RNA–Protein interactions for RNA: ENST00000255448.8

DCLK1-201, Transcript of doublecortin like kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DCLK1, Length 5,703 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK1-201ENST00000255448 RRAGDQ9NQL2 400 aaPredicted RBP13.01□□□□□ -0.33
DCLK1-201ENST00000255448 FAM193AP78312 1265 aa13□□□□□ -0.33
DCLK1-201ENST00000255448 DYDC1Q8WWB3 177 aa13□□□□□ -0.33
DCLK1-201ENST00000255448 CCDC94Q9BW85 323 aaPredicted RBP13□□□□□ -0.33
DCLK1-201ENST00000255448 ABCA10Q8WWZ4 1543 aa13□□□□□ -0.33
DCLK1-201ENST00000255448 ESCO1Q5FWF5 840 aa13□□□□□ -0.33
DCLK1-201ENST00000255448 ABTB2Q8N961 1025 aa13□□□□□ -0.33
DCLK1-201ENST00000255448 ZNF692Q9BU19 519 aaPredicted RBP13□□□□□ -0.33
DCLK1-201ENST00000255448 MCM2P49736 904 aa13□□□□□ -0.33
DCLK1-201ENST00000255448 MTHFSP49914 203 aa13□□□□□ -0.33
DCLK1-201ENST00000255448 PTPN14Q15678 1187 aa13□□□□□ -0.33
DCLK1-201ENST00000255448 ZFP91Q96JP5 570 aaPredicted RBP13□□□□□ -0.33
DCLK1-201ENST00000255448 TRIM34Q9BYJ4 488 aa13□□□□□ -0.33
DCLK1-201ENST00000255448 TNMDQ9H2S6 317 aa13□□□□□ -0.33
DCLK1-201ENST00000255448 PRAM1Q96QH2 718 aa13□□□□□ -0.33
DCLK1-201ENST00000255448 ERC2O15083 957 aa13□□□□□ -0.33
DCLK1-201ENST00000255448 BCAR3O75815 825 aa13□□□□□ -0.33
DCLK1-201ENST00000255448 PRIMPOLQ96LW4 560 aa13□□□□□ -0.33
DCLK1-201ENST00000255448 PLEKHO1Q53GL0 409 aaPredicted RBP12.99□□□□□ -0.33
DCLK1-201ENST00000255448 TBC1D2Q9BYX2 928 aa12.99□□□□□ -0.33
DCLK1-201ENST00000255448 RIC3Q7Z5B4 369 aa12.99□□□□□ -0.33
DCLK1-201ENST00000255448 CPLX1O14810 134 aa12.99□□□□□ -0.33
DCLK1-201ENST00000255448 RAPGEF3O95398 923 aa12.99□□□□□ -0.33
DCLK1-201ENST00000255448 VPS53Q5VIR6 699 aa12.99□□□□□ -0.33
DCLK1-201ENST00000255448 ANKRD30BQ9BXX2 1392 aa12.99□□□□□ -0.33
DCLK1-201ENST00000255448 TRDNQ13061 729 aa12.98□□□□□ -0.33
DCLK1-201ENST00000255448 PDE3AQ14432 1141 aa12.98□□□□□ -0.33
DCLK1-201ENST00000255448 TNPO1Q92973 898 aaKnown RBP12.98□□□□□ -0.33
DCLK1-201ENST00000255448 C16orf45Q96MC5 204 aaPredicted RBP12.98□□□□□ -0.33
DCLK1-201ENST00000255448 WWC1Q8IX03 1113 aa12.98□□□□□ -0.33
DCLK1-201ENST00000255448 TIAM1Q13009 1591 aa12.98□□□□□ -0.33
DCLK1-201ENST00000255448 TICAM2Q86XR7 235 aa12.97□□□□□ -0.33
DCLK1-201ENST00000255448 NUTM2GQ5VZR2 741 aa12.97□□□□□ -0.33
DCLK1-201ENST00000255448 WDR33Q9C0J8 1336 aaKnown RBP12.97□□□□□ -0.33
DCLK1-201ENST00000255448 TRIM29Q14134 588 aa12.97□□□□□ -0.33
DCLK1-201ENST00000255448 USP25Q9UHP3 1055 aa12.97□□□□□ -0.33
DCLK1-201ENST00000255448 KIF18AQ8NI77 898 aa12.97□□□□□ -0.33
DCLK1-201ENST00000255448 DAPK1P53355 1430 aa12.97□□□□□ -0.33
DCLK1-201ENST00000255448 GOLGA6L7A0A1B0GV03 622 aa12.97□□□□□ -0.33
DCLK1-201ENST00000255448 LRRCC1Q9C099 1032 aa12.97□□□□□ -0.33
DCLK1-201ENST00000255448 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.96□□□□□ -0.33
DCLK1-201ENST00000255448 MNAT1P51948 309 aa12.96□□□□□ -0.33
DCLK1-201ENST00000255448 KRT222Q8N1A0 295 aa12.96□□□□□ -0.33
DCLK1-201ENST00000255448 ZNF526Q8TF50 670 aaPredicted RBP12.96□□□□□ -0.33
DCLK1-201ENST00000255448 SUPT6HQ7KZ85 1726 aaKnown RBP12.96□□□□□ -0.33
DCLK1-201ENST00000255448 UBTFL1P0CB47 393 aaPredicted RBP12.96□□□□□ -0.33
DCLK1-201ENST00000255448 CCDC30Q5VVM6 783 aa12.96□□□□□ -0.33
DCLK1-201ENST00000255448 PNISRQ8TF01 805 aaKnown RBP12.96□□□□□ -0.34
DCLK1-201ENST00000255448 SERPINC1P01008 464 aa12.95□□□□□ -0.34
DCLK1-201ENST00000255448 GNAI3P08754 354 aa12.95□□□□□ -0.34
DCLK1-201ENST00000255448 CEBPZQ03701 1054 aaKnown RBP12.95□□□□□ -0.34
DCLK1-201ENST00000255448 PPP2R1AP30153 589 aa12.95□□□□□ -0.34
DCLK1-201ENST00000255448 TCP11L2Q8N4U5 519 aa12.95□□□□□ -0.34
DCLK1-201ENST00000255448 RBM33Q96EV2 1170 aaKnown RBP12.95□□□□□ -0.34
DCLK1-201ENST00000255448 MAGI1Q96QZ7 1491 aaPredicted RBP12.95□□□□□ -0.34
DCLK1-201ENST00000255448 OFD1O75665 1012 aa12.95□□□□□ -0.34
DCLK1-201ENST00000255448 SSFA2P28290 1259 aa12.95□□□□□ -0.34
DCLK1-201ENST00000255448 LMAN1P49257 510 aa12.95□□□□□ -0.34
DCLK1-201ENST00000255448 SHTN1A0MZ66 631 aa12.94□□□□□ -0.34
DCLK1-201ENST00000255448 GOLGA6L10A6NI86 522 aa12.94□□□□□ -0.34
DCLK1-201ENST00000255448 DHX8Q14562 1220 aaKnown RBP12.94□□□□□ -0.34
DCLK1-201ENST00000255448 CTDP1Q9Y5B0 961 aaPredicted RBP12.94□□□□□ -0.34
DCLK1-201ENST00000255448 IQGAP2Q13576 1575 aa12.94□□□□□ -0.34
DCLK1-201ENST00000255448 ATAD2Q6PL18 1390 aa12.94□□□□□ -0.34
DCLK1-201ENST00000255448 TATP17735 454 aaPredicted RBP12.94□□□□□ -0.34
DCLK1-201ENST00000255448 BMS1Q14692 1282 aaKnown RBP12.94□□□□□ -0.34
DCLK1-201ENST00000255448 DNAAF4Q8WXU2 420 aa12.94□□□□□ -0.34
DCLK1-201ENST00000255448 KIF2AO00139 706 aaPredicted RBP12.93□□□□□ -0.34
DCLK1-201ENST00000255448 PRKAR2BP31323 418 aa12.93□□□□□ -0.34
DCLK1-201ENST00000255448 EPRSP07814 1512 aaKnown RBP12.93□□□□□ -0.34
DCLK1-201ENST00000255448 BRPF1P55201 1214 aaPredicted RBP12.93□□□□□ -0.34
DCLK1-201ENST00000255448 CDK19Q9BWU1 502 aa12.93□□□□□ -0.34
DCLK1-201ENST00000255448 PDCP20941 246 aa12.93□□□□□ -0.34
DCLK1-201ENST00000255448 RTEL1-TNFRSF6BF6WH68 1400 aa12.93□□□□□ -0.34
DCLK1-201ENST00000255448 CT47A1Q5JQC4 288 aaPredicted RBP12.93□□□□□ -0.34
DCLK1-201ENST00000255448 NUP62CLQ9H1M0 184 aa12.93□□□□□ -0.34
DCLK1-201ENST00000255448 ERBINQ96RT1 1412 aa12.93□□□□□ -0.34
DCLK1-201ENST00000255448 ERICH2A1L162 156 aa12.93□□□□□ -0.34
DCLK1-201ENST00000255448 CD109Q6YHK3 1445 aa12.92□□□□□ -0.34
DCLK1-201ENST00000255448 AIMP1Q12904 312 aaKnown RBP12.92□□□□□ -0.34
DCLK1-201ENST00000255448 SMARCE1Q969G3 411 aa12.92□□□□□ -0.34
DCLK1-201ENST00000255448 URI1O94763 535 aaPredicted RBP12.92□□□□□ -0.34
DCLK1-201ENST00000255448 DDX11Q96FC9 970 aa12.92□□□□□ -0.34
DCLK1-201ENST00000255448 KIF20AO95235 890 aa12.92□□□□□ -0.34
DCLK1-201ENST00000255448 CCDC141Q6ZP82 1450 aa12.92□□□□□ -0.34
DCLK1-201ENST00000255448 KRT85P78386 507 aa12.91□□□□□ -0.34
DCLK1-201ENST00000255448 CCDC47Q96A33 483 aaKnown RBP12.91□□□□□ -0.34
DCLK1-201ENST00000255448 INCENPQ9NQS7 918 aa12.91□□□□□ -0.34
DCLK1-201ENST00000255448 TRMT1Q9NXH9 659 aaKnown RBP12.91□□□□□ -0.34
DCLK1-201ENST00000255448 TXLNBQ8N3L3 684 aa12.91□□□□□ -0.34
DCLK1-201ENST00000255448 ZNF830Q96NB3 372 aaPredicted RBP12.91□□□□□ -0.34
DCLK1-201ENST00000255448 FAM107BQ9H098 131 aa12.91□□□□□ -0.34
DCLK1-201ENST00000255448 TCEAL9Q9UHQ7 104 aa12.91□□□□□ -0.34
DCLK1-201ENST00000255448 NINLQ9Y2I6 1382 aa12.91□□□□□ -0.34
DCLK1-201ENST00000255448 ADCY5O95622 1261 aa12.91□□□□□ -0.34
DCLK1-201ENST00000255448 NOLC1Q14978 699 aaKnown RBP eCLIP12.9□□□□□ -0.34
DCLK1-201ENST00000255448 CUL7Q14999 1698 aa12.9□□□□□ -0.34
DCLK1-201ENST00000255448 CRACR2AQ9BSW2 395 aa12.9□□□□□ -0.34
DCLK1-201ENST00000255448 C1orf115Q9H7X2 142 aa12.9□□□□□ -0.34
DCLK1-201ENST00000255448 ODF2Q5BJF6 829 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms