RNA–Protein interactions for RNA: ENST00000238682.7

TGFB3-201, Transcript of transforming growth factor beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB3, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-201ENST00000238682 THRAP3Q9Y2W1 955 aaKnown RBP12.64□□□□□ -0.39
TGFB3-201ENST00000238682 PARD3Q8TEW0 1356 aa12.64□□□□□ -0.39
TGFB3-201ENST00000238682 LMO7Q8WWI1 1683 aa12.64□□□□□ -0.39
TGFB3-201ENST00000238682 AKAP12Q02952 1782 aa12.64□□□□□ -0.39
TGFB3-201ENST00000238682 USP6P35125 1406 aa12.64□□□□□ -0.39
TGFB3-201ENST00000238682 XPCQ01831 940 aaPredicted RBP12.63□□□□□ -0.39
TGFB3-201ENST00000238682 NLRP13Q86W25 1043 aa12.63□□□□□ -0.39
TGFB3-201ENST00000238682 NUTM2FA1L443 756 aa12.63□□□□□ -0.39
TGFB3-201ENST00000238682 SPATA31A5Q5VU36 1347 aa12.63□□□□□ -0.39
TGFB3-201ENST00000238682 SPATA31A7Q8IWB4 1347 aa12.63□□□□□ -0.39
TGFB3-201ENST00000238682 SAFB2Q14151 953 aaKnown RBP eCLIP12.62□□□□□ -0.39
TGFB3-201ENST00000238682 PMFBP1Q8TBY8 1022 aa12.62□□□□□ -0.39
TGFB3-201ENST00000238682 ACEP12821 1306 aa12.62□□□□□ -0.39
TGFB3-201ENST00000238682 SSH2Q76I76 1423 aa12.62□□□□□ -0.39
TGFB3-201ENST00000238682 BARGINQ6ZT62 677 aa12.62□□□□□ -0.39
TGFB3-201ENST00000238682 MON2Q7Z3U7 1717 aa12.62□□□□□ -0.39
TGFB3-201ENST00000238682 TERF2IPQ9NYB0 399 aa12.62□□□□□ -0.39
TGFB3-201ENST00000238682 DDX10Q13206 875 aaKnown RBP12.61□□□□□ -0.39
TGFB3-201ENST00000238682 SF3B2Q13435 895 aaKnown RBP12.61□□□□□ -0.39
TGFB3-201ENST00000238682 SPRYD3Q8NCJ5 442 aa12.61□□□□□ -0.39
TGFB3-201ENST00000238682 AATKQ6ZMQ8 1374 aa12.6□□□□□ -0.39
TGFB3-201ENST00000238682 ANKRD26Q9UPS8 1709 aa12.6□□□□□ -0.39
TGFB3-201ENST00000238682 DHX37Q8IY37 1157 aaKnown RBP12.6□□□□□ -0.39
TGFB3-201ENST00000238682 CPSF1Q10570 1443 aaKnown RBP12.6□□□□□ -0.39
TGFB3-201ENST00000238682 FAM83GA6ND36 823 aa12.6□□□□□ -0.39
TGFB3-201ENST00000238682 PRDM11Q9NQV5 511 aa12.6□□□□□ -0.39
TGFB3-201ENST00000238682 SRPK2P78362 688 aaKnown RBP12.59□□□□□ -0.39
TGFB3-201ENST00000238682 RALBP1Q15311 655 aa12.59□□□□□ -0.39
TGFB3-201ENST00000238682 KRT27Q7Z3Y8 459 aa12.59□□□□□ -0.39
TGFB3-201ENST00000238682 SEPT12Q8IYM1 358 aa12.59□□□□□ -0.39
TGFB3-201ENST00000238682 CDCA7Q9BWT1 371 aaPredicted RBP12.59□□□□□ -0.39
TGFB3-201ENST00000238682 HDGFL2Q7Z4V5 671 aaPredicted RBP12.59□□□□□ -0.39
TGFB3-201ENST00000238682 KCNH5Q8NCM2 988 aa12.59□□□□□ -0.39
TGFB3-201ENST00000238682 USP31Q70CQ4 1352 aa12.59□□□□□ -0.39
TGFB3-201ENST00000238682 CCER2I3L3R5 266 aa12.58□□□□□ -0.4
TGFB3-201ENST00000238682 ANP32CO43423 234 aa12.58□□□□□ -0.4
TGFB3-201ENST00000238682 LMOD2Q6P5Q4 547 aa12.58□□□□□ -0.4
TGFB3-201ENST00000238682 ZRANB1Q9UGI0 708 aa12.58□□□□□ -0.4
TGFB3-201ENST00000238682 PARP4Q9UKK3 1724 aaKnown RBP12.58□□□□□ -0.4
TGFB3-201ENST00000238682 CGNL1Q0VF96 1302 aa12.58□□□□□ -0.4
TGFB3-201ENST00000238682 SPATA31A1Q5TZJ5 1347 aa12.58□□□□□ -0.4
TGFB3-201ENST00000238682 LRP5O75197 1615 aa12.58□□□□□ -0.4
TGFB3-201ENST00000238682 RGPD3A6NKT7 1758 aaPredicted RBP12.58□□□□□ -0.4
TGFB3-201ENST00000238682 RGPD4Q7Z3J3 1758 aa12.58□□□□□ -0.4
TGFB3-201ENST00000238682 BCL9O00512 1426 aa12.58□□□□□ -0.4
TGFB3-201ENST00000238682 EDC4Q6P2E9 1401 aaKnown RBP12.58□□□□□ -0.4
TGFB3-201ENST00000238682 PER1O15534 1290 aaPredicted RBP12.57□□□□□ -0.4
TGFB3-201ENST00000238682 CCDC9Q9Y3X0 531 aaKnown RBP12.57□□□□□ -0.4
TGFB3-201ENST00000238682 CD163L1Q9NR16 1453 aa12.57□□□□□ -0.4
TGFB3-201ENST00000238682 BTG4Q9NY30 223 aa12.57□□□□□ -0.4
TGFB3-201ENST00000238682 KIAA0232Q92628 1395 aa12.57□□□□□ -0.4
TGFB3-201ENST00000238682 PAK3O75914 559 aaPredicted RBP12.56□□□□□ -0.4
TGFB3-201ENST00000238682 KIF20BQ96Q89 1820 aa12.56□□□□□ -0.4
TGFB3-201ENST00000238682 BRWD3Q6RI45 1802 aa12.56□□□□□ -0.4
TGFB3-201ENST00000238682 BAG6P46379 1132 aa12.56□□□□□ -0.4
TGFB3-201ENST00000238682 ZNF428Q96B54 188 aa12.55□□□□□ -0.4
TGFB3-201ENST00000238682 KNSTRNQ9Y448 316 aa12.55□□□□□ -0.4
TGFB3-201ENST00000238682 CRB1P82279 1406 aa12.55□□□□□ -0.4
TGFB3-201ENST00000238682 PIK3C2AO00443 1686 aa12.55□□□□□ -0.4
TGFB3-201ENST00000238682 VASPP50552 380 aaPredicted RBP12.55□□□□□ -0.4
TGFB3-201ENST00000238682 ABTB2Q8N961 1025 aa12.55□□□□□ -0.4
TGFB3-201ENST00000238682 PANK3Q9H999 370 aa12.55□□□□□ -0.4
TGFB3-201ENST00000238682 COL5A2P05997 1499 aaPredicted RBP12.54□□□□□ -0.4
TGFB3-201ENST00000238682 PDIA4P13667 645 aaKnown RBP12.54□□□□□ -0.4
TGFB3-201ENST00000238682 FAM196AQ6ZSG2 479 aa12.54□□□□□ -0.4
TGFB3-201ENST00000238682 CABLES1Q8TDN4 633 aa12.54□□□□□ -0.4
TGFB3-201ENST00000238682 WNK3Q9BYP7 1800 aa12.53□□□□□ -0.4
TGFB3-201ENST00000238682 CABP2Q9NPB3 220 aa12.53□□□□□ -0.4
TGFB3-201ENST00000238682 TNS1Q9HBL0 1735 aaKnown RBP12.53□□□□□ -0.4
TGFB3-201ENST00000238682 A0A1W2PP64 1363 aa12.53□□□□□ -0.4
TGFB3-201ENST00000238682 INSRP06213 1382 aa12.53□□□□□ -0.4
TGFB3-201ENST00000238682 TCP11L2Q8N4U5 519 aa12.52□□□□□ -0.4
TGFB3-201ENST00000238682 FAM208AQ9UK61 1670 aaKnown RBP12.52□□□□□ -0.4
TGFB3-201ENST00000238682 NFAT5O94916 1531 aa12.52□□□□□ -0.4
TGFB3-201ENST00000238682 NSD3Q9BZ95 1437 aa12.52□□□□□ -0.41
TGFB3-201ENST00000238682 GCP02774 474 aa12.52□□□□□ -0.41
TGFB3-201ENST00000238682 CDK11BP21127 795 aaKnown RBP12.52□□□□□ -0.41
TGFB3-201ENST00000238682 CAMTA1Q9Y6Y1 1673 aa12.51□□□□□ -0.41
TGFB3-201ENST00000238682 COL18A1P39060 1754 aa12.51□□□□□ -0.41
TGFB3-201ENST00000238682 SLC4A2P04920 1241 aa12.51□□□□□ -0.41
TGFB3-201ENST00000238682 TTC21BQ7Z4L5 1316 aa12.51□□□□□ -0.41
TGFB3-201ENST00000238682 EVA1CP58658 441 aa12.51□□□□□ -0.41
TGFB3-201ENST00000238682 PRKRIP1Q9H875 184 aaPredicted RBP12.5□□□□□ -0.41
TGFB3-201ENST00000238682 CABP1Q9NZU7 370 aa12.5□□□□□ -0.41
TGFB3-201ENST00000238682 TMC1Q8TDI8 760 aa12.49□□□□□ -0.41
TGFB3-201ENST00000238682 SLC12A5Q9H2X9 1139 aa12.49□□□□□ -0.41
TGFB3-201ENST00000238682 MYBBP1AQ9BQG0 1328 aaKnown RBP12.49□□□□□ -0.41
TGFB3-201ENST00000238682 RREB1Q92766 1687 aa12.49□□□□□ -0.41
TGFB3-201ENST00000238682 HMGB2P26583 209 aaKnown RBP12.49□□□□□ -0.41
TGFB3-201ENST00000238682 CNKSR2Q8WXI2 1034 aa12.49□□□□□ -0.41
TGFB3-201ENST00000238682 POLR3GLQ9BT43 218 aa12.49□□□□□ -0.41
TGFB3-201ENST00000238682 OVOS2A0A0G2JMS6 1433 aa12.48□□□□□ -0.41
TGFB3-201ENST00000238682 OVOS2A0A0J9YW53 1432 aa12.48□□□□□ -0.41
TGFB3-201ENST00000238682 OVOS2Q6IE36 1432 aa12.48□□□□□ -0.41
TGFB3-201ENST00000238682 FAM98CQ17RN3 349 aaKnown RBP12.48□□□□□ -0.41
TGFB3-201ENST00000238682 PKNOX2Q96KN3 472 aa12.48□□□□□ -0.41
TGFB3-201ENST00000238682 WDR17Q8IZU2 1322 aa12.48□□□□□ -0.41
TGFB3-201ENST00000238682 PEAK1Q9H792 1746 aa12.47□□□□□ -0.41
TGFB3-201ENST00000238682 NLRP6P59044 892 aa12.47□□□□□ -0.41
TGFB3-201ENST00000238682 LRRC37A3O60309 1634 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms