RNA–Protein interactions for RNA: ENST00000229307.8

NANOG-201, Transcript of Nanog homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NANOG, Length 5,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOG-201ENST00000229307 BCL2L13Q9BXK5 485 aa9.87□□□□□ -0.83
NANOG-201ENST00000229307 TOMM22Q9NS69 142 aa9.87□□□□□ -0.83
NANOG-201ENST00000229307 ZC3H13Q5T200 1668 aaKnown RBP9.87□□□□□ -0.83
NANOG-201ENST00000229307 HDGFL1Q5TGJ6 251 aa9.86□□□□□ -0.83
NANOG-201ENST00000229307 ADAMTS8Q9UP79 889 aa9.86□□□□□ -0.83
NANOG-201ENST00000229307 CT47B1P0C2W7 299 aaPredicted RBP9.86□□□□□ -0.83
NANOG-201ENST00000229307 RUFY2Q8WXA3 655 aa9.86□□□□□ -0.83
NANOG-201ENST00000229307 IQSEC2Q5JU85 1478 aa9.86□□□□□ -0.83
NANOG-201ENST00000229307 GOLGA6L4A6NEF3 574 aa9.86□□□□□ -0.83
NANOG-201ENST00000229307 CTDP1Q9Y5B0 961 aaPredicted RBP9.86□□□□□ -0.83
NANOG-201ENST00000229307 TEX13AQ9BXU3 409 aaPredicted RBP9.85□□□□□ -0.83
NANOG-201ENST00000229307 TWISTNBQ3B726 338 aaPredicted RBP9.85□□□□□ -0.83
NANOG-201ENST00000229307 WDR63Q8IWG1 891 aa9.85□□□□□ -0.83
NANOG-201ENST00000229307 ZPR1O75312 459 aa9.85□□□□□ -0.83
NANOG-201ENST00000229307 PPIP5K1Q6PFW1 1433 aa9.84□□□□□ -0.83
NANOG-201ENST00000229307 ANKRD36BQ8N2N9 1353 aa9.84□□□□□ -0.83
NANOG-201ENST00000229307 HTATSF1O43719 755 aaKnown RBP9.84□□□□□ -0.83
NANOG-201ENST00000229307 NFE2L2Q16236 605 aa9.84□□□□□ -0.83
NANOG-201ENST00000229307 C8orf37Q96NL8 207 aa9.84□□□□□ -0.83
NANOG-201ENST00000229307 PIK3R4Q99570 1358 aa9.84□□□□□ -0.83
NANOG-201ENST00000229307 PLEKHG1Q9ULL1 1385 aa9.84□□□□□ -0.83
NANOG-201ENST00000229307 ERC2O15083 957 aa9.84□□□□□ -0.83
NANOG-201ENST00000229307 GNL3LQ9NVN8 582 aaKnown RBP9.84□□□□□ -0.83
NANOG-201ENST00000229307 KIF3AQ9Y496 699 aa9.84□□□□□ -0.83
NANOG-201ENST00000229307 IFNL2Q8IZJ0 200 aa9.84□□□□□ -0.83
NANOG-201ENST00000229307 ANKRD24Q8TF21 1146 aa9.83□□□□□ -0.84
NANOG-201ENST00000229307 SLAIN2Q9P270 581 aa9.83□□□□□ -0.84
NANOG-201ENST00000229307 TMEM94Q12767 1356 aa9.83□□□□□ -0.84
NANOG-201ENST00000229307 DIAPH3Q9NSV4 1193 aa9.83□□□□□ -0.84
NANOG-201ENST00000229307 LTKP29376 864 aa9.83□□□□□ -0.84
NANOG-201ENST00000229307 CDCA7Q9BWT1 371 aaPredicted RBP9.83□□□□□ -0.84
NANOG-201ENST00000229307 C3P01024 1663 aa9.83□□□□□ -0.84
NANOG-201ENST00000229307 TULP1O00294 542 aaPredicted RBP9.82□□□□□ -0.84
NANOG-201ENST00000229307 TCERG1O14776 1098 aaKnown RBP9.82□□□□□ -0.84
NANOG-201ENST00000229307 ANKRD45Q5TZF3 282 aa9.82□□□□□ -0.84
NANOG-201ENST00000229307 ZNF772Q68DY9 489 aaPredicted RBP9.82□□□□□ -0.84
NANOG-201ENST00000229307 ZNF428Q96B54 188 aa9.82□□□□□ -0.84
NANOG-201ENST00000229307 YTHDC2Q9H6S0 1430 aaKnown RBP9.82□□□□□ -0.84
NANOG-201ENST00000229307 A0A087WZG4 1122 aa9.82□□□□□ -0.84
NANOG-201ENST00000229307 FAM177BA6PVY3 158 aa9.82□□□□□ -0.84
NANOG-201ENST00000229307 ERC1Q8IUD2 1116 aa9.82□□□□□ -0.84
NANOG-201ENST00000229307 HSP90AB3PQ58FF7 597 aa9.82□□□□□ -0.84
NANOG-201ENST00000229307 SYNE3Q6ZMZ3 975 aa9.82□□□□□ -0.84
NANOG-201ENST00000229307 CCT4P50991 539 aaKnown RBP9.82□□□□□ -0.84
NANOG-201ENST00000229307 RRP1P56182 461 aaKnown RBP9.82□□□□□ -0.84
NANOG-201ENST00000229307 CENPQQ7L2Z9 268 aaPredicted RBP9.81□□□□□ -0.84
NANOG-201ENST00000229307 SMARCC1Q92922 1105 aaPredicted RBP9.81□□□□□ -0.84
NANOG-201ENST00000229307 CCDC34Q96HJ3 373 aa9.81□□□□□ -0.84
NANOG-201ENST00000229307 RALGAPBQ86X10 1494 aa9.81□□□□□ -0.84
NANOG-201ENST00000229307 HSPA1LP34931 641 aa9.81□□□□□ -0.84
NANOG-201ENST00000229307 RILPL2Q969X0 211 aa9.81□□□□□ -0.84
NANOG-201ENST00000229307 PRAG1Q86YV5 1406 aa9.81□□□□□ -0.84
NANOG-201ENST00000229307 AK7Q96M32 723 aa9.8□□□□□ -0.84
NANOG-201ENST00000229307 CWC22Q9HCG8 908 aaKnown RBP9.8□□□□□ -0.84
NANOG-201ENST00000229307 CNNM1Q9NRU3 951 aa9.8□□□□□ -0.84
NANOG-201ENST00000229307 COG6Q9Y2V7 657 aa9.8□□□□□ -0.84
NANOG-201ENST00000229307 ABCC11Q96J66 1382 aa9.8□□□□□ -0.84
NANOG-201ENST00000229307 LRRIQ1Q96JM4 1722 aa9.8□□□□□ -0.84
NANOG-201ENST00000229307 ARHGEF10O15013 1369 aa9.8□□□□□ -0.84
NANOG-201ENST00000229307 TAF7Q15545 349 aaPredicted RBP9.8□□□□□ -0.84
NANOG-201ENST00000229307 TBC1D2BQ9UPU7 963 aa9.8□□□□□ -0.84
NANOG-201ENST00000229307 NEUROD6Q96NK8 337 aa9.8□□□□□ -0.84
NANOG-201ENST00000229307 MFAP1P55081 439 aaKnown RBP9.8□□□□□ -0.84
NANOG-201ENST00000229307 MPRIPQ6WCQ1 1025 aa9.8□□□□□ -0.84
NANOG-201ENST00000229307 SRCIN1Q9C0H9 1055 aa9.79□□□□□ -0.84
NANOG-201ENST00000229307 BCL11BQ9C0K0 894 aaPredicted RBP9.79□□□□□ -0.84
NANOG-201ENST00000229307 MYO3AQ8NEV4 1616 aa9.79□□□□□ -0.84
NANOG-201ENST00000229307 SLC4A2P04920 1241 aa9.79□□□□□ -0.84
NANOG-201ENST00000229307 AKAP17AQ02040 695 aaKnown RBP9.79□□□□□ -0.84
NANOG-201ENST00000229307 EXOSC9Q06265 439 aaKnown RBP9.79□□□□□ -0.84
NANOG-201ENST00000229307 DDB1Q16531 1140 aa9.79□□□□□ -0.84
NANOG-201ENST00000229307 FMNL2Q96PY5 1086 aa9.79□□□□□ -0.84
NANOG-201ENST00000229307 NBPF14Q5TI25 921 aa9.79□□□□□ -0.84
NANOG-201ENST00000229307 SIRT1Q96EB6 747 aa9.79□□□□□ -0.84
NANOG-201ENST00000229307 APPP05067 770 aa9.79□□□□□ -0.84
NANOG-201ENST00000229307 MYL6BP14649 208 aa9.79□□□□□ -0.84
NANOG-201ENST00000229307 CHRNA2Q15822 529 aa9.79□□□□□ -0.84
NANOG-201ENST00000229307 ZCRB1Q8TBF4 217 aaKnown RBP9.79□□□□□ -0.84
NANOG-201ENST00000229307 PRDM15P57071 1507 aaPredicted RBP9.78□□□□□ -0.84
NANOG-201ENST00000229307 TRDNQ13061 729 aa9.78□□□□□ -0.84
NANOG-201ENST00000229307 MPHOSPH8Q99549 860 aa9.78□□□□□ -0.84
NANOG-201ENST00000229307 EMILIN1Q9Y6C2 1016 aa9.78□□□□□ -0.84
NANOG-201ENST00000229307 LMTK2Q8IWU2 1503 aa9.78□□□□□ -0.84
NANOG-201ENST00000229307 GOLGA6L6A8MZA4 724 aa9.78□□□□□ -0.84
NANOG-201ENST00000229307 CPLX2Q6PUV4 134 aaKnown RBP9.78□□□□□ -0.84
NANOG-201ENST00000229307 C11orf95C9JLR9 678 aaPredicted RBP9.78□□□□□ -0.84
NANOG-201ENST00000229307 RNF17Q9BXT8 1623 aaKnown RBP9.78□□□□□ -0.84
NANOG-201ENST00000229307 PLIN1O60240 522 aa9.77□□□□□ -0.84
NANOG-201ENST00000229307 GNAI2P04899 355 aa9.77□□□□□ -0.84
NANOG-201ENST00000229307 CCDC57Q2TAC2 916 aa9.77□□□□□ -0.84
NANOG-201ENST00000229307 RNF20Q5VTR2 975 aa9.77□□□□□ -0.84
NANOG-201ENST00000229307 CLASRPQ8N2M8 674 aaKnown RBP9.77□□□□□ -0.84
NANOG-201ENST00000229307 USHBP1Q8N6Y0 703 aa9.77□□□□□ -0.84
NANOG-201ENST00000229307 SPATA31D1Q6ZQQ2 1576 aa9.77□□□□□ -0.84
NANOG-201ENST00000229307 IFT57Q9NWB7 429 aa9.77□□□□□ -0.85
NANOG-201ENST00000229307 IGHMBP2P38935 993 aaKnown RBP9.77□□□□□ -0.85
NANOG-201ENST00000229307 TMPOP42166 694 aaKnown RBP9.77□□□□□ -0.85
NANOG-201ENST00000229307 IL2RBP14784 551 aa9.77□□□□□ -0.85
NANOG-201ENST00000229307 ZKSCAN1P17029 563 aaPredicted RBP9.77□□□□□ -0.85
NANOG-201ENST00000229307 CCDC158Q5M9N0 1113 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms