RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 GOLGA6L9A6NEM1 432 aa9.69□□□□□ -0.86
APOB-201ENST00000233242 TUBB4AP04350 444 aa9.69□□□□□ -0.86
APOB-201ENST00000233242 SLC26A8Q96RN1 970 aa9.69□□□□□ -0.86
APOB-201ENST00000233242 CDKL5O76039 1030 aa9.69□□□□□ -0.86
APOB-201ENST00000233242 SH2B1Q9NRF2 756 aaPredicted RBP9.69□□□□□ -0.86
APOB-201ENST00000233242 CCDC30Q5VVM6 783 aa9.69□□□□□ -0.86
APOB-201ENST00000233242 KRT222Q8N1A0 295 aa9.68□□□□□ -0.86
APOB-201ENST00000233242 IMMTQ16891 758 aaKnown RBP9.68□□□□□ -0.86
APOB-201ENST00000233242 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.68□□□□□ -0.86
APOB-201ENST00000233242 EPB41L2O43491 1005 aaKnown RBP9.68□□□□□ -0.86
APOB-201ENST00000233242 LUZP1Q86V48 1076 aa9.68□□□□□ -0.86
APOB-201ENST00000233242 JAKMIP3Q5VZ66 844 aa9.68□□□□□ -0.86
APOB-201ENST00000233242 CCDC83Q8IWF9 413 aa9.68□□□□□ -0.86
APOB-201ENST00000233242 BMS1Q14692 1282 aaKnown RBP9.68□□□□□ -0.86
APOB-201ENST00000233242 ERICH3Q5RHP9 1530 aa9.68□□□□□ -0.86
APOB-201ENST00000233242 CASKIN1Q8WXD9 1431 aa9.68□□□□□ -0.86
APOB-201ENST00000233242 CBX1P83916 185 aa9.68□□□□□ -0.86
APOB-201ENST00000233242 GTF2E1P29083 439 aaPredicted RBP9.68□□□□□ -0.86
APOB-201ENST00000233242 POLR3GO15318 223 aaPredicted RBP9.68□□□□□ -0.86
APOB-201ENST00000233242 PPP4R3BQ5MIZ7 849 aa9.68□□□□□ -0.86
APOB-201ENST00000233242 PLCD4Q9BRC7 762 aa9.68□□□□□ -0.86
APOB-201ENST00000233242 IVLP07476 585 aa9.67□□□□□ -0.86
APOB-201ENST00000233242 ANKRD50Q9ULJ7 1429 aa9.67□□□□□ -0.86
APOB-201ENST00000233242 SURF6O75683 361 aaKnown RBP9.67□□□□□ -0.86
APOB-201ENST00000233242 RBM33Q96EV2 1170 aaKnown RBP9.67□□□□□ -0.86
APOB-201ENST00000233242 GOLGA6L10A0A0M3HER8 536 aa9.67□□□□□ -0.86
APOB-201ENST00000233242 EIF2S2P20042 333 aaKnown RBP9.67□□□□□ -0.86
APOB-201ENST00000233242 ANO10Q9NW15 660 aa9.67□□□□□ -0.86
APOB-201ENST00000233242 XPCQ01831 940 aaPredicted RBP9.67□□□□□ -0.86
APOB-201ENST00000233242 TRIM22Q8IYM9 498 aa9.67□□□□□ -0.86
APOB-201ENST00000233242 CCDC43Q96MW1 224 aaKnown RBP9.67□□□□□ -0.86
APOB-201ENST00000233242 FOSBP53539 338 aa9.67□□□□□ -0.86
APOB-201ENST00000233242 KIF5CO60282 957 aa9.66□□□□□ -0.86
APOB-201ENST00000233242 TBC1D2BQ9UPU7 963 aa9.66□□□□□ -0.86
APOB-201ENST00000233242 TDRD9Q8NDG6 1382 aaKnown RBP9.66□□□□□ -0.86
APOB-201ENST00000233242 KLHL40Q2TBA0 621 aa9.66□□□□□ -0.86
APOB-201ENST00000233242 NOB1Q9ULX3 412 aaKnown RBP9.66□□□□□ -0.86
APOB-201ENST00000233242 LTV1Q96GA3 475 aaPredicted RBP9.66□□□□□ -0.86
APOB-201ENST00000233242 G3V3G9 751 aa9.66□□□□□ -0.86
APOB-201ENST00000233242 DCAF8Q5TAQ9 597 aa9.66□□□□□ -0.86
APOB-201ENST00000233242 CCDC9Q9Y3X0 531 aaKnown RBP9.66□□□□□ -0.86
APOB-201ENST00000233242 SEPT7Q16181 437 aaKnown RBP9.66□□□□□ -0.86
APOB-201ENST00000233242 TUBB4BP68371 445 aa9.65□□□□□ -0.86
APOB-201ENST00000233242 CCAR1Q8IX12 1150 aaKnown RBP9.65□□□□□ -0.86
APOB-201ENST00000233242 MTHFSP49914 203 aa9.65□□□□□ -0.86
APOB-201ENST00000233242 GAS2L2Q8NHY3 880 aa9.65□□□□□ -0.86
APOB-201ENST00000233242 ENOX2Q16206 610 aaKnown RBP9.65□□□□□ -0.86
APOB-201ENST00000233242 VPS37DQ86XT2 251 aa9.65□□□□□ -0.86
APOB-201ENST00000233242 TNPO1Q92973 898 aaKnown RBP9.65□□□□□ -0.86
APOB-201ENST00000233242 WASHC4Q2M389 1173 aa9.65□□□□□ -0.87
APOB-201ENST00000233242 BCL11BQ9C0K0 894 aaPredicted RBP9.65□□□□□ -0.87
APOB-201ENST00000233242 PDRG1Q9NUG6 133 aa9.65□□□□□ -0.87
APOB-201ENST00000233242 STK11IPQ8N1F8 1099 aa9.65□□□□□ -0.87
APOB-201ENST00000233242 CDK5RAP3Q96JB5 506 aa9.64□□□□□ -0.87
APOB-201ENST00000233242 TBC1D2Q9BYX2 928 aa9.64□□□□□ -0.87
APOB-201ENST00000233242 CENPHQ9H3R5 247 aa9.64□□□□□ -0.87
APOB-201ENST00000233242 TNNT1P13805 278 aa9.64□□□□□ -0.87
APOB-201ENST00000233242 CADPSQ9ULU8 1353 aa9.64□□□□□ -0.87
APOB-201ENST00000233242 SLC3A2P08195 630 aaKnown RBP9.64□□□□□ -0.87
APOB-201ENST00000233242 EXOSC9Q06265 439 aaKnown RBP9.64□□□□□ -0.87
APOB-201ENST00000233242 DDX19AQ9NUU7 478 aaKnown RBP9.64□□□□□ -0.87
APOB-201ENST00000233242 BLOC1S2Q6QNY1 142 aa9.64□□□□□ -0.87
APOB-201ENST00000233242 PRDM10Q9NQV6 1147 aa9.64□□□□□ -0.87
APOB-201ENST00000233242 CLIP2Q9UDT6 1046 aa9.64□□□□□ -0.87
APOB-201ENST00000233242 WASF1Q92558 559 aa9.64□□□□□ -0.87
APOB-201ENST00000233242 CCDC171Q6TFL3 1326 aa9.64□□□□□ -0.87
APOB-201ENST00000233242 CASQ1P31415 396 aa9.64□□□□□ -0.87
APOB-201ENST00000233242 TWISTNBQ3B726 338 aaPredicted RBP9.64□□□□□ -0.87
APOB-201ENST00000233242 RPAP2Q8IXW5 612 aaPredicted RBP9.64□□□□□ -0.87
APOB-201ENST00000233242 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.64□□□□□ -0.87
APOB-201ENST00000233242 TAF4BQ92750 862 aa9.64□□□□□ -0.87
APOB-201ENST00000233242 CCDC94Q9BW85 323 aaPredicted RBP9.64□□□□□ -0.87
APOB-201ENST00000233242 CTNNA3Q9UI47 895 aa9.64□□□□□ -0.87
APOB-201ENST00000233242 SRRTQ9BXP5 876 aaKnown RBP9.64□□□□□ -0.87
APOB-201ENST00000233242 LRRFIP2Q9Y608 721 aaKnown RBP9.64□□□□□ -0.87
APOB-201ENST00000233242 BRPF1P55201 1214 aaPredicted RBP9.63□□□□□ -0.87
APOB-201ENST00000233242 BCAR3O75815 825 aa9.63□□□□□ -0.87
APOB-201ENST00000233242 SYCP1Q15431 976 aa9.63□□□□□ -0.87
APOB-201ENST00000233242 ZNF397Q8NF99 534 aaPredicted RBP9.63□□□□□ -0.87
APOB-201ENST00000233242 TRIM34Q9BYJ4 488 aa9.63□□□□□ -0.87
APOB-201ENST00000233242 MLECQ14165 292 aa9.63□□□□□ -0.87
APOB-201ENST00000233242 KIAA1328Q86T90 577 aa9.63□□□□□ -0.87
APOB-201ENST00000233242 NOL7Q9UMY1 257 aaKnown RBP9.63□□□□□ -0.87
APOB-201ENST00000233242 GBP2P32456 591 aaPredicted RBP9.63□□□□□ -0.87
APOB-201ENST00000233242 FAM193AP78312 1265 aa9.63□□□□□ -0.87
APOB-201ENST00000233242 CFAP100Q494V2 611 aa9.63□□□□□ -0.87
APOB-201ENST00000233242 SLFN5Q08AF3 891 aa9.63□□□□□ -0.87
APOB-201ENST00000233242 NCOA2Q15596 1464 aa9.63□□□□□ -0.87
APOB-201ENST00000233242 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.63□□□□□ -0.87
APOB-201ENST00000233242 ZHX1Q9UKY1 873 aaPredicted RBP9.62□□□□□ -0.87
APOB-201ENST00000233242 CEP131Q9UPN4 1083 aa9.62□□□□□ -0.87
APOB-201ENST00000233242 WDR97A6NE52 1622 aa9.62□□□□□ -0.87
APOB-201ENST00000233242 NKTRP30414 1462 aaKnown RBP9.62□□□□□ -0.87
APOB-201ENST00000233242 CCDC150Q8NCX0 1101 aa9.62□□□□□ -0.87
APOB-201ENST00000233242 SMAP1Q8IYB5 467 aaPredicted RBP9.62□□□□□ -0.87
APOB-201ENST00000233242 RUSC2Q8N2Y8 1516 aa9.62□□□□□ -0.87
APOB-201ENST00000233242 MINK1Q8N4C8 1332 aaPredicted RBP9.62□□□□□ -0.87
APOB-201ENST00000233242 GTF2F1P35269 517 aaKnown RBP eCLIP9.62□□□□□ -0.871e-25■■■□□ 19
APOB-201ENST00000233242 NEUROD6Q96NK8 337 aa9.62□□□□□ -0.87
APOB-201ENST00000233242 NEFHP12036 1026 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms