RNA–Protein interactions for RNA: ENST00000240101.2

DUSP4-202, Transcript of dual specificity phosphatase 4, humanhuman

TSL 1 (best) BASIC

Gene DUSP4, Length 2,959 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP4-202ENST00000240101 ZNF445P59923 1031 aa15.2■□□□□ 0.02
DUSP4-202ENST00000240101 PDCL2Q8N4E4 241 aa15.2■□□□□ 0.02
DUSP4-202ENST00000240101 LNPKQ9C0E8 428 aa15.2■□□□□ 0.02
DUSP4-202ENST00000240101 VWDEQ8N2E2 1590 aa15.2■□□□□ 0.02
DUSP4-202ENST00000240101 KCNJ4P48050 445 aa15.19■□□□□ 0.02
DUSP4-202ENST00000240101 SAFB2Q14151 953 aaKnown RBP eCLIP15.19■□□□□ 0.02
DUSP4-202ENST00000240101 CERS3Q8IU89 383 aa15.19■□□□□ 0.02
DUSP4-202ENST00000240101 ATP7AQ04656 1500 aa15.19■□□□□ 0.02
DUSP4-202ENST00000240101 NOB1Q9ULX3 412 aaKnown RBP15.19■□□□□ 0.02
DUSP4-202ENST00000240101 SNX21Q969T3 373 aa15.18■□□□□ 0.02
DUSP4-202ENST00000240101 KIF3AQ9Y496 699 aa15.18■□□□□ 0.02
DUSP4-202ENST00000240101 NCOA3Q9Y6Q9 1424 aa15.18■□□□□ 0.02
DUSP4-202ENST00000240101 TMEM57Q8N5G2 664 aa15.18■□□□□ 0.02
DUSP4-202ENST00000240101 C14orf93Q9H972 538 aaKnown RBP15.18■□□□□ 0.02
DUSP4-202ENST00000240101 BCL2L12Q9HB09 334 aa15.18■□□□□ 0.02
DUSP4-202ENST00000240101 CABP2Q9NPB3 220 aa15.18■□□□□ 0.02
DUSP4-202ENST00000240101 HDAC1Q13547 482 aaPredicted RBP15.17■□□□□ 0.02
DUSP4-202ENST00000240101 ATF7IPQ6VMQ6 1270 aa15.17■□□□□ 0.02
DUSP4-202ENST00000240101 MYO3AQ8NEV4 1616 aa15.17■□□□□ 0.02
DUSP4-202ENST00000240101 TTC12Q9H892 705 aaPredicted RBP15.16■□□□□ 0.02
DUSP4-202ENST00000240101 TRIM35Q9UPQ4 493 aa15.16■□□□□ 0.02
DUSP4-202ENST00000240101 NRXN1Q9ULB1 1477 aa15.16■□□□□ 0.02
DUSP4-202ENST00000240101 LMBRD1Q9NUN5 540 aa15.16■□□□□ 0.02
DUSP4-202ENST00000240101 IFT172Q9UG01 1749 aa15.16■□□□□ 0.02
DUSP4-202ENST00000240101 MROH1Q8NDA8 1641 aa15.16■□□□□ 0.02
DUSP4-202ENST00000240101 TMPOP42166 694 aaKnown RBP15.15■□□□□ 0.02
DUSP4-202ENST00000240101 PLCB2Q00722 1185 aa15.15■□□□□ 0.02
DUSP4-202ENST00000240101 TRERF1Q96PN7 1200 aa15.15■□□□□ 0.02
DUSP4-202ENST00000240101 DDX19BQ9UMR2 479 aa15.15■□□□□ 0.02
DUSP4-202ENST00000240101 NSFL1CQ9UNZ2 370 aaKnown RBP15.15■□□□□ 0.02
DUSP4-202ENST00000240101 FANCAO15360 1455 aa15.15■□□□□ 0.02
DUSP4-202ENST00000240101 MCM5P33992 734 aa15.15■□□□□ 0.02
DUSP4-202ENST00000240101 RBM25P49756 843 aaKnown RBP15.15■□□□□ 0.02
DUSP4-202ENST00000240101 FOXD4L6Q3SYB3 417 aaPredicted RBP15.15■□□□□ 0.02
DUSP4-202ENST00000240101 FOXD4L3Q6VB84 417 aaPredicted RBP15.15■□□□□ 0.02
DUSP4-202ENST00000240101 GPT2Q8TD30 523 aa15.15■□□□□ 0.02
DUSP4-202ENST00000240101 QRICH2Q9H0J4 1663 aa15.15■□□□□ 0.02
DUSP4-202ENST00000240101 GGNBP2Q9H3C7 697 aa15.15■□□□□ 0.02
DUSP4-202ENST00000240101 TMEM63CQ9P1W3 806 aa15.15■□□□□ 0.02
DUSP4-202ENST00000240101 AEBP1Q8IUX7 1158 aa15.14■□□□□ 0.01
DUSP4-202ENST00000240101 CD109Q6YHK3 1445 aa15.14■□□□□ 0.01
DUSP4-202ENST00000240101 PLEKHF1Q96S99 279 aa15.14■□□□□ 0.01
DUSP4-202ENST00000240101 KIF2CQ99661 725 aa15.14■□□□□ 0.01
DUSP4-202ENST00000240101 NEURL4Q96JN8 1562 aa15.14■□□□□ 0.01
DUSP4-202ENST00000240101 NOLC1Q14978 699 aaKnown RBP eCLIP15.13■□□□□ 0.01
DUSP4-202ENST00000240101 INO80Q9ULG1 1556 aaPredicted RBP15.13■□□□□ 0.01
DUSP4-202ENST00000240101 IRX5P78411 483 aaPredicted RBP15.13■□□□□ 0.01
DUSP4-202ENST00000240101 GGT6Q6P531 493 aa15.13■□□□□ 0.01
DUSP4-202ENST00000240101 ZBTB40Q9NUA8 1239 aa15.13■□□□□ 0.01
DUSP4-202ENST00000240101 EFCAB6Q5THR3 1501 aa15.12■□□□□ 0.01
DUSP4-202ENST00000240101 PPRC1Q5VV67 1664 aaKnown RBP15.12■□□□□ 0.01
DUSP4-202ENST00000240101 IBTKQ9P2D0 1353 aaPredicted RBP15.12■□□□□ 0.01
DUSP4-202ENST00000240101 HMGN5P82970 282 aaKnown RBP15.12■□□□□ 0.01
DUSP4-202ENST00000240101 ZBTB9Q96C00 473 aa15.12■□□□□ 0.01
DUSP4-202ENST00000240101 ADGRL1O94910 1474 aa15.11■□□□□ 0.01
DUSP4-202ENST00000240101 LRSAM1Q6UWE0 723 aa15.11■□□□□ 0.01
DUSP4-202ENST00000240101 EVC2Q86UK5 1308 aa15.11■□□□□ 0.01
DUSP4-202ENST00000240101 CT47B1P0C2W7 299 aaPredicted RBP15.11■□□□□ 0.01
DUSP4-202ENST00000240101 PRIMPOLQ96LW4 560 aa15.11■□□□□ 0.01
DUSP4-202ENST00000240101 ADGRB1O14514 1584 aa15.11■□□□□ 0.01
DUSP4-202ENST00000240101 ERICH4A6NGS2 130 aa15.1■□□□□ 0.01
DUSP4-202ENST00000240101 ANKRD36BQ8N2N9 1353 aa15.1■□□□□ 0.01
DUSP4-202ENST00000240101 ZC3H13Q5T200 1668 aaKnown RBP15.1■□□□□ 0.01
DUSP4-202ENST00000240101 SETBP1Q9Y6X0 1596 aa15.1■□□□□ 0.01
DUSP4-202ENST00000240101 NUCB1Q02818 461 aa15.1■□□□□ 0.01
DUSP4-202ENST00000240101 STK26Q9P289 416 aa15.09■□□□□ 0.01
DUSP4-202ENST00000240101 KIF16BQ96L93 1317 aa15.09■□□□□ 0.01
DUSP4-202ENST00000240101 UHRF1BP1LA0JNW5 1464 aa15.09■□□□□ 0.01
DUSP4-202ENST00000240101 ADGRB3O60242 1522 aa15.09■□□□□ 0.01
DUSP4-202ENST00000240101 ADGRB2O60241 1585 aa15.09■□□□□ 0.01
DUSP4-202ENST00000240101 C1orf115Q9H7X2 142 aa15.09■□□□□ 0.01
DUSP4-202ENST00000240101 CHD1LQ86WJ1 897 aa15.08■□□□□ 0
DUSP4-202ENST00000240101 ZGPATQ8N5A5 531 aaKnown RBP15.08■□□□□ 0
DUSP4-202ENST00000240101 USP25Q9UHP3 1055 aa15.08■□□□□ 0
DUSP4-202ENST00000240101 NCBP3Q53F19 620 aaKnown RBP15.08■□□□□ 0
DUSP4-202ENST00000240101 TAF3Q5VWG9 929 aa15.08■□□□□ 0
DUSP4-202ENST00000240101 RIOK3O14730 519 aaKnown RBP15.07■□□□□ 0
DUSP4-202ENST00000240101 SRPK2P78362 688 aaKnown RBP15.07■□□□□ 0
DUSP4-202ENST00000240101 ANKRD45Q5TZF3 282 aa15.07■□□□□ 0
DUSP4-202ENST00000240101 ARAP3Q8WWN8 1544 aa15.07■□□□□ 0
DUSP4-202ENST00000240101 TULP4Q9NRJ4 1543 aa15.07■□□□□ 0
DUSP4-202ENST00000240101 NPATQ14207 1427 aa15.07■□□□□ 0
DUSP4-202ENST00000240101 A0A1W2PP64 1363 aa15.07■□□□□ 0
DUSP4-202ENST00000240101 USP32Q8NFA0 1604 aa15.06■□□□□ 0
DUSP4-202ENST00000240101 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.06■□□□□ 0
DUSP4-202ENST00000240101 FBLN1P23142 703 aa15.06■□□□□ 0
DUSP4-202ENST00000240101 PIBF1Q8WXW3 757 aa15.06■□□□□ 0
DUSP4-202ENST00000240101 ZFP91Q96JP5 570 aaPredicted RBP15.06■□□□□ 0
DUSP4-202ENST00000240101 NUCB2P80303 420 aa15.06■□□□□ 0
DUSP4-202ENST00000240101 IPO8O15397 1037 aaKnown RBP15.05■□□□□ 0
DUSP4-202ENST00000240101 TBC1D9Q6ZT07 1266 aa15.05■□□□□ 0
DUSP4-202ENST00000240101 PPLO60437 1756 aa15.05■□□□□ -0
DUSP4-202ENST00000240101 ABCA9Q8IUA7 1624 aa15.05■□□□□ -0
DUSP4-202ENST00000240101 FYB1O15117 783 aa15.05■□□□□ -0
DUSP4-202ENST00000240101 TSPY26PQ9H489 355 aa15.05■□□□□ -0
DUSP4-202ENST00000240101 NSD2O96028 1365 aa15.05■□□□□ -0
DUSP4-202ENST00000240101 CHAF1AQ13111 956 aaPredicted RBP15.04■□□□□ -0
DUSP4-202ENST00000240101 THUMPD2Q9BTF0 503 aaKnown RBP15.03■□□□□ -0
DUSP4-202ENST00000240101 ELL2O00472 640 aaPredicted RBP15.03■□□□□ -0
DUSP4-202ENST00000240101 KIDINS220Q9ULH0 1771 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms