RNA–Protein interactions for RNA: ENST00000235349.5

PRAMEF4-201, Transcript of PRAME family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF4, Length 1,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4-201ENST00000235349 SOS2Q07890 1332 aaPredicted RBP13.39□□□□□ -0.27
PRAMEF4-201ENST00000235349 FANCIQ9NVI1 1328 aa13.39□□□□□ -0.27
PRAMEF4-201ENST00000235349 HOXC9P31274 260 aa13.39□□□□□ -0.27
PRAMEF4-201ENST00000235349 PLEKHF1Q96S99 279 aa13.39□□□□□ -0.27
PRAMEF4-201ENST00000235349 MED1Q15648 1581 aaPredicted RBP13.38□□□□□ -0.27
PRAMEF4-201ENST00000235349 TCP11L2Q8N4U5 519 aa13.38□□□□□ -0.27
PRAMEF4-201ENST00000235349 RRP7AQ9Y3A4 280 aaKnown RBP13.38□□□□□ -0.27
PRAMEF4-201ENST00000235349 KCNH5Q8NCM2 988 aa13.37□□□□□ -0.27
PRAMEF4-201ENST00000235349 CDCA7LQ96GN5 454 aa13.37□□□□□ -0.27
PRAMEF4-201ENST00000235349 TNS3Q68CZ2 1445 aa13.37□□□□□ -0.27
PRAMEF4-201ENST00000235349 SLIT3O75094 1523 aa13.37□□□□□ -0.27
PRAMEF4-201ENST00000235349 ZC3H6P61129 1189 aaKnown RBP13.36□□□□□ -0.27
PRAMEF4-201ENST00000235349 NEUROD2Q15784 382 aa13.36□□□□□ -0.27
PRAMEF4-201ENST00000235349 ARHGEF25Q86VW2 580 aa13.36□□□□□ -0.27
PRAMEF4-201ENST00000235349 LTV1Q96GA3 475 aaPredicted RBP13.36□□□□□ -0.27
PRAMEF4-201ENST00000235349 RSPH6AQ9H0K4 717 aa13.36□□□□□ -0.27
PRAMEF4-201ENST00000235349 FLT4P35916 1363 aa13.36□□□□□ -0.27
PRAMEF4-201ENST00000235349 NHSL1Q5SYE7 1610 aa13.36□□□□□ -0.27
PRAMEF4-201ENST00000235349 RGPD5Q99666 1765 aa13.36□□□□□ -0.27
PRAMEF4-201ENST00000235349 ROBO1Q9Y6N7 1651 aa13.36□□□□□ -0.27
PRAMEF4-201ENST00000235349 FCHSD2O94868 740 aa13.36□□□□□ -0.27
PRAMEF4-201ENST00000235349 AEBP1Q8IUX7 1158 aa13.36□□□□□ -0.27
PRAMEF4-201ENST00000235349 IP6K1Q92551 441 aa13.36□□□□□ -0.27
PRAMEF4-201ENST00000235349 PHACTR3Q96KR7 559 aa13.35□□□□□ -0.27
PRAMEF4-201ENST00000235349 PRKAR2BP31323 418 aa13.34□□□□□ -0.27
PRAMEF4-201ENST00000235349 RGPD2P0DJD1 1756 aa13.34□□□□□ -0.27
PRAMEF4-201ENST00000235349 SULT6B1Q6IMI4 303 aa13.34□□□□□ -0.27
PRAMEF4-201ENST00000235349 EYA1Q99502 592 aa13.34□□□□□ -0.27
PRAMEF4-201ENST00000235349 AXIN2Q9Y2T1 843 aa13.34□□□□□ -0.27
PRAMEF4-201ENST00000235349 CRYBG1Q9Y4K1 1723 aa13.33□□□□□ -0.28
PRAMEF4-201ENST00000235349 ZNF521Q96K83 1311 aa13.33□□□□□ -0.28
PRAMEF4-201ENST00000235349 PIP4K2BP78356 416 aa13.33□□□□□ -0.28
PRAMEF4-201ENST00000235349 RGPD1P0DJD0 1748 aa13.33□□□□□ -0.28
PRAMEF4-201ENST00000235349 ARHGEF10O15013 1369 aa13.33□□□□□ -0.28
PRAMEF4-201ENST00000235349 KIF24Q5T7B8 1368 aa13.33□□□□□ -0.28
PRAMEF4-201ENST00000235349 PHRF1Q9P1Y6 1649 aaKnown RBP13.33□□□□□ -0.28
PRAMEF4-201ENST00000235349 IQSEC2Q5JU85 1478 aa13.32□□□□□ -0.28
PRAMEF4-201ENST00000235349 TMPOP42166 694 aaKnown RBP13.32□□□□□ -0.28
PRAMEF4-201ENST00000235349 WWC1Q8IX03 1113 aa13.32□□□□□ -0.28
PRAMEF4-201ENST00000235349 SPINK5Q9NQ38 1064 aaPredicted RBP13.32□□□□□ -0.28
PRAMEF4-201ENST00000235349 TOM1O60784 492 aa13.31□□□□□ -0.28
PRAMEF4-201ENST00000235349 CHRNA2Q15822 529 aa13.31□□□□□ -0.28
PRAMEF4-201ENST00000235349 MAPK8IP3Q9UPT6 1336 aa13.3□□□□□ -0.28
PRAMEF4-201ENST00000235349 UBAP1LF5GYI3 381 aa13.3□□□□□ -0.28
PRAMEF4-201ENST00000235349 USHBP1Q8N6Y0 703 aa13.3□□□□□ -0.28
PRAMEF4-201ENST00000235349 LRRC59Q96AG4 307 aaKnown RBP13.3□□□□□ -0.28
PRAMEF4-201ENST00000235349 PNNQ9H307 717 aaKnown RBP13.3□□□□□ -0.28
PRAMEF4-201ENST00000235349 RTL1A6NKG5 1358 aa13.3□□□□□ -0.28
PRAMEF4-201ENST00000235349 COL18A1P39060 1754 aa13.3□□□□□ -0.28
PRAMEF4-201ENST00000235349 PDE3BQ13370 1112 aa13.29□□□□□ -0.28
PRAMEF4-201ENST00000235349 NBPF6Q5VWK0 638 aa13.29□□□□□ -0.28
PRAMEF4-201ENST00000235349 NBPF4Q96M43 638 aa13.29□□□□□ -0.28
PRAMEF4-201ENST00000235349 PHF23Q9BUL5 403 aaPredicted RBP13.29□□□□□ -0.28
PRAMEF4-201ENST00000235349 TRIM35Q9UPQ4 493 aa13.29□□□□□ -0.28
PRAMEF4-201ENST00000235349 DLG5Q8TDM6 1919 aa13.29□□□□□ -0.28
PRAMEF4-201ENST00000235349 IGSF1Q8N6C5 1336 aa13.29□□□□□ -0.28
PRAMEF4-201ENST00000235349 MSH5O43196 834 aa13.29□□□□□ -0.28
PRAMEF4-201ENST00000235349 RIPK4P57078 832 aa13.29□□□□□ -0.28
PRAMEF4-201ENST00000235349 GOLGA2Q08379 1002 aa13.28□□□□□ -0.28
PRAMEF4-201ENST00000235349 CERKQ8TCT0 537 aa13.28□□□□□ -0.28
PRAMEF4-201ENST00000235349 ANKRD24Q8TF21 1146 aa13.28□□□□□ -0.28
PRAMEF4-201ENST00000235349 KIAA0232Q92628 1395 aa13.28□□□□□ -0.28
PRAMEF4-201ENST00000235349 AHDC1Q5TGY3 1603 aaPredicted RBP13.28□□□□□ -0.28
PRAMEF4-201ENST00000235349 SLFN5Q08AF3 891 aa13.27□□□□□ -0.28
PRAMEF4-201ENST00000235349 NGEFQ8N5V2 710 aa13.27□□□□□ -0.28
PRAMEF4-201ENST00000235349 NFE2L2Q16236 605 aa13.27□□□□□ -0.29
PRAMEF4-201ENST00000235349 PHLPP1O60346 1717 aa13.27□□□□□ -0.29
PRAMEF4-201ENST00000235349 ABCA3Q99758 1704 aa13.27□□□□□ -0.29
PRAMEF4-201ENST00000235349 CCDC27Q2M243 656 aa13.26□□□□□ -0.29
PRAMEF4-201ENST00000235349 DUSP27Q5VZP5 1158 aa13.26□□□□□ -0.29
PRAMEF4-201ENST00000235349 TRMT2AQ8IZ69 625 aaKnown RBP13.26□□□□□ -0.29
PRAMEF4-201ENST00000235349 KDRP35968 1356 aa13.25□□□□□ -0.29
PRAMEF4-201ENST00000235349 NEFMP07197 916 aa13.25□□□□□ -0.29
PRAMEF4-201ENST00000235349 HAP1P54257 671 aaPredicted RBP13.25□□□□□ -0.29
PRAMEF4-201ENST00000235349 NCBP3Q53F19 620 aaKnown RBP13.25□□□□□ -0.29
PRAMEF4-201ENST00000235349 CPDO75976 1380 aa13.24□□□□□ -0.29
PRAMEF4-201ENST00000235349 FAM83GA6ND36 823 aa13.24□□□□□ -0.29
PRAMEF4-201ENST00000235349 MTHFSDQ2M296 383 aaKnown RBP13.24□□□□□ -0.29
PRAMEF4-201ENST00000235349 WDR63Q8IWG1 891 aa13.24□□□□□ -0.29
PRAMEF4-201ENST00000235349 COL16A1Q07092 1604 aaPredicted RBP13.23□□□□□ -0.29
PRAMEF4-201ENST00000235349 THUMPD2Q9BTF0 503 aaKnown RBP13.23□□□□□ -0.29
PRAMEF4-201ENST00000235349 PRDM11Q9NQV5 511 aa13.23□□□□□ -0.29
PRAMEF4-201ENST00000235349 PPP4R2Q9NY27 417 aa13.23□□□□□ -0.29
PRAMEF4-201ENST00000235349 DCTN1Q14203 1278 aa13.23□□□□□ -0.29
PRAMEF4-201ENST00000235349 ERBB3P21860 1342 aa13.22□□□□□ -0.29
PRAMEF4-201ENST00000235349 CAMTA1Q9Y6Y1 1673 aa13.22□□□□□ -0.29
PRAMEF4-201ENST00000235349 E9PSI1 815 aa13.22□□□□□ -0.29
PRAMEF4-201ENST00000235349 NLRP2Q9NX02 1062 aa13.21□□□□□ -0.29
PRAMEF4-201ENST00000235349 CSB-PGBD3P0DP91 1061 aa13.2□□□□□ -0.3
PRAMEF4-201ENST00000235349 COL22A1Q8NFW1 1626 aaPredicted RBP13.19□□□□□ -0.3
PRAMEF4-201ENST00000235349 TSR2Q969E8 191 aaKnown RBP13.19□□□□□ -0.3
PRAMEF4-201ENST00000235349 LMO7Q8WWI1 1683 aa13.19□□□□□ -0.3
PRAMEF4-201ENST00000235349 NUTM2BA6NNL0 878 aaPredicted RBP13.18□□□□□ -0.3
PRAMEF4-201ENST00000235349 NUTM2EB1AL46 878 aaPredicted RBP13.18□□□□□ -0.3
PRAMEF4-201ENST00000235349 NCAPD2Q15021 1401 aa13.18□□□□□ -0.3
PRAMEF4-201ENST00000235349 MCM10Q7L590 875 aa13.18□□□□□ -0.3
PRAMEF4-201ENST00000235349 NUTM2AQ8IVF1 878 aaPredicted RBP13.18□□□□□ -0.3
PRAMEF4-201ENST00000235349 RCAN3Q9UKA8 241 aa13.18□□□□□ -0.3
PRAMEF4-201ENST00000235349 IRX6P78412 446 aaPredicted RBP13.18□□□□□ -0.3
PRAMEF4-201ENST00000235349 LAS1LQ9Y4W2 734 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms