RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 AAMPQ13685 434 aa11.52□□□□□ -0.56
SYDE2-201ENST00000234668 SIRT2Q8IXJ6 389 aa11.52□□□□□ -0.56
SYDE2-201ENST00000234668 NUTM2GQ5VZR2 741 aa11.52□□□□□ -0.57
SYDE2-201ENST00000234668 CHD1LQ86WJ1 897 aa11.52□□□□□ -0.57
SYDE2-201ENST00000234668 USP32Q8NFA0 1604 aa11.52□□□□□ -0.57
SYDE2-201ENST00000234668 FOXO3O43524 673 aa11.51□□□□□ -0.57
SYDE2-201ENST00000234668 C16orf71Q8IYS4 520 aaPredicted RBP11.51□□□□□ -0.57
SYDE2-201ENST00000234668 ANTXR1Q9H6X2 564 aa11.51□□□□□ -0.57
SYDE2-201ENST00000234668 ZMYM3Q14202 1370 aa11.51□□□□□ -0.57
SYDE2-201ENST00000234668 ADGRB2O60241 1585 aa11.51□□□□□ -0.57
SYDE2-201ENST00000234668 GNAI1P63096 354 aa11.51□□□□□ -0.57
SYDE2-201ENST00000234668 NUCB1Q02818 461 aa11.51□□□□□ -0.57
SYDE2-201ENST00000234668 LRRC7Q96NW7 1537 aa11.51□□□□□ -0.57
SYDE2-201ENST00000234668 LTKP29376 864 aa11.5□□□□□ -0.57
SYDE2-201ENST00000234668 ALDH1L2Q3SY69 923 aa11.5□□□□□ -0.57
SYDE2-201ENST00000234668 EIF4A2Q14240 407 aaKnown RBP11.5□□□□□ -0.57
SYDE2-201ENST00000234668 RBM42Q9BTD8 480 aaKnown RBP11.5□□□□□ -0.57
SYDE2-201ENST00000234668 FAM135BQ49AJ0 1406 aa11.49□□□□□ -0.57
SYDE2-201ENST00000234668 ACEP12821 1306 aa11.49□□□□□ -0.57
SYDE2-201ENST00000234668 NCBP3Q53F19 620 aaKnown RBP11.49□□□□□ -0.57
SYDE2-201ENST00000234668 NECTIN2Q92692 538 aa11.49□□□□□ -0.57
SYDE2-201ENST00000234668 RBM33Q96EV2 1170 aaKnown RBP11.49□□□□□ -0.57
SYDE2-201ENST00000234668 CPS1P31327 1500 aa11.49□□□□□ -0.57
SYDE2-201ENST00000234668 CFAP44Q96MT7 982 aa11.48□□□□□ -0.57
SYDE2-201ENST00000234668 IFT57Q9NWB7 429 aa11.48□□□□□ -0.57
SYDE2-201ENST00000234668 ROBO2Q9HCK4 1378 aa11.47□□□□□ -0.57
SYDE2-201ENST00000234668 SMARCA5O60264 1052 aaPredicted RBP11.47□□□□□ -0.57
SYDE2-201ENST00000234668 ZNF853P0CG23 659 aa11.47□□□□□ -0.57
SYDE2-201ENST00000234668 OTUD7AQ8TE49 926 aaPredicted RBP11.47□□□□□ -0.57
SYDE2-201ENST00000234668 MAP2P11137 1827 aaKnown RBP11.47□□□□□ -0.57
SYDE2-201ENST00000234668 CLTCQ00610 1675 aaKnown RBP11.47□□□□□ -0.57
SYDE2-201ENST00000234668 CD2BP2O95400 341 aaKnown RBP11.46□□□□□ -0.57
SYDE2-201ENST00000234668 SLC4A10Q6U841 1118 aa11.46□□□□□ -0.57
SYDE2-201ENST00000234668 F6X3S4 739 aa11.46□□□□□ -0.57
SYDE2-201ENST00000234668 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.46□□□□□ -0.57
SYDE2-201ENST00000234668 LTV1Q96GA3 475 aaPredicted RBP11.46□□□□□ -0.57
SYDE2-201ENST00000234668 TTC21BQ7Z4L5 1316 aa11.46□□□□□ -0.58
SYDE2-201ENST00000234668 CPSF1Q10570 1443 aaKnown RBP11.46□□□□□ -0.58
SYDE2-201ENST00000234668 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.45□□□□□ -0.58
SYDE2-201ENST00000234668 MED14O60244 1454 aa11.45□□□□□ -0.58
SYDE2-201ENST00000234668 EDC4Q6P2E9 1401 aaKnown RBP11.45□□□□□ -0.58
SYDE2-201ENST00000234668 CALD1Q05682 793 aaKnown RBP11.44□□□□□ -0.58
SYDE2-201ENST00000234668 TBC1D9Q6ZT07 1266 aa11.44□□□□□ -0.58
SYDE2-201ENST00000234668 HSCBQ8IWL3 235 aa11.44□□□□□ -0.58
SYDE2-201ENST00000234668 SLC4A2P04920 1241 aa11.44□□□□□ -0.58
SYDE2-201ENST00000234668 G2E3Q7L622 706 aa11.44□□□□□ -0.58
SYDE2-201ENST00000234668 ANO8Q9HCE9 1232 aaPredicted RBP11.44□□□□□ -0.58
SYDE2-201ENST00000234668 C14orf37Q86TY3 774 aa11.44□□□□□ -0.58
SYDE2-201ENST00000234668 NGDNQ8NEJ9 315 aaKnown RBP11.44□□□□□ -0.58
SYDE2-201ENST00000234668 MEIS3Q99687 375 aa11.43□□□□□ -0.58
SYDE2-201ENST00000234668 ZNF692Q9BU19 519 aaPredicted RBP11.43□□□□□ -0.58
SYDE2-201ENST00000234668 ZBTB7CA1YPR0 619 aa11.43□□□□□ -0.58
SYDE2-201ENST00000234668 HDGFP51858 240 aaKnown RBP11.43□□□□□ -0.58
SYDE2-201ENST00000234668 AMOTL2Q9Y2J4 779 aa11.43□□□□□ -0.58
SYDE2-201ENST00000234668 HSP90AA1P07900 732 aaKnown RBP11.42□□□□□ -0.58
SYDE2-201ENST00000234668 HSP90AB1P08238 724 aaKnown RBP11.42□□□□□ -0.58
SYDE2-201ENST00000234668 MCM4P33991 863 aa11.42□□□□□ -0.58
SYDE2-201ENST00000234668 PPP6R1Q9UPN7 881 aa11.42□□□□□ -0.58
SYDE2-201ENST00000234668 ATP7BP35670 1465 aa11.42□□□□□ -0.58
SYDE2-201ENST00000234668 GSPT1P15170 499 aaKnown RBP11.42□□□□□ -0.58
SYDE2-201ENST00000234668 MTHFSDQ2M296 383 aaKnown RBP11.42□□□□□ -0.58
SYDE2-201ENST00000234668 TSHZ3Q63HK5 1081 aa11.42□□□□□ -0.58
SYDE2-201ENST00000234668 API5Q9BZZ5 524 aaKnown RBP11.42□□□□□ -0.58
SYDE2-201ENST00000234668 ABCC4O15439 1325 aa11.42□□□□□ -0.58
SYDE2-201ENST00000234668 TNRQ92752 1358 aa11.42□□□□□ -0.58
SYDE2-201ENST00000234668 LMOD3Q0VAK6 560 aa11.41□□□□□ -0.58
SYDE2-201ENST00000234668 ARHGAP45Q92619 1136 aa11.41□□□□□ -0.58
SYDE2-201ENST00000234668 GCC1Q96CN9 775 aa11.41□□□□□ -0.58
SYDE2-201ENST00000234668 AMPHP49418 695 aa11.41□□□□□ -0.58
SYDE2-201ENST00000234668 BMP2KLQ5H9B9 411 aa11.41□□□□□ -0.58
SYDE2-201ENST00000234668 KIF2CQ99661 725 aa11.41□□□□□ -0.58
SYDE2-201ENST00000234668 MAP3K19Q56UN5 1328 aa11.41□□□□□ -0.58
SYDE2-201ENST00000234668 CHMP5Q9NZZ3 219 aa11.41□□□□□ -0.58
SYDE2-201ENST00000234668 PLEKHM2Q8IWE5 1019 aa11.4□□□□□ -0.58
SYDE2-201ENST00000234668 USHBP1Q8N6Y0 703 aa11.4□□□□□ -0.58
SYDE2-201ENST00000234668 TSPYL4Q9UJ04 414 aa11.4□□□□□ -0.58
SYDE2-201ENST00000234668 DIP2BQ9P265 1576 aa11.4□□□□□ -0.58
SYDE2-201ENST00000234668 CHL1O00533 1208 aa11.4□□□□□ -0.58
SYDE2-201ENST00000234668 BRPF1P55201 1214 aaPredicted RBP11.4□□□□□ -0.58
SYDE2-201ENST00000234668 ZNF428Q96B54 188 aa11.4□□□□□ -0.58
SYDE2-201ENST00000234668 TMEM2Q9UHN6 1383 aa11.4□□□□□ -0.59
SYDE2-201ENST00000234668 KCNA4P22459 653 aa11.39□□□□□ -0.59
SYDE2-201ENST00000234668 NLRP6P59044 892 aa11.39□□□□□ -0.59
SYDE2-201ENST00000234668 KIF20BQ96Q89 1820 aa11.39□□□□□ -0.59
SYDE2-201ENST00000234668 PANK2Q9BZ23 570 aa11.39□□□□□ -0.59
SYDE2-201ENST00000234668 RIMBP3CA6NJZ7 1639 aa11.39□□□□□ -0.59
SYDE2-201ENST00000234668 RIMBP3BA6NNM3 1639 aa11.39□□□□□ -0.59
SYDE2-201ENST00000234668 RIMBP3Q9UFD9 1639 aa11.39□□□□□ -0.59
SYDE2-201ENST00000234668 TRAK2O60296 914 aa11.39□□□□□ -0.59
SYDE2-201ENST00000234668 RTF1Q92541 710 aaKnown RBP11.39□□□□□ -0.59
SYDE2-201ENST00000234668 AATKQ6ZMQ8 1374 aa11.39□□□□□ -0.59
SYDE2-201ENST00000234668 EYA1Q99502 592 aa11.38□□□□□ -0.59
SYDE2-201ENST00000234668 VIRMAQ69YN4 1812 aaKnown RBP11.38□□□□□ -0.59
SYDE2-201ENST00000234668 RBM25P49756 843 aaKnown RBP11.38□□□□□ -0.59
SYDE2-201ENST00000234668 DCTPP1Q9H773 170 aa11.38□□□□□ -0.59
SYDE2-201ENST00000234668 ANKRD26Q9UPS8 1709 aa11.37□□□□□ -0.59
SYDE2-201ENST00000234668 CEP85Q6P2H3 762 aa11.37□□□□□ -0.59
SYDE2-201ENST00000234668 EXOC6BQ9Y2D4 811 aa11.37□□□□□ -0.59
SYDE2-201ENST00000234668 CDK12Q9NYV4 1490 aaPredicted RBP11.37□□□□□ -0.59
SYDE2-201ENST00000234668 PTCH1Q13635 1447 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms