RNA–Protein interactions for RNA: ENST00000237380.11

MED28-201, Transcript of mediator complex subunit 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MED28, Length 10,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-201ENST00000237380 EPB41L2O43491 1005 aaKnown RBP8.78□□□□□ -1
MED28-201ENST00000237380 PRDM11Q9NQV5 511 aa8.78□□□□□ -1
MED28-201ENST00000237380 PANK3Q9H999 370 aa8.78□□□□□ -1
MED28-201ENST00000237380 CWC15Q9P013 229 aaKnown RBP8.78□□□□□ -1
MED28-201ENST00000237380 C11orf95C9JLR9 678 aaPredicted RBP8.78□□□□□ -1
MED28-201ENST00000237380 KINO60870 393 aaKnown RBP8.78□□□□□ -1
MED28-201ENST00000237380 ATP2B2Q01814 1243 aa8.78□□□□□ -1
MED28-201ENST00000237380 PPM1EQ8WY54 764 aa8.78□□□□□ -1
MED28-201ENST00000237380 IPO9Q96P70 1041 aaKnown RBP8.78□□□□□ -1
MED28-201ENST00000237380 STXBP4Q6ZWJ1 553 aa8.77□□□□□ -1
MED28-201ENST00000237380 PIBF1Q8WXW3 757 aa8.77□□□□□ -1
MED28-201ENST00000237380 FAM13BQ9NYF5 915 aa8.77□□□□□ -1
MED28-201ENST00000237380 HOOK3Q86VS8 718 aa8.77□□□□□ -1.01
MED28-201ENST00000237380 DDX49Q9Y6V7 483 aaKnown RBP8.77□□□□□ -1.01
MED28-201ENST00000237380 NOP2P46087 812 aaKnown RBP8.77□□□□□ -1.01
MED28-201ENST00000237380 RPGRQ92834 1020 aaKnown RBP8.77□□□□□ -1.01
MED28-201ENST00000237380 KRT32Q14532 448 aa8.77□□□□□ -1.01
MED28-201ENST00000237380 FAM161AQ3B820 660 aa8.77□□□□□ -1.01
MED28-201ENST00000237380 DDX12PQ92771 950 aa8.77□□□□□ -1.01
MED28-201ENST00000237380 CCDC196A0A1B0GTZ2 297 aa8.77□□□□□ -1.01
MED28-201ENST00000237380 NUTM2BA6NNL0 878 aaPredicted RBP8.77□□□□□ -1.01
MED28-201ENST00000237380 NUTM2EB1AL46 878 aaPredicted RBP8.77□□□□□ -1.01
MED28-201ENST00000237380 NUTM2AQ8IVF1 878 aaPredicted RBP8.77□□□□□ -1.01
MED28-201ENST00000237380 PLIN1O60240 522 aa8.77□□□□□ -1.01
MED28-201ENST00000237380 AEBP1Q8IUX7 1158 aa8.77□□□□□ -1.01
MED28-201ENST00000237380 ZNF428Q96B54 188 aa8.77□□□□□ -1.01
MED28-201ENST00000237380 USP47Q96K76 1375 aa8.77□□□□□ -1.01
MED28-201ENST00000237380 APBB1IPQ7Z5R6 666 aaPredicted RBP8.76□□□□□ -1.01
MED28-201ENST00000237380 SYNJ1O43426 1573 aa8.76□□□□□ -1.01
MED28-201ENST00000237380 PIP4K2BP78356 416 aa8.76□□□□□ -1.01
MED28-201ENST00000237380 LRSAM1Q6UWE0 723 aa8.76□□□□□ -1.01
MED28-201ENST00000237380 ZNF397Q8NF99 534 aaPredicted RBP8.76□□□□□ -1.01
MED28-201ENST00000237380 ST20-MTHFSA0A0A6YYL1 179 aa8.76□□□□□ -1.01
MED28-201ENST00000237380 MTHFSP49914 203 aa8.76□□□□□ -1.01
MED28-201ENST00000237380 NBPF8Q3BBV2 869 aa8.76□□□□□ -1.01
MED28-201ENST00000237380 NBPF14Q5TI25 921 aa8.76□□□□□ -1.01
MED28-201ENST00000237380 SSX2IPQ9Y2D8 614 aa8.76□□□□□ -1.01
MED28-201ENST00000237380 PHAXQ9H814 394 aaKnown RBP8.76□□□□□ -1.01
MED28-201ENST00000237380 SEPT11Q9NVA2 429 aaKnown RBP8.76□□□□□ -1.01
MED28-201ENST00000237380 TOM1O60784 492 aa8.76□□□□□ -1.01
MED28-201ENST00000237380 ANAPC15P60006 121 aa8.76□□□□□ -1.01
MED28-201ENST00000237380 SCLT1Q96NL6 688 aa8.76□□□□□ -1.01
MED28-201ENST00000237380 PYM1Q9BRP8 204 aaKnown RBP8.76□□□□□ -1.01
MED28-201ENST00000237380 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.76□□□□□ -1.01
MED28-201ENST00000237380 FSD1Q9BTV5 496 aa8.76□□□□□ -1.01
MED28-201ENST00000237380 CUL7Q14999 1698 aa8.76□□□□□ -1.01
MED28-201ENST00000237380 MNS1Q8NEH6 495 aa8.76□□□□□ -1.01
MED28-201ENST00000237380 GNAI2P04899 355 aa8.76□□□□□ -1.01
MED28-201ENST00000237380 AMOTQ4VCS5 1084 aa8.76□□□□□ -1.01
MED28-201ENST00000237380 CAVIN1Q6NZI2 390 aaKnown RBP8.76□□□□□ -1.01
MED28-201ENST00000237380 MAP7D2Q96T17 732 aa8.76□□□□□ -1.01
MED28-201ENST00000237380 ST5P78524 1137 aa8.76□□□□□ -1.01
MED28-201ENST00000237380 ATAD2Q6PL18 1390 aa8.75□□□□□ -1.01
MED28-201ENST00000237380 SDF4Q9BRK5 362 aa8.75□□□□□ -1.01
MED28-201ENST00000237380 EHBP1L1Q8N3D4 1523 aa8.75□□□□□ -1.01
MED28-201ENST00000237380 CETN1Q12798 172 aa8.75□□□□□ -1.01
MED28-201ENST00000237380 AIMP1Q12904 312 aaKnown RBP8.75□□□□□ -1.01
MED28-201ENST00000237380 CCDC12Q8WUD4 166 aaPredicted RBP8.75□□□□□ -1.01
MED28-201ENST00000237380 ANKRD18BA2A2Z9 1011 aa8.75□□□□□ -1.01
MED28-201ENST00000237380 CBFA2T2O43439 604 aa8.75□□□□□ -1.01
MED28-201ENST00000237380 NCBP1Q09161 790 aaKnown RBP8.75□□□□□ -1.01
MED28-201ENST00000237380 CRACR2BQ8N4Y2 399 aaPredicted RBP8.75□□□□□ -1.01
MED28-201ENST00000237380 NOL8Q76FK4 1167 aaKnown RBP8.75□□□□□ -1.01
MED28-201ENST00000237380 USP37Q86T82 979 aa8.75□□□□□ -1.01
MED28-201ENST00000237380 VPS36Q86VN1 386 aa8.75□□□□□ -1.01
MED28-201ENST00000237380 CRBNQ96SW2 442 aa8.75□□□□□ -1.01
MED28-201ENST00000237380 UBAC1Q9BSL1 405 aa8.75□□□□□ -1.01
MED28-201ENST00000237380 POLD1P28340 1107 aa8.75□□□□□ -1.01
MED28-201ENST00000237380 CCDC82Q8N4S0 544 aa8.75□□□□□ -1.01
MED28-201ENST00000237380 MAP3K1Q13233 1512 aa8.74□□□□□ -1.01
MED28-201ENST00000237380 CCDC178Q5BJE1 867 aa8.74□□□□□ -1.01
MED28-201ENST00000237380 SPTY2D1Q68D10 685 aaPredicted RBP8.74□□□□□ -1.01
MED28-201ENST00000237380 HMGB3O15347 200 aaKnown RBP8.74□□□□□ -1.01
MED28-201ENST00000237380 SSFA2P28290 1259 aa8.74□□□□□ -1.01
MED28-201ENST00000237380 INCENPQ9NQS7 918 aa8.74□□□□□ -1.01
MED28-201ENST00000237380 FGD5Q6ZNL6 1462 aa8.74□□□□□ -1.01
MED28-201ENST00000237380 ZGPATQ8N5A5 531 aaKnown RBP8.74□□□□□ -1.01
MED28-201ENST00000237380 TEX14Q8IWB6 1497 aa8.74□□□□□ -1.01
MED28-201ENST00000237380 RSPH6AQ9H0K4 717 aa8.74□□□□□ -1.01
MED28-201ENST00000237380 FBXO3Q9UK99 471 aa8.74□□□□□ -1.01
MED28-201ENST00000237380 KIF14Q15058 1648 aa8.74□□□□□ -1.01
MED28-201ENST00000237380 DEKP35659 375 aaKnown RBP8.74□□□□□ -1.01
MED28-201ENST00000237380 BEGAINQ9BUH8 593 aa8.74□□□□□ -1.01
MED28-201ENST00000237380 HDAC9Q9UKV0 1011 aa8.74□□□□□ -1.01
MED28-201ENST00000237380 MTERF4Q7Z6M4 381 aaKnown RBP8.73□□□□□ -1.01
MED28-201ENST00000237380 L3MBTL2Q969R5 705 aa8.73□□□□□ -1.01
MED28-201ENST00000237380 TMOD3Q9NYL9 352 aa8.73□□□□□ -1.01
MED28-201ENST00000237380 SLC4A3P48751 1232 aa8.73□□□□□ -1.01
MED28-201ENST00000237380 CCDC141Q6ZP82 1450 aa8.73□□□□□ -1.01
MED28-201ENST00000237380 CLUAP1Q96AJ1 413 aa8.73□□□□□ -1.01
MED28-201ENST00000237380 LRRC27Q9C0I9 530 aa8.73□□□□□ -1.01
MED28-201ENST00000237380 LDHCP07864 332 aa8.73□□□□□ -1.01
MED28-201ENST00000237380 NGLY1Q96IV0 654 aa8.73□□□□□ -1.01
MED28-201ENST00000237380 LAMC3Q9Y6N6 1575 aa8.73□□□□□ -1.01
MED28-201ENST00000237380 ANKRD62A6NC57 917 aa8.73□□□□□ -1.01
MED28-201ENST00000237380 HMGXB3Q12766 1538 aa8.73□□□□□ -1.01
MED28-201ENST00000237380 GSTO1P78417 241 aa8.73□□□□□ -1.01
MED28-201ENST00000237380 CFAP45Q9UL16 551 aa8.73□□□□□ -1.01
MED28-201ENST00000237380 GCC1Q96CN9 775 aa8.73□□□□□ -1.01
MED28-201ENST00000237380 RTEL1-TNFRSF6BF6WH68 1400 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms