RNA–Protein interactions for RNA: ENST00000257189.4

DSG3-201, Transcript of desmoglein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DSG3, Length 5,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSG3-201ENST00000257189 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.72□□□□□ -0.85
DSG3-201ENST00000257189 UBXN4Q92575 508 aa9.72□□□□□ -0.85
DSG3-201ENST00000257189 TRAK1Q9UPV9 953 aa9.72□□□□□ -0.85
DSG3-201ENST00000257189 CLEC11AQ9Y240 323 aa9.72□□□□□ -0.85
DSG3-201ENST00000257189 PPFIBP1Q86W92 1011 aa9.71□□□□□ -0.85
DSG3-201ENST00000257189 GBP2P32456 591 aaPredicted RBP9.71□□□□□ -0.85
DSG3-201ENST00000257189 ENOX2Q16206 610 aaKnown RBP9.71□□□□□ -0.85
DSG3-201ENST00000257189 MINK1Q8N4C8 1332 aaPredicted RBP9.71□□□□□ -0.85
DSG3-201ENST00000257189 POLA1P09884 1462 aaPredicted RBP9.71□□□□□ -0.85
DSG3-201ENST00000257189 IFIT2P09913 472 aaKnown RBP9.71□□□□□ -0.86
DSG3-201ENST00000257189 TEFQ10587 303 aa9.71□□□□□ -0.86
DSG3-201ENST00000257189 FOXD4L6Q3SYB3 417 aaPredicted RBP9.7□□□□□ -0.86
DSG3-201ENST00000257189 FOXD4L3Q6VB84 417 aaPredicted RBP9.7□□□□□ -0.86
DSG3-201ENST00000257189 KIAA0586Q9BVV6 1533 aa9.7□□□□□ -0.86
DSG3-201ENST00000257189 NLRP6P59044 892 aa9.7□□□□□ -0.86
DSG3-201ENST00000257189 LUZP1Q86V48 1076 aa9.7□□□□□ -0.86
DSG3-201ENST00000257189 HIP1O00291 1037 aa9.7□□□□□ -0.86
DSG3-201ENST00000257189 DHX16O60231 1041 aaKnown RBP9.7□□□□□ -0.86
DSG3-201ENST00000257189 CRACR2AQ9BSW2 395 aa9.7□□□□□ -0.86
DSG3-201ENST00000257189 C11orf95C9JLR9 678 aaPredicted RBP9.7□□□□□ -0.86
DSG3-201ENST00000257189 RAB3GAP2Q9H2M9 1393 aa9.7□□□□□ -0.86
DSG3-201ENST00000257189 EVC2Q86UK5 1308 aa9.7□□□□□ -0.86
DSG3-201ENST00000257189 NCKAP5LQ9HCH0 1330 aa9.7□□□□□ -0.86
DSG3-201ENST00000257189 CCDC43Q96MW1 224 aaKnown RBP9.69□□□□□ -0.86
DSG3-201ENST00000257189 TATP17735 454 aaPredicted RBP9.69□□□□□ -0.86
DSG3-201ENST00000257189 RNF214Q8ND24 703 aa9.69□□□□□ -0.86
DSG3-201ENST00000257189 PPM1EQ8WY54 764 aa9.69□□□□□ -0.86
DSG3-201ENST00000257189 WDR33Q9C0J8 1336 aaKnown RBP9.69□□□□□ -0.86
DSG3-201ENST00000257189 SYCP1Q15431 976 aa9.69□□□□□ -0.86
DSG3-201ENST00000257189 CCDC148Q8NFR7 591 aa9.69□□□□□ -0.86
DSG3-201ENST00000257189 CCDC102AQ96A19 550 aa9.69□□□□□ -0.86
DSG3-201ENST00000257189 CENPHQ9H3R5 247 aa9.69□□□□□ -0.86
DSG3-201ENST00000257189 PRKRIP1Q9H875 184 aaPredicted RBP9.69□□□□□ -0.86
DSG3-201ENST00000257189 TIGD1Q96MW7 591 aa9.69□□□□□ -0.86
DSG3-201ENST00000257189 RBM42Q9BTD8 480 aaKnown RBP9.69□□□□□ -0.86
DSG3-201ENST00000257189 STIM1Q13586 685 aa9.68□□□□□ -0.86
DSG3-201ENST00000257189 KIAA1328Q86T90 577 aa9.68□□□□□ -0.86
DSG3-201ENST00000257189 MPHOSPH9Q99550 1183 aa9.68□□□□□ -0.86
DSG3-201ENST00000257189 GRIN2AQ12879 1464 aa9.68□□□□□ -0.86
DSG3-201ENST00000257189 TNRQ92752 1358 aa9.68□□□□□ -0.86
DSG3-201ENST00000257189 NEMFO60524 1076 aa9.68□□□□□ -0.86
DSG3-201ENST00000257189 NFXL1Q6ZNB6 911 aa9.68□□□□□ -0.86
DSG3-201ENST00000257189 ZNF526Q8TF50 670 aaPredicted RBP9.68□□□□□ -0.86
DSG3-201ENST00000257189 COG6Q9Y2V7 657 aa9.68□□□□□ -0.86
DSG3-201ENST00000257189 STAMBPO95630 424 aa9.68□□□□□ -0.86
DSG3-201ENST00000257189 RALYLQ86SE5 291 aaKnown RBP9.68□□□□□ -0.86
DSG3-201ENST00000257189 SMTNL1A8MU46 457 aa9.67□□□□□ -0.86
DSG3-201ENST00000257189 ZSCAN12O43309 604 aa9.67□□□□□ -0.86
DSG3-201ENST00000257189 SETSIPP0DME0 302 aa9.67□□□□□ -0.86
DSG3-201ENST00000257189 GIGYF2Q6Y7W6 1299 aaKnown RBP9.67□□□□□ -0.86
DSG3-201ENST00000257189 BICRAQ9NZM4 1560 aa9.67□□□□□ -0.86
DSG3-201ENST00000257189 ADGRL1O94910 1474 aa9.67□□□□□ -0.86
DSG3-201ENST00000257189 SMG6Q86US8 1419 aaKnown RBP9.67□□□□□ -0.86
DSG3-201ENST00000257189 ANKRD1Q15327 319 aa9.67□□□□□ -0.86
DSG3-201ENST00000257189 FEZ1Q99689 392 aa9.67□□□□□ -0.86
DSG3-201ENST00000257189 ASXL2Q76L83 1435 aa9.67□□□□□ -0.86
DSG3-201ENST00000257189 SSR1P43307 286 aaKnown RBP9.67□□□□□ -0.86
DSG3-201ENST00000257189 SMC1AQ14683 1233 aaKnown RBP9.67□□□□□ -0.86
DSG3-201ENST00000257189 DYNC1I1O14576 645 aa9.66□□□□□ -0.86
DSG3-201ENST00000257189 SERPINC1P01008 464 aa9.66□□□□□ -0.86
DSG3-201ENST00000257189 ZFYVE27Q5T4F4 411 aa9.66□□□□□ -0.86
DSG3-201ENST00000257189 MAP2K1Q02750 393 aaPredicted RBP9.66□□□□□ -0.86
DSG3-201ENST00000257189 TTLL12Q14166 644 aaPredicted RBP9.66□□□□□ -0.86
DSG3-201ENST00000257189 IVLP07476 585 aa9.66□□□□□ -0.86
DSG3-201ENST00000257189 CEP57L1Q8IYX8 460 aa9.66□□□□□ -0.86
DSG3-201ENST00000257189 DDX54Q8TDD1 881 aaKnown RBP9.66□□□□□ -0.86
DSG3-201ENST00000257189 ERICH4A6NGS2 130 aa9.66□□□□□ -0.86
DSG3-201ENST00000257189 PRPF40AO75400 957 aaKnown RBP9.66□□□□□ -0.86
DSG3-201ENST00000257189 DDX58O95786 925 aaKnown RBP9.66□□□□□ -0.86
DSG3-201ENST00000257189 IRX3P78415 501 aaPredicted RBP9.66□□□□□ -0.86
DSG3-201ENST00000257189 JAKMIP3Q5VZ66 844 aa9.66□□□□□ -0.86
DSG3-201ENST00000257189 CFAP57Q96MR6 1250 aa9.66□□□□□ -0.86
DSG3-201ENST00000257189 CNTLNQ9NXG0 1405 aa9.66□□□□□ -0.86
DSG3-201ENST00000257189 EXOC5O00471 708 aa9.66□□□□□ -0.86
DSG3-201ENST00000257189 KIF18AQ8NI77 898 aa9.66□□□□□ -0.86
DSG3-201ENST00000257189 G3BP1Q13283 466 aaKnown RBP eCLIP9.65□□□□□ -0.86
DSG3-201ENST00000257189 CCDC83Q8IWF9 413 aa9.65□□□□□ -0.86
DSG3-201ENST00000257189 NUTM2GQ5VZR2 741 aa9.65□□□□□ -0.86
DSG3-201ENST00000257189 TNMDQ9H2S6 317 aa9.65□□□□□ -0.86
DSG3-201ENST00000257189 GTF2A1P52655 376 aaPredicted RBP9.65□□□□□ -0.86
DSG3-201ENST00000257189 PRIMPOLQ96LW4 560 aa9.65□□□□□ -0.86
DSG3-201ENST00000257189 IMMTQ16891 758 aaKnown RBP9.65□□□□□ -0.87
DSG3-201ENST00000257189 CNTROBQ8N137 903 aa9.65□□□□□ -0.87
DSG3-201ENST00000257189 KRT85P78386 507 aa9.64□□□□□ -0.87
DSG3-201ENST00000257189 SART3Q15020 963 aaKnown RBP9.64□□□□□ -0.87
DSG3-201ENST00000257189 NPHP3Q7Z494 1330 aa9.64□□□□□ -0.87
DSG3-201ENST00000257189 NBPF1Q3BBV0 1214 aa9.64□□□□□ -0.87
DSG3-201ENST00000257189 TAF4BQ92750 862 aa9.64□□□□□ -0.87
DSG3-201ENST00000257189 IGF1RP08069 1367 aa9.64□□□□□ -0.87
DSG3-201ENST00000257189 ANKRD62A6NC57 917 aa9.64□□□□□ -0.87
DSG3-201ENST00000257189 GCOM1H8Y6P7 765 aaPredicted RBP9.64□□□□□ -0.87
DSG3-201ENST00000257189 MYZAPP0CAP1 466 aa9.64□□□□□ -0.87
DSG3-201ENST00000257189 SPECC1LQ69YQ0 1117 aa9.64□□□□□ -0.87
DSG3-201ENST00000257189 TAX1BP1Q86VP1 789 aa9.64□□□□□ -0.87
DSG3-201ENST00000257189 VPS37DQ86XT2 251 aa9.64□□□□□ -0.87
DSG3-201ENST00000257189 GTPBP4Q9BZE4 634 aaKnown RBP9.64□□□□□ -0.87
DSG3-201ENST00000257189 USP21Q9UK80 565 aa9.64□□□□□ -0.87
DSG3-201ENST00000257189 BMS1Q14692 1282 aaKnown RBP9.63□□□□□ -0.87
DSG3-201ENST00000257189 STK38Q15208 465 aa9.63□□□□□ -0.87
DSG3-201ENST00000257189 DNAAF4Q8WXU2 420 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms