RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 PLCH2O75038 1416 aa14.94□□□□□ -0.02
USP30-201ENST00000257548 FGD1P98174 961 aa14.93□□□□□ -0.02
USP30-201ENST00000257548 ZBTB40Q9NUA8 1239 aa14.93□□□□□ -0.02
USP30-201ENST00000257548 OTUD7AQ8TE49 926 aaPredicted RBP14.93□□□□□ -0.02
USP30-201ENST00000257548 TERF2IPQ9NYB0 399 aa14.93□□□□□ -0.02
USP30-201ENST00000257548 TMEM63CQ9P1W3 806 aa14.93□□□□□ -0.02
USP30-201ENST00000257548 KDM5DQ9BY66 1539 aa14.93□□□□□ -0.02
USP30-201ENST00000257548 UGGT1Q9NYU2 1555 aa14.93□□□□□ -0.02
USP30-201ENST00000257548 HMMRO75330 724 aa14.93□□□□□ -0.02
USP30-201ENST00000257548 ZRSR1Q15695 479 aaKnown RBP14.93□□□□□ -0.02
USP30-201ENST00000257548 LRSAM1Q6UWE0 723 aa14.93□□□□□ -0.02
USP30-201ENST00000257548 CWC22Q9HCG8 908 aaKnown RBP14.93□□□□□ -0.02
USP30-201ENST00000257548 ATAD2Q6PL18 1390 aa14.92□□□□□ -0.02
USP30-201ENST00000257548 ADCY5O95622 1261 aa14.92□□□□□ -0.02
USP30-201ENST00000257548 ZNF428Q96B54 188 aa14.92□□□□□ -0.02
USP30-201ENST00000257548 DIAPH3Q9NSV4 1193 aa14.92□□□□□ -0.02
USP30-201ENST00000257548 EXOC6BQ9Y2D4 811 aa14.92□□□□□ -0.02
USP30-201ENST00000257548 MAGI2Q86UL8 1455 aa14.92□□□□□ -0.02
USP30-201ENST00000257548 EVC2Q86UK5 1308 aa14.92□□□□□ -0.02
USP30-201ENST00000257548 TNNT3P45378 269 aaPredicted RBP14.92□□□□□ -0.02
USP30-201ENST00000257548 NOLC1Q14978 699 aaKnown RBP eCLIP14.92□□□□□ -0.02
USP30-201ENST00000257548 COL17A1Q9UMD9 1497 aaPredicted RBP14.91□□□□□ -0.02
USP30-201ENST00000257548 API5Q9BZZ5 524 aaKnown RBP14.91□□□□□ -0.02
USP30-201ENST00000257548 PPP1R9BQ96SB3 815 aa14.91□□□□□ -0.02
USP30-201ENST00000257548 LMBRD1Q9NUN5 540 aa14.91□□□□□ -0.02
USP30-201ENST00000257548 C16orf45Q96MC5 204 aaPredicted RBP14.91□□□□□ -0.02
USP30-201ENST00000257548 ABCC2Q92887 1545 aa14.9□□□□□ -0.02
USP30-201ENST00000257548 CAMK4Q16566 473 aa14.9□□□□□ -0.02
USP30-201ENST00000257548 ERC2O15083 957 aa14.9□□□□□ -0.02
USP30-201ENST00000257548 TRIM5Q9C035 493 aa14.9□□□□□ -0.02
USP30-201ENST00000257548 CFAP65Q6ZU64 1925 aaKnown RBP14.9□□□□□ -0.02
USP30-201ENST00000257548 VGLL3A8MV65 326 aa14.9□□□□□ -0.02
USP30-201ENST00000257548 TSPYL6Q8N831 410 aa14.9□□□□□ -0.02
USP30-201ENST00000257548 FOSBP53539 338 aa14.89□□□□□ -0.03
USP30-201ENST00000257548 SMC3Q9UQE7 1217 aa14.89□□□□□ -0.03
USP30-201ENST00000257548 FERMT3Q86UX7 667 aa14.89□□□□□ -0.03
USP30-201ENST00000257548 CCDC94Q9BW85 323 aaPredicted RBP14.89□□□□□ -0.03
USP30-201ENST00000257548 PREX2Q70Z35 1606 aa14.89□□□□□ -0.03
USP30-201ENST00000257548 GIMAP6Q6P9H5 292 aa14.89□□□□□ -0.03
USP30-201ENST00000257548 NSFL1CQ9UNZ2 370 aaKnown RBP14.89□□□□□ -0.03
USP30-201ENST00000257548 SDSP20132 328 aa14.88□□□□□ -0.03
USP30-201ENST00000257548 U2AF2P26368 475 aaKnown RBP eCLIP14.88□□□□□ -0.03
USP30-201ENST00000257548 TMX3Q96JJ7 454 aa14.88□□□□□ -0.03
USP30-201ENST00000257548 TPD52L1Q16890 204 aaPredicted RBP14.88□□□□□ -0.03
USP30-201ENST00000257548 GPT2Q8TD30 523 aa14.88□□□□□ -0.03
USP30-201ENST00000257548 MLECQ14165 292 aa14.87□□□□□ -0.03
USP30-201ENST00000257548 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.87□□□□□ -0.03
USP30-201ENST00000257548 V9GYY5 206 aaPredicted RBP14.87□□□□□ -0.03
USP30-201ENST00000257548 GNAI1P63096 354 aa14.87□□□□□ -0.03
USP30-201ENST00000257548 PLCD3Q8N3E9 789 aa14.87□□□□□ -0.03
USP30-201ENST00000257548 IL1RAPL2Q9NP60 686 aa14.87□□□□□ -0.03
USP30-201ENST00000257548 MIS18AQ9NYP9 233 aa14.87□□□□□ -0.03
USP30-201ENST00000257548 ASXL1Q8IXJ9 1541 aa14.87□□□□□ -0.03
USP30-201ENST00000257548 ARHGEF5Q12774 1597 aa14.87□□□□□ -0.03
USP30-201ENST00000257548 C14orf37Q86TY3 774 aa14.87□□□□□ -0.03
USP30-201ENST00000257548 FAM83GA6ND36 823 aa14.86□□□□□ -0.03
USP30-201ENST00000257548 ZBTB9Q96C00 473 aa14.86□□□□□ -0.03
USP30-201ENST00000257548 FANCAO15360 1455 aa14.86□□□□□ -0.03
USP30-201ENST00000257548 ZNF692Q9BU19 519 aaPredicted RBP14.86□□□□□ -0.03
USP30-201ENST00000257548 SMAP1Q8IYB5 467 aaPredicted RBP14.86□□□□□ -0.03
USP30-201ENST00000257548 RTF1Q92541 710 aaKnown RBP14.86□□□□□ -0.03
USP30-201ENST00000257548 ZNF445P59923 1031 aa14.85□□□□□ -0.03
USP30-201ENST00000257548 CYB5RLQ6IPT4 315 aa14.85□□□□□ -0.03
USP30-201ENST00000257548 BICD2Q8TD16 824 aa14.85□□□□□ -0.03
USP30-201ENST00000257548 CEBPZQ03701 1054 aaKnown RBP14.85□□□□□ -0.03
USP30-201ENST00000257548 F6X3S4 739 aa14.84□□□□□ -0.03
USP30-201ENST00000257548 CT47B1P0C2W7 299 aaPredicted RBP14.84□□□□□ -0.03
USP30-201ENST00000257548 GADD45BO75293 160 aaPredicted RBP14.84□□□□□ -0.03
USP30-201ENST00000257548 CKAP2LQ8IYA6 745 aa14.84□□□□□ -0.03
USP30-201ENST00000257548 STK31Q9BXU1 1019 aa14.84□□□□□ -0.03
USP30-201ENST00000257548 PIK3C2GO75747 1445 aa14.83□□□□□ -0.03
USP30-201ENST00000257548 GOLGA6L19H0YKK7 550 aa14.83□□□□□ -0.03
USP30-201ENST00000257548 SLC4A2P04920 1241 aa14.83□□□□□ -0.03
USP30-201ENST00000257548 FKBP5Q13451 457 aaPredicted RBP14.83□□□□□ -0.03
USP30-201ENST00000257548 KRT24Q2M2I5 525 aa14.83□□□□□ -0.03
USP30-201ENST00000257548 GORABQ5T7V8 394 aa14.83□□□□□ -0.03
USP30-201ENST00000257548 USP48Q86UV5 1035 aa14.83□□□□□ -0.03
USP30-201ENST00000257548 BECN2A8MW95 431 aa14.83□□□□□ -0.04
USP30-201ENST00000257548 CCDC9Q9Y3X0 531 aaKnown RBP14.83□□□□□ -0.04
USP30-201ENST00000257548 ADGRL1O94910 1474 aa14.83□□□□□ -0.04
USP30-201ENST00000257548 MCM5P33992 734 aa14.82□□□□□ -0.04
USP30-201ENST00000257548 TTC22Q5TAA0 569 aa14.82□□□□□ -0.04
USP30-201ENST00000257548 FILIP1Q7Z7B0 1213 aa14.82□□□□□ -0.04
USP30-201ENST00000257548 PLEKHM2Q8IWE5 1019 aa14.82□□□□□ -0.04
USP30-201ENST00000257548 CNPY2Q9Y2B0 182 aa14.82□□□□□ -0.04
USP30-201ENST00000257548 ATP6V1DQ9Y5K8 247 aa14.82□□□□□ -0.04
USP30-201ENST00000257548 CCDC112Q8NEF3 446 aa14.82□□□□□ -0.04
USP30-201ENST00000257548 DUOX2Q9NRD8 1548 aa14.82□□□□□ -0.04
USP30-201ENST00000257548 INSRP06213 1382 aa14.82□□□□□ -0.04
USP30-201ENST00000257548 ZNF500O60304 480 aaPredicted RBP14.82□□□□□ -0.04
USP30-201ENST00000257548 HS1BP3Q53T59 392 aa14.82□□□□□ -0.04
USP30-201ENST00000257548 CCAR2Q8N163 923 aaKnown RBP14.82□□□□□ -0.04
USP30-201ENST00000257548 USP26Q9BXU7 913 aa14.82□□□□□ -0.04
USP30-201ENST00000257548 ATP10AO60312 1499 aa14.81□□□□□ -0.04
USP30-201ENST00000257548 WDR33Q9C0J8 1336 aaKnown RBP14.81□□□□□ -0.04
USP30-201ENST00000257548 CABP1Q9NZU7 370 aa14.81□□□□□ -0.04
USP30-201ENST00000257548 ZBTB7BO15156 539 aaPredicted RBP14.81□□□□□ -0.04
USP30-201ENST00000257548 CHMP4AQ9BY43 222 aa14.81□□□□□ -0.04
USP30-201ENST00000257548 GSPT1P15170 499 aaKnown RBP14.8□□□□□ -0.04
USP30-201ENST00000257548 FMNL2Q96PY5 1086 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms