST00000258733 TRAF1Q13077 416 aa9.27□□□□□ -0.92
GPNMB-201ENST00000258733 KIF2CQ99661 725 aa9.27□□□□□ -0.92
GPNMB-201ENST00000258733 DDX41Q9UJV9 622 aaKnown RBP9.27□□□□□ -0.92
GPNMB-201ENST00000258733 SYNRGQ9UMZ2 1314 aa9.27□□□□□ -0.92
GPNMB-201ENST00000258733 MORC2Q9Y6X9 1032 aaPredicted RBP9.27□□□□□ -0.92
GPNMB-201ENST00000258733 AKNAQ7Z591 1439 aa9.27□□□□□ -0.93
GPNMB-201ENST00000258733 VPS8Q8N3P4 1428 aa9.27□□□□□ -0.93
GPNMB-201ENST00000258733 IPO5O00410 1097 aaKnown RBP9.27□□□□□ -0.93
GPNMB-201ENST00000258733 REC8O95072 547 aa9.27□□□□□ -0.93
GPNMB-201ENST00000258733 TTC31Q49AM3 519 aaPredicted RBP9.27□□□□□ -0.93
GPNMB-201ENST00000258733 MUM1L1Q5H9M0 696 aa9.27□□□□□ -0.93
GPNMB-201ENST00000258733 MYBL2P10244 700 aa9.26□□□□□ -0.93
GPNMB-201ENST00000258733 HNRNPUL2Q1KMD3 747 aaKnown RBP9.26□□□□□ -0.93
GPNMB-201ENST00000258733 WDR78Q5VTH9 848 aa9.26□□□□□ -0.93
GPNMB-201ENST00000258733 MCTP2Q6DN12 878 aa9.26□□□□□ -0.93
GPNMB-201ENST00000258733 NFXL1Q6ZNB6 911 aa9.26□□□□□ -0.93
GPNMB-201ENST00000258733 SUGP1Q8IWZ8 645 aaKnown RBP9.26□□□□□ -0.93
GPNMB-201ENST00000258733 ANTXR1Q9H6X2 564 aa9.26□□□□□ -0.93
GPNMB-201ENST00000258733 FAM177BA6PVY3 158 aa9.26□□□□□ -0.93
GPNMB-201ENST00000258733 FAM200BP0CF97 657 aa9.26□□□□□ -0.93
GPNMB-201ENST00000258733 IFT88Q13099 833 aa9.26□□□□□ -0.93
GPNMB-201ENST00000258733 SLX1AQ9BQ83 275 aa9.26□□□□□ -0.93
GPNMB-201ENST00000258733 ZNF446Q9NWS9 450 aa9.26□□□□□ -0.93
GPNMB-201ENST00000258733 CWC15Q9P013 229 aaKnown RBP9.26□□□□□ -0.93
GPNMB-201ENST00000258733 CHD1O14646 1710 aa9.26□□□□□ -0.93
GPNMB-201ENST00000258733 SPAG9O60271 1321 aaKnown RBP9.26□□□□□ -0.93
GPNMB-201ENST00000258733 ANKRD13AQ8IZ07 590 aa9.26□□□□□ -0.93
GPNMB-201ENST00000258733 FAXDC2Q96IV6 333 aa9.26□□□□□ -0.93
GPNMB-201ENST00000258733 ARHGEF10LQ9HCE6 1279 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms