RNA–Protein interactions for RNA: ENST00000231134.7

PCDHB5-201, Transcript of protocadherin beta 5, humanhuman

APPRIS P1 BASIC

Gene PCDHB5, Length 3,408 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB5-201ENST00000231134 GABPB1Q06547 395 aaPredicted RBP16.51■□□□□ 0.23
PCDHB5-201ENST00000231134 ST7Q9NRC1 585 aa16.51■□□□□ 0.23
PCDHB5-201ENST00000231134 URB2Q14146 1524 aaKnown RBP16.51■□□□□ 0.23
PCDHB5-201ENST00000231134 GSPT1P15170 499 aaKnown RBP16.51■□□□□ 0.23
PCDHB5-201ENST00000231134 CCDC27Q2M243 656 aa16.51■□□□□ 0.23
PCDHB5-201ENST00000231134 GIMAP6Q6P9H5 292 aa16.51■□□□□ 0.23
PCDHB5-201ENST00000231134 USP48Q86UV5 1035 aa16.51■□□□□ 0.23
PCDHB5-201ENST00000231134 ANKRD7Q92527 254 aa16.51■□□□□ 0.23
PCDHB5-201ENST00000231134 IQGAP2Q13576 1575 aa16.51■□□□□ 0.23
PCDHB5-201ENST00000231134 ABCC2Q92887 1545 aa16.5■□□□□ 0.23
PCDHB5-201ENST00000231134 INTS3Q68E01 1043 aaKnown RBP16.5■□□□□ 0.23
PCDHB5-201ENST00000231134 CCDC112Q8NEF3 446 aa16.5■□□□□ 0.23
PCDHB5-201ENST00000231134 CHMP4CQ96CF2 233 aa16.5■□□□□ 0.23
PCDHB5-201ENST00000231134 USP26Q9BXU7 913 aa16.5■□□□□ 0.23
PCDHB5-201ENST00000231134 TMX1Q9H3N1 280 aa16.5■□□□□ 0.23
PCDHB5-201ENST00000231134 FIBPO43427 364 aa16.5■□□□□ 0.23
PCDHB5-201ENST00000231134 PTGS1P23219 599 aa16.5■□□□□ 0.23
PCDHB5-201ENST00000231134 THUMPD2Q9BTF0 503 aaKnown RBP16.5■□□□□ 0.23
PCDHB5-201ENST00000231134 CLASP1Q7Z460 1538 aa16.5■□□□□ 0.23
PCDHB5-201ENST00000231134 SRPK2P78362 688 aaKnown RBP16.5■□□□□ 0.23
PCDHB5-201ENST00000231134 KIAA1524Q8TCG1 905 aa16.5■□□□□ 0.23
PCDHB5-201ENST00000231134 CTNNA3Q9UI47 895 aa16.5■□□□□ 0.23
PCDHB5-201ENST00000231134 TNNT1P13805 278 aa16.49■□□□□ 0.23
PCDHB5-201ENST00000231134 FAM184AQ8NB25 1140 aa16.49■□□□□ 0.23
PCDHB5-201ENST00000231134 GCC1Q96CN9 775 aa16.49■□□□□ 0.23
PCDHB5-201ENST00000231134 TMX3Q96JJ7 454 aa16.49■□□□□ 0.23
PCDHB5-201ENST00000231134 GOLGA6L6A8MZA4 724 aa16.49■□□□□ 0.23
PCDHB5-201ENST00000231134 TERF2Q15554 542 aa16.49■□□□□ 0.23
PCDHB5-201ENST00000231134 KRT222Q8N1A0 295 aa16.49■□□□□ 0.23
PCDHB5-201ENST00000231134 OTUD7AQ8TE49 926 aaPredicted RBP16.49■□□□□ 0.23
PCDHB5-201ENST00000231134 SPTLC3Q9NUV7 552 aa16.48■□□□□ 0.23
PCDHB5-201ENST00000231134 CALCOCO1Q9P1Z2 691 aa16.48■□□□□ 0.23
PCDHB5-201ENST00000231134 KDM5DQ9BY66 1539 aa16.48■□□□□ 0.23
PCDHB5-201ENST00000231134 KDM4AO75164 1064 aa16.48■□□□□ 0.23
PCDHB5-201ENST00000231134 TPD52L1Q16890 204 aaPredicted RBP16.47■□□□□ 0.23
PCDHB5-201ENST00000231134 ATAD2Q6PL18 1390 aa16.47■□□□□ 0.23
PCDHB5-201ENST00000231134 LRMPQ12912 555 aa16.47■□□□□ 0.23
PCDHB5-201ENST00000231134 UPF3BQ9BZI7 483 aaKnown RBP16.47■□□□□ 0.23
PCDHB5-201ENST00000231134 KCNF1Q9H3M0 494 aa16.47■□□□□ 0.23
PCDHB5-201ENST00000231134 TMEM132EQ6IEE7 984 aa16.46■□□□□ 0.23
PCDHB5-201ENST00000231134 DDX41Q9UJV9 622 aaKnown RBP16.46■□□□□ 0.23
PCDHB5-201ENST00000231134 LARP6Q9BRS8 491 aaKnown RBP16.45■□□□□ 0.22
PCDHB5-201ENST00000231134 UVSSAQ2YD98 709 aa16.45■□□□□ 0.22
PCDHB5-201ENST00000231134 CNPY2Q9Y2B0 182 aa16.45■□□□□ 0.22
PCDHB5-201ENST00000231134 CAPN2P17655 700 aa16.45■□□□□ 0.22
PCDHB5-201ENST00000231134 CCDC183Q5T5S1 534 aa16.45■□□□□ 0.22
PCDHB5-201ENST00000231134 TRPM1Q7Z4N2 1603 aa16.44■□□□□ 0.22
PCDHB5-201ENST00000231134 CCDC186Q7Z3E2 898 aa16.44■□□□□ 0.22
PCDHB5-201ENST00000231134 NSD3Q9BZ95 1437 aa16.44■□□□□ 0.22
PCDHB5-201ENST00000231134 PLEKHM2Q8IWE5 1019 aa16.44■□□□□ 0.22
PCDHB5-201ENST00000231134 GGNBP2Q9H3C7 697 aa16.44■□□□□ 0.22
PCDHB5-201ENST00000231134 REC8O95072 547 aa16.44■□□□□ 0.22
PCDHB5-201ENST00000231134 GTF3C6Q969F1 213 aa16.44■□□□□ 0.22
PCDHB5-201ENST00000231134 TSHZ3Q63HK5 1081 aa16.43■□□□□ 0.22
PCDHB5-201ENST00000231134 KIF18AQ8NI77 898 aa16.43■□□□□ 0.22
PCDHB5-201ENST00000231134 SDSP20132 328 aa16.43■□□□□ 0.22
PCDHB5-201ENST00000231134 PLA2R1Q13018 1463 aa16.42■□□□□ 0.22
PCDHB5-201ENST00000231134 CTIFO43310 598 aaKnown RBP16.42■□□□□ 0.22
PCDHB5-201ENST00000231134 BRD1O95696 1058 aa16.42■□□□□ 0.22
PCDHB5-201ENST00000231134 FBLN1P23142 703 aa16.42■□□□□ 0.22
PCDHB5-201ENST00000231134 TTC22Q5TAA0 569 aa16.42■□□□□ 0.22
PCDHB5-201ENST00000231134 POLR3AO14802 1390 aaPredicted RBP16.41■□□□□ 0.22
PCDHB5-201ENST00000231134 POLR3GO15318 223 aaPredicted RBP16.41■□□□□ 0.22
PCDHB5-201ENST00000231134 TMPOP42166 694 aaKnown RBP16.41■□□□□ 0.22
PCDHB5-201ENST00000231134 AP5Z1O43299 807 aa16.41■□□□□ 0.22
PCDHB5-201ENST00000231134 ANO2Q9NQ90 1003 aa16.41■□□□□ 0.22
PCDHB5-201ENST00000231134 PRDM15P57071 1507 aaPredicted RBP16.41■□□□□ 0.22
PCDHB5-201ENST00000231134 CEP170Q5SW79 1584 aa16.41■□□□□ 0.22
PCDHB5-201ENST00000231134 SIRT2Q8IXJ6 389 aa16.41■□□□□ 0.22
PCDHB5-201ENST00000231134 TRIM5Q9C035 493 aa16.41■□□□□ 0.22
PCDHB5-201ENST00000231134 PPIP5K1Q6PFW1 1433 aa16.4■□□□□ 0.22
PCDHB5-201ENST00000231134 CAMK4Q16566 473 aa16.4■□□□□ 0.22
PCDHB5-201ENST00000231134 ZBTB7BO15156 539 aaPredicted RBP16.4■□□□□ 0.22
PCDHB5-201ENST00000231134 HNRNPH2P55795 449 aaKnown RBP16.4■□□□□ 0.22
PCDHB5-201ENST00000231134 NOL10Q9BSC4 688 aaKnown RBP16.4■□□□□ 0.22
PCDHB5-201ENST00000231134 SMTNL1A8MU46 457 aa16.39■□□□□ 0.22
PCDHB5-201ENST00000231134 NRBP1Q9UHY1 535 aa16.39■□□□□ 0.22
PCDHB5-201ENST00000231134 SPAG9O60271 1321 aaKnown RBP16.39■□□□□ 0.21
PCDHB5-201ENST00000231134 MX1P20591 662 aa16.39■□□□□ 0.21
PCDHB5-201ENST00000231134 ELF2Q15723 593 aa16.39■□□□□ 0.21
PCDHB5-201ENST00000231134 ADGRL2O95490 1459 aa16.39■□□□□ 0.21
PCDHB5-201ENST00000231134 PHF23Q9BUL5 403 aaPredicted RBP16.39■□□□□ 0.21
PCDHB5-201ENST00000231134 TRMT1Q9NXH9 659 aaKnown RBP16.39■□□□□ 0.21
PCDHB5-201ENST00000231134 ERC2O15083 957 aa16.38■□□□□ 0.21
PCDHB5-201ENST00000231134 ZNF215Q9UL58 517 aaPredicted RBP16.38■□□□□ 0.21
PCDHB5-201ENST00000231134 HMOX1P09601 288 aa16.38■□□□□ 0.21
PCDHB5-201ENST00000231134 CT47B1P0C2W7 299 aaPredicted RBP16.38■□□□□ 0.21
PCDHB5-201ENST00000231134 KMT5BQ4FZB7 885 aa16.38■□□□□ 0.21
PCDHB5-201ENST00000231134 RSPH14Q9UHP6 348 aa16.38■□□□□ 0.21
PCDHB5-201ENST00000231134 MORC2Q9Y6X9 1032 aaPredicted RBP16.38■□□□□ 0.21
PCDHB5-201ENST00000231134 LUZP1Q86V48 1076 aa16.37■□□□□ 0.21
PCDHB5-201ENST00000231134 SECISBP2LQ93073 1101 aaKnown RBP16.37■□□□□ 0.21
PCDHB5-201ENST00000231134 RSPH4AQ5TD94 716 aa16.37■□□□□ 0.21
PCDHB5-201ENST00000231134 NEK11Q8NG66 645 aa16.37■□□□□ 0.21
PCDHB5-201ENST00000231134 RILPL2Q969X0 211 aa16.37■□□□□ 0.21
PCDHB5-201ENST00000231134 JPH4Q96JJ6 628 aa16.37■□□□□ 0.21
PCDHB5-201ENST00000231134 STK26Q9P289 416 aa16.37■□□□□ 0.21
PCDHB5-201ENST00000231134 ADGRF5Q8IZF2 1346 aa16.37■□□□□ 0.21
PCDHB5-201ENST00000231134 TPM3P06753 285 aa16.36■□□□□ 0.21
PCDHB5-201ENST00000231134 C10orf67Q8IYJ2 551 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms