RNA–Protein interactions for RNA: ENST00000229854.11

MCM3-201, Transcript of minichromosome maintenance complex component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MCM3, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM3-201ENST00000229854 DIP2BQ9P265 1576 aa12.75□□□□□ -0.37
MCM3-201ENST00000229854 DMTNQ08495 405 aa12.75□□□□□ -0.37
MCM3-201ENST00000229854 HDAC1Q13547 482 aaPredicted RBP12.75□□□□□ -0.37
MCM3-201ENST00000229854 CD163L1Q9NR16 1453 aa12.75□□□□□ -0.37
MCM3-201ENST00000229854 KIF2CQ99661 725 aa12.75□□□□□ -0.37
MCM3-201ENST00000229854 RIMBP3CA6NJZ7 1639 aa12.75□□□□□ -0.37
MCM3-201ENST00000229854 RIMBP3BA6NNM3 1639 aa12.75□□□□□ -0.37
MCM3-201ENST00000229854 RIMBP3Q9UFD9 1639 aa12.75□□□□□ -0.37
MCM3-201ENST00000229854 CBX1P83916 185 aa12.75□□□□□ -0.37
MCM3-201ENST00000229854 WDR63Q8IWG1 891 aa12.75□□□□□ -0.37
MCM3-201ENST00000229854 JARID2Q92833 1246 aaPredicted RBP12.75□□□□□ -0.37
MCM3-201ENST00000229854 IBTKQ9P2D0 1353 aaPredicted RBP12.75□□□□□ -0.37
MCM3-201ENST00000229854 PRPF40AO75400 957 aaKnown RBP12.74□□□□□ -0.37
MCM3-201ENST00000229854 RNF214Q8ND24 703 aa12.74□□□□□ -0.37
MCM3-201ENST00000229854 TSC1Q92574 1164 aa12.74□□□□□ -0.37
MCM3-201ENST00000229854 TSR2Q969E8 191 aaKnown RBP12.74□□□□□ -0.37
MCM3-201ENST00000229854 CCDC39Q9UFE4 941 aa12.74□□□□□ -0.37
MCM3-201ENST00000229854 DDX19BQ9UMR2 479 aa12.74□□□□□ -0.37
MCM3-201ENST00000229854 AGLP35573 1532 aa12.74□□□□□ -0.37
MCM3-201ENST00000229854 TRIM27P14373 513 aa12.74□□□□□ -0.37
MCM3-201ENST00000229854 GGT6Q6P531 493 aa12.73□□□□□ -0.37
MCM3-201ENST00000229854 PDLIM2Q96JY6 352 aa12.73□□□□□ -0.37
MCM3-201ENST00000229854 TRAK1Q9UPV9 953 aa12.73□□□□□ -0.37
MCM3-201ENST00000229854 MORC1Q86VD1 984 aa12.73□□□□□ -0.37
MCM3-201ENST00000229854 CDC42BPGQ6DT37 1551 aa12.73□□□□□ -0.37
MCM3-201ENST00000229854 ALKQ9UM73 1620 aa12.73□□□□□ -0.37
MCM3-201ENST00000229854 ABCC11Q96J66 1382 aa12.73□□□□□ -0.37
MCM3-201ENST00000229854 MPNDQ8N594 471 aa12.73□□□□□ -0.37
MCM3-201ENST00000229854 RAPGEF3O95398 923 aa12.72□□□□□ -0.37
MCM3-201ENST00000229854 ZSCAN20P17040 1043 aaPredicted RBP12.72□□□□□ -0.37
MCM3-201ENST00000229854 SLC12A5Q9H2X9 1139 aa12.72□□□□□ -0.37
MCM3-201ENST00000229854 UTP14CQ5TAP6 766 aaKnown RBP12.72□□□□□ -0.37
MCM3-201ENST00000229854 ANKRD45Q5TZF3 282 aa12.72□□□□□ -0.37
MCM3-201ENST00000229854 CHD1LQ86WJ1 897 aa12.72□□□□□ -0.37
MCM3-201ENST00000229854 LMBRD1Q9NUN5 540 aa12.72□□□□□ -0.37
MCM3-201ENST00000229854 DLC1Q96QB1 1528 aa12.72□□□□□ -0.37
MCM3-201ENST00000229854 SPATA31D1Q6ZQQ2 1576 aa12.71□□□□□ -0.37
MCM3-201ENST00000229854 SYCE3A1L190 88 aa12.71□□□□□ -0.37
MCM3-201ENST00000229854 MCM5P33992 734 aa12.71□□□□□ -0.37
MCM3-201ENST00000229854 NUCB1Q02818 461 aa12.71□□□□□ -0.37
MCM3-201ENST00000229854 TMEM132EQ6IEE7 984 aa12.71□□□□□ -0.37
MCM3-201ENST00000229854 VGFO15240 615 aaPredicted RBP12.71□□□□□ -0.38
MCM3-201ENST00000229854 CCDC27Q2M243 656 aa12.71□□□□□ -0.38
MCM3-201ENST00000229854 TMEM57Q8N5G2 664 aa12.71□□□□□ -0.38
MCM3-201ENST00000229854 BBXQ8WY36 941 aaPredicted RBP12.71□□□□□ -0.38
MCM3-201ENST00000229854 KIF16BQ96L93 1317 aa12.71□□□□□ -0.38
MCM3-201ENST00000229854 NUCB2P80303 420 aa12.7□□□□□ -0.38
MCM3-201ENST00000229854 EXOSC9Q06265 439 aaKnown RBP12.7□□□□□ -0.38
MCM3-201ENST00000229854 NOB1Q9ULX3 412 aaKnown RBP12.7□□□□□ -0.38
MCM3-201ENST00000229854 NRXN3Q9Y4C0 1643 aa12.7□□□□□ -0.38
MCM3-201ENST00000229854 PKP1Q13835 747 aa12.7□□□□□ -0.38
MCM3-201ENST00000229854 FOXD4L5Q5VV16 416 aaPredicted RBP12.7□□□□□ -0.38
MCM3-201ENST00000229854 TBC1D9Q6ZT07 1266 aa12.7□□□□□ -0.38
MCM3-201ENST00000229854 FOXD4L4Q8WXT5 416 aaPredicted RBP12.7□□□□□ -0.38
MCM3-201ENST00000229854 FAM177BA6PVY3 158 aa12.7□□□□□ -0.38
MCM3-201ENST00000229854 KIAA2012Q0VF49 1180 aa12.7□□□□□ -0.38
MCM3-201ENST00000229854 ATF7IPQ6VMQ6 1270 aa12.7□□□□□ -0.38
MCM3-201ENST00000229854 CLEC17AQ6ZS10 378 aa12.7□□□□□ -0.38
MCM3-201ENST00000229854 SSH1Q8WYL5 1049 aa12.7□□□□□ -0.38
MCM3-201ENST00000229854 SLC52A1Q9NWF4 448 aa12.7□□□□□ -0.38
MCM3-201ENST00000229854 EVC2Q86UK5 1308 aa12.7□□□□□ -0.38
MCM3-201ENST00000229854 ARHGEF40Q8TER5 1519 aa12.69□□□□□ -0.38
MCM3-201ENST00000229854 IDI1Q13907 227 aa12.69□□□□□ -0.38
MCM3-201ENST00000229854 BMP2KLQ5H9B9 411 aa12.69□□□□□ -0.38
MCM3-201ENST00000229854 KNDC1Q76NI1 1749 aa12.69□□□□□ -0.38
MCM3-201ENST00000229854 A0A1W2PP64 1363 aa12.68□□□□□ -0.38
MCM3-201ENST00000229854 U2AF1L5P0DN76 240 aaPredicted RBP12.68□□□□□ -0.38
MCM3-201ENST00000229854 U2AF1Q01081 240 aaKnown RBP eCLIP12.68□□□□□ -0.38
MCM3-201ENST00000229854 PDE4CQ08493 712 aa12.68□□□□□ -0.38
MCM3-201ENST00000229854 CHAMP1Q96JM3 812 aa12.68□□□□□ -0.38
MCM3-201ENST00000229854 PPP4R3BQ5MIZ7 849 aa12.68□□□□□ -0.38
MCM3-201ENST00000229854 GPT2Q8TD30 523 aa12.68□□□□□ -0.38
MCM3-201ENST00000229854 YTHDC2Q9H6S0 1430 aaKnown RBP12.68□□□□□ -0.38
MCM3-201ENST00000229854 MYRIPQ8NFW9 859 aa12.68□□□□□ -0.38
MCM3-201ENST00000229854 CHGAP10645 457 aaKnown RBP12.67□□□□□ -0.38
MCM3-201ENST00000229854 LRSAM1Q6UWE0 723 aa12.67□□□□□ -0.38
MCM3-201ENST00000229854 ZBTB40Q9NUA8 1239 aa12.67□□□□□ -0.38
MCM3-201ENST00000229854 TMEM63CQ9P1W3 806 aa12.67□□□□□ -0.38
MCM3-201ENST00000229854 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.67□□□□□ -0.38
MCM3-201ENST00000229854 MTHFSP49914 203 aa12.66□□□□□ -0.38
MCM3-201ENST00000229854 CFAP53Q96M91 514 aa12.66□□□□□ -0.38
MCM3-201ENST00000229854 ZNF830Q96NB3 372 aaPredicted RBP12.66□□□□□ -0.38
MCM3-201ENST00000229854 SPDYE4A6NLX3 237 aa12.66□□□□□ -0.38
MCM3-201ENST00000229854 IGSF3O75054 1194 aa12.65□□□□□ -0.38
MCM3-201ENST00000229854 GTPBP4Q9BZE4 634 aaKnown RBP12.65□□□□□ -0.38
MCM3-201ENST00000229854 C1orf115Q9H7X2 142 aa12.65□□□□□ -0.38
MCM3-201ENST00000229854 ZNF710Q8N1W2 664 aa12.65□□□□□ -0.38
MCM3-201ENST00000229854 ATP2B3Q16720 1220 aa12.64□□□□□ -0.39
MCM3-201ENST00000229854 ZGPATQ8N5A5 531 aaKnown RBP12.64□□□□□ -0.39
MCM3-201ENST00000229854 NSFL1CQ9UNZ2 370 aaKnown RBP12.64□□□□□ -0.39
MCM3-201ENST00000229854 PNPLA6Q8IY17 1366 aa12.64□□□□□ -0.39
MCM3-201ENST00000229854 AK9Q5TCS8 1911 aa12.64□□□□□ -0.39
MCM3-201ENST00000229854 RABEP1Q15276 862 aa12.64□□□□□ -0.39
MCM3-201ENST00000229854 ATAD2Q6PL18 1390 aa12.64□□□□□ -0.39
MCM3-201ENST00000229854 MON2Q7Z3U7 1717 aa12.64□□□□□ -0.39
MCM3-201ENST00000229854 A2ML1A8K2U0 1454 aa12.63□□□□□ -0.39
MCM3-201ENST00000229854 CDC45O75419 566 aa12.63□□□□□ -0.39
MCM3-201ENST00000229854 C17orf53Q8N3J3 647 aaPredicted RBP12.63□□□□□ -0.39
MCM3-201ENST00000229854 IPO8O15397 1037 aaKnown RBP12.63□□□□□ -0.39
MCM3-201ENST00000229854 TSPOAP1O95153 1857 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms