RNA–Protein interactions for RNA: ENST00000252542.8

SAFB2-201, Transcript of scaffold attachment factor B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAFB2, Length 3,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-201ENST00000252542 A2ML1A8K2U0 1454 aa18.9■□□□□ 0.62
SAFB2-201ENST00000252542 SLC4A2P04920 1241 aa18.9■□□□□ 0.62
SAFB2-201ENST00000252542 GZF1Q9H116 711 aaPredicted RBP18.9■□□□□ 0.62
SAFB2-201ENST00000252542 PUS7Q96PZ0 661 aaKnown RBP18.89■□□□□ 0.61
SAFB2-201ENST00000252542 ARHGAP31Q2M1Z3 1444 aa18.89■□□□□ 0.61
SAFB2-201ENST00000252542 VAMP4O75379 141 aa18.89■□□□□ 0.61
SAFB2-201ENST00000252542 CALD1Q05682 793 aaKnown RBP18.89■□□□□ 0.61
SAFB2-201ENST00000252542 PTPRMP28827 1452 aa18.88■□□□□ 0.61
SAFB2-201ENST00000252542 THEMISQ8N1K5 641 aaPredicted RBP18.88■□□□□ 0.61
SAFB2-201ENST00000252542 PSME1Q06323 249 aa18.88■□□□□ 0.61
SAFB2-201ENST00000252542 RIMBP3CA6NJZ7 1639 aa18.88■□□□□ 0.61
SAFB2-201ENST00000252542 RIMBP3BA6NNM3 1639 aa18.88■□□□□ 0.61
SAFB2-201ENST00000252542 RIMBP3Q9UFD9 1639 aa18.88■□□□□ 0.61
SAFB2-201ENST00000252542 ALKQ9UM73 1620 aa18.87■□□□□ 0.61
SAFB2-201ENST00000252542 LMOD3Q0VAK6 560 aa18.86■□□□□ 0.61
SAFB2-201ENST00000252542 PHF23Q9BUL5 403 aaPredicted RBP18.86■□□□□ 0.61
SAFB2-201ENST00000252542 SMARCA5O60264 1052 aaPredicted RBP18.86■□□□□ 0.61
SAFB2-201ENST00000252542 PPP6R1Q9UPN7 881 aa18.86■□□□□ 0.61
SAFB2-201ENST00000252542 PPLO60437 1756 aa18.85■□□□□ 0.61
SAFB2-201ENST00000252542 MYO5BQ9ULV0 1848 aa18.85■□□□□ 0.61
SAFB2-201ENST00000252542 TMEM2Q9UHN6 1383 aa18.85■□□□□ 0.61
SAFB2-201ENST00000252542 MAP3K19Q56UN5 1328 aa18.85■□□□□ 0.61
SAFB2-201ENST00000252542 TPRNQ4KMQ1 711 aa18.84■□□□□ 0.61
SAFB2-201ENST00000252542 NINLQ9Y2I6 1382 aa18.84■□□□□ 0.61
SAFB2-201ENST00000252542 SETBP1Q9Y6X0 1596 aa18.83■□□□□ 0.6
SAFB2-201ENST00000252542 FKBP5Q13451 457 aaPredicted RBP18.83■□□□□ 0.6
SAFB2-201ENST00000252542 C16orf71Q8IYS4 520 aaPredicted RBP18.83■□□□□ 0.6
SAFB2-201ENST00000252542 CFAP44Q96MT7 982 aa18.82■□□□□ 0.6
SAFB2-201ENST00000252542 C22orf23Q9BZE7 217 aa18.82■□□□□ 0.6
SAFB2-201ENST00000252542 MTHFSDQ2M296 383 aaKnown RBP18.82■□□□□ 0.6
SAFB2-201ENST00000252542 ANXA1P04083 346 aa18.81■□□□□ 0.6
SAFB2-201ENST00000252542 MRPL50Q8N5N7 158 aaKnown RBP18.81■□□□□ 0.6
SAFB2-201ENST00000252542 TSHZ3Q63HK5 1081 aa18.81■□□□□ 0.6
SAFB2-201ENST00000252542 ZBTB40Q9NUA8 1239 aa18.81■□□□□ 0.6
SAFB2-201ENST00000252542 CLTCQ00610 1675 aaKnown RBP18.81■□□□□ 0.6
SAFB2-201ENST00000252542 CHD1LQ86WJ1 897 aa18.8■□□□□ 0.6
SAFB2-201ENST00000252542 IFT57Q9NWB7 429 aa18.8■□□□□ 0.6
SAFB2-201ENST00000252542 EYA1Q99502 592 aa18.8■□□□□ 0.6
SAFB2-201ENST00000252542 STK31Q9BXU1 1019 aa18.8■□□□□ 0.6
SAFB2-201ENST00000252542 KIAA1210Q9ULL0 1709 aa18.79■□□□□ 0.6
SAFB2-201ENST00000252542 G2E3Q7L622 706 aa18.79■□□□□ 0.6
SAFB2-201ENST00000252542 CD163L1Q9NR16 1453 aa18.79■□□□□ 0.6
SAFB2-201ENST00000252542 NOL8Q76FK4 1167 aaKnown RBP18.78■□□□□ 0.6
SAFB2-201ENST00000252542 ARHGEF40Q8TER5 1519 aa18.78■□□□□ 0.6
SAFB2-201ENST00000252542 LRRC59Q96AG4 307 aaKnown RBP18.78■□□□□ 0.6
SAFB2-201ENST00000252542 ZFYVE9O95405 1425 aa18.78■□□□□ 0.6
SAFB2-201ENST00000252542 ZC3H6P61129 1189 aaKnown RBP18.78■□□□□ 0.6
SAFB2-201ENST00000252542 MEIS3Q99687 375 aa18.77■□□□□ 0.6
SAFB2-201ENST00000252542 API5Q9BZZ5 524 aaKnown RBP18.77■□□□□ 0.6
SAFB2-201ENST00000252542 HSP90AB1P08238 724 aaKnown RBP18.77■□□□□ 0.6
SAFB2-201ENST00000252542 RICTORQ6R327 1708 aa18.77■□□□□ 0.59
SAFB2-201ENST00000252542 DDX17Q92841 729 aaKnown RBP18.76■□□□□ 0.59
SAFB2-201ENST00000252542 PREX1Q8TCU6 1659 aa18.76■□□□□ 0.59
SAFB2-201ENST00000252542 CT47B1P0C2W7 299 aaPredicted RBP18.76■□□□□ 0.59
SAFB2-201ENST00000252542 OTUD7AQ8TE49 926 aaPredicted RBP18.76■□□□□ 0.59
SAFB2-201ENST00000252542 EDC4Q6P2E9 1401 aaKnown RBP18.76■□□□□ 0.59
SAFB2-201ENST00000252542 TMEM131LA2VDJ0 1609 aa18.76■□□□□ 0.59
SAFB2-201ENST00000252542 EXOC6BQ9Y2D4 811 aa18.75■□□□□ 0.59
SAFB2-201ENST00000252542 ZBTB7BO15156 539 aaPredicted RBP18.75■□□□□ 0.59
SAFB2-201ENST00000252542 ALDH1L2Q3SY69 923 aa18.75■□□□□ 0.59
SAFB2-201ENST00000252542 HSCBQ8IWL3 235 aa18.75■□□□□ 0.59
SAFB2-201ENST00000252542 ARHGEF28Q8N1W1 1705 aaKnown RBP18.74■□□□□ 0.59
SAFB2-201ENST00000252542 ORAI2Q96SN7 254 aa18.74■□□□□ 0.59
SAFB2-201ENST00000252542 TBC1D2Q9BYX2 928 aa18.74■□□□□ 0.59
SAFB2-201ENST00000252542 DIP2BQ9P265 1576 aa18.74■□□□□ 0.59
SAFB2-201ENST00000252542 ZC3H13Q5T200 1668 aaKnown RBP18.74■□□□□ 0.59
SAFB2-201ENST00000252542 RBM42Q9BTD8 480 aaKnown RBP18.73■□□□□ 0.59
SAFB2-201ENST00000252542 IL16Q14005 1332 aa18.73■□□□□ 0.59
SAFB2-201ENST00000252542 A0A0G2JS52 829 aa18.73■□□□□ 0.59
SAFB2-201ENST00000252542 ANKLE2Q86XL3 938 aa18.73■□□□□ 0.59
SAFB2-201ENST00000252542 CPS1P31327 1500 aa18.73■□□□□ 0.59
SAFB2-201ENST00000252542 FOXD4L5Q5VV16 416 aaPredicted RBP18.73■□□□□ 0.59
SAFB2-201ENST00000252542 MPRIPQ6WCQ1 1025 aa18.73■□□□□ 0.59
SAFB2-201ENST00000252542 FOXD4L4Q8WXT5 416 aaPredicted RBP18.73■□□□□ 0.59
SAFB2-201ENST00000252542 CSB-PGBD3P0DP91 1061 aa18.72■□□□□ 0.59
SAFB2-201ENST00000252542 PHF8Q9UPP1 1060 aa18.72■□□□□ 0.59
SAFB2-201ENST00000252542 IFT172Q9UG01 1749 aa18.71■□□□□ 0.59
SAFB2-201ENST00000252542 TRIM6-TRIM34B2RNG4 842 aa18.71■□□□□ 0.59
SAFB2-201ENST00000252542 AIMP1Q12904 312 aaKnown RBP18.71■□□□□ 0.59
SAFB2-201ENST00000252542 RILPL2Q969X0 211 aa18.7■□□□□ 0.58
SAFB2-201ENST00000252542 SETD1BQ9UPS6 1966 aaKnown RBP18.7■□□□□ 0.58
SAFB2-201ENST00000252542 PROSER2Q86WR7 435 aaPredicted RBP18.7■□□□□ 0.58
SAFB2-201ENST00000252542 USP19O94966 1318 aa18.7■□□□□ 0.58
SAFB2-201ENST00000252542 TEFQ10587 303 aa18.7■□□□□ 0.58
SAFB2-201ENST00000252542 IQSEC2Q5JU85 1478 aa18.7■□□□□ 0.58
SAFB2-201ENST00000252542 SIRT2Q8IXJ6 389 aa18.69■□□□□ 0.58
SAFB2-201ENST00000252542 MAP4K4O95819 1239 aaPredicted RBP18.68■□□□□ 0.58
SAFB2-201ENST00000252542 HDAC1Q13547 482 aaPredicted RBP18.68■□□□□ 0.58
SAFB2-201ENST00000252542 OS9Q13438 667 aaPredicted RBP18.68■□□□□ 0.58
SAFB2-201ENST00000252542 CABLES1Q8TDN4 633 aa18.68■□□□□ 0.58
SAFB2-201ENST00000252542 IL1RAPL2Q9NP60 686 aa18.68■□□□□ 0.58
SAFB2-201ENST00000252542 NUCB1Q02818 461 aa18.68■□□□□ 0.58
SAFB2-201ENST00000252542 SMC5Q8IY18 1101 aa18.68■□□□□ 0.58
SAFB2-201ENST00000252542 TBC1D32Q96NH3 1257 aa18.68■□□□□ 0.58
SAFB2-201ENST00000252542 HAP1P54257 671 aaPredicted RBP18.67■□□□□ 0.58
SAFB2-201ENST00000252542 HDGFL1Q5TGJ6 251 aa18.67■□□□□ 0.58
SAFB2-201ENST00000252542 PNPLA6Q8IY17 1366 aa18.67■□□□□ 0.58
SAFB2-201ENST00000252542 CHMP4BQ9H444 224 aaKnown RBP18.67■□□□□ 0.58
SAFB2-201ENST00000252542 CCDC9Q9Y3X0 531 aaKnown RBP18.67■□□□□ 0.58
SAFB2-201ENST00000252542 LRRC7Q96NW7 1537 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms