RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 GIMAP6Q6P9H5 292 aa17.56■□□□□ 0.4
PRDM4-201ENST00000228437 TRIM5Q9C035 493 aa17.56■□□□□ 0.4
PRDM4-201ENST00000228437 MAGI1Q96QZ7 1491 aaPredicted RBP17.56■□□□□ 0.4
PRDM4-201ENST00000228437 LAMC3Q9Y6N6 1575 aa17.56■□□□□ 0.4
PRDM4-201ENST00000228437 MIS18AQ9NYP9 233 aa17.56■□□□□ 0.4
PRDM4-201ENST00000228437 FERMT3Q86UX7 667 aa17.55■□□□□ 0.4
PRDM4-201ENST00000228437 ZNF445P59923 1031 aa17.55■□□□□ 0.4
PRDM4-201ENST00000228437 IL1RAPL2Q9NP60 686 aa17.55■□□□□ 0.4
PRDM4-201ENST00000228437 CCDC141Q6ZP82 1450 aa17.54■□□□□ 0.4
PRDM4-201ENST00000228437 TPD52L1Q16890 204 aaPredicted RBP17.54■□□□□ 0.4
PRDM4-201ENST00000228437 U2AF2P26368 475 aaKnown RBP eCLIP17.54■□□□□ 0.4
PRDM4-201ENST00000228437 RTF1Q92541 710 aaKnown RBP17.54■□□□□ 0.4
PRDM4-201ENST00000228437 TTC22Q5TAA0 569 aa17.54■□□□□ 0.4
PRDM4-201ENST00000228437 C14orf37Q86TY3 774 aa17.54■□□□□ 0.4
PRDM4-201ENST00000228437 SMAP1Q8IYB5 467 aaPredicted RBP17.54■□□□□ 0.4
PRDM4-201ENST00000228437 GADD45BO75293 160 aaPredicted RBP17.53■□□□□ 0.4
PRDM4-201ENST00000228437 F6X3S4 739 aa17.53■□□□□ 0.4
PRDM4-201ENST00000228437 CYB5RLQ6IPT4 315 aa17.53■□□□□ 0.4
PRDM4-201ENST00000228437 POLR3AO14802 1390 aaPredicted RBP17.53■□□□□ 0.4
PRDM4-201ENST00000228437 TNNT3P45378 269 aaPredicted RBP17.53■□□□□ 0.4
PRDM4-201ENST00000228437 PLEKHM2Q8IWE5 1019 aa17.53■□□□□ 0.4
PRDM4-201ENST00000228437 KRT24Q2M2I5 525 aa17.52■□□□□ 0.4
PRDM4-201ENST00000228437 STK31Q9BXU1 1019 aa17.52■□□□□ 0.4
PRDM4-201ENST00000228437 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.52■□□□□ 0.4
PRDM4-201ENST00000228437 V9GYY5 206 aaPredicted RBP17.52■□□□□ 0.4
PRDM4-201ENST00000228437 ZNF608Q9ULD9 1512 aaPredicted RBP17.52■□□□□ 0.4
PRDM4-201ENST00000228437 SCAPERQ9BY12 1400 aa17.52■□□□□ 0.39
PRDM4-201ENST00000228437 USP48Q86UV5 1035 aa17.52■□□□□ 0.39
PRDM4-201ENST00000228437 VGLL3A8MV65 326 aa17.52■□□□□ 0.39
PRDM4-201ENST00000228437 SLC4A2P04920 1241 aa17.52■□□□□ 0.39
PRDM4-201ENST00000228437 USP26Q9BXU7 913 aa17.52■□□□□ 0.39
PRDM4-201ENST00000228437 WDR7Q9Y4E6 1490 aa17.51■□□□□ 0.39
PRDM4-201ENST00000228437 BICD2Q8TD16 824 aa17.51■□□□□ 0.39
PRDM4-201ENST00000228437 CABP1Q9NZU7 370 aa17.51■□□□□ 0.39
PRDM4-201ENST00000228437 FKBP5Q13451 457 aaPredicted RBP17.51■□□□□ 0.39
PRDM4-201ENST00000228437 TRIM35Q9UPQ4 493 aa17.51■□□□□ 0.39
PRDM4-201ENST00000228437 CNPY2Q9Y2B0 182 aa17.51■□□□□ 0.39
PRDM4-201ENST00000228437 KIF21AQ7Z4S6 1674 aa17.51■□□□□ 0.39
PRDM4-201ENST00000228437 ZBTB7BO15156 539 aaPredicted RBP17.51■□□□□ 0.39
PRDM4-201ENST00000228437 GSPT1P15170 499 aaKnown RBP17.51■□□□□ 0.39
PRDM4-201ENST00000228437 ZNF500O60304 480 aaPredicted RBP17.5■□□□□ 0.39
PRDM4-201ENST00000228437 MCM5P33992 734 aa17.5■□□□□ 0.39
PRDM4-201ENST00000228437 CEBPZQ03701 1054 aaKnown RBP17.5■□□□□ 0.39
PRDM4-201ENST00000228437 HS1BP3Q53T59 392 aa17.5■□□□□ 0.39
PRDM4-201ENST00000228437 CKAP2LQ8IYA6 745 aa17.5■□□□□ 0.39
PRDM4-201ENST00000228437 LRRIQ1Q96JM4 1722 aa17.49■□□□□ 0.39
PRDM4-201ENST00000228437 RRS1Q15050 365 aaKnown RBP17.49■□□□□ 0.39
PRDM4-201ENST00000228437 C8orf58Q8NAV2 365 aa17.49■□□□□ 0.39
PRDM4-201ENST00000228437 WDR33Q9C0J8 1336 aaKnown RBP17.49■□□□□ 0.39
PRDM4-201ENST00000228437 GOLGA6L19H0YKK7 550 aa17.48■□□□□ 0.39
PRDM4-201ENST00000228437 GORABQ5T7V8 394 aa17.48■□□□□ 0.39
PRDM4-201ENST00000228437 ATP6V1DQ9Y5K8 247 aa17.48■□□□□ 0.39
PRDM4-201ENST00000228437 CCDC9Q9Y3X0 531 aaKnown RBP17.48■□□□□ 0.39
PRDM4-201ENST00000228437 ZBTB9Q96C00 473 aa17.48■□□□□ 0.39
PRDM4-201ENST00000228437 BECN2A8MW95 431 aa17.48■□□□□ 0.39
PRDM4-201ENST00000228437 KIF2CQ99661 725 aa17.48■□□□□ 0.39
PRDM4-201ENST00000228437 MEIS3Q99687 375 aa17.48■□□□□ 0.39
PRDM4-201ENST00000228437 LMOD3Q0VAK6 560 aa17.47■□□□□ 0.39
PRDM4-201ENST00000228437 ALDH1L2Q3SY69 923 aa17.47■□□□□ 0.39
PRDM4-201ENST00000228437 MBIPQ9NS73 344 aa17.47■□□□□ 0.39
PRDM4-201ENST00000228437 PLCD3Q8N3E9 789 aa17.47■□□□□ 0.39
PRDM4-201ENST00000228437 PHACTR3Q96KR7 559 aa17.47■□□□□ 0.39
PRDM4-201ENST00000228437 PRAM1Q96QH2 718 aa17.47■□□□□ 0.39
PRDM4-201ENST00000228437 MLECQ14165 292 aa17.47■□□□□ 0.39
PRDM4-201ENST00000228437 NUTM1Q86Y26 1132 aa17.47■□□□□ 0.39
PRDM4-201ENST00000228437 CCDC112Q8NEF3 446 aa17.47■□□□□ 0.39
PRDM4-201ENST00000228437 EMILIN1Q9Y6C2 1016 aa17.46■□□□□ 0.39
PRDM4-201ENST00000228437 FILIP1Q7Z7B0 1213 aa17.46■□□□□ 0.39
PRDM4-201ENST00000228437 MYRIPQ8NFW9 859 aa17.46■□□□□ 0.39
PRDM4-201ENST00000228437 STAC3Q96MF2 364 aa17.46■□□□□ 0.39
PRDM4-201ENST00000228437 MCM10Q7L590 875 aa17.46■□□□□ 0.39
PRDM4-201ENST00000228437 CCDC83Q8IWF9 413 aa17.45■□□□□ 0.38
PRDM4-201ENST00000228437 HAP1P54257 671 aaPredicted RBP17.45■□□□□ 0.38
PRDM4-201ENST00000228437 CCDC183Q5T5S1 534 aa17.45■□□□□ 0.38
PRDM4-201ENST00000228437 LTV1Q96GA3 475 aaPredicted RBP17.45■□□□□ 0.38
PRDM4-201ENST00000228437 PRIMPOLQ96LW4 560 aa17.45■□□□□ 0.38
PRDM4-201ENST00000228437 ESF1Q9H501 851 aaKnown RBP17.45■□□□□ 0.38
PRDM4-201ENST00000228437 BCL2L12Q9HB09 334 aa17.45■□□□□ 0.38
PRDM4-201ENST00000228437 RAPGEF6Q8TEU7 1601 aa17.45■□□□□ 0.38
PRDM4-201ENST00000228437 RIOK3O14730 519 aaKnown RBP17.45■□□□□ 0.38
PRDM4-201ENST00000228437 VAMP4O75379 141 aa17.45■□□□□ 0.38
PRDM4-201ENST00000228437 HSP90B1P14625 803 aaKnown RBP17.45■□□□□ 0.38
PRDM4-201ENST00000228437 MRPL50Q8N5N7 158 aaKnown RBP17.45■□□□□ 0.38
PRDM4-201ENST00000228437 TRMT1Q9NXH9 659 aaKnown RBP17.45■□□□□ 0.38
PRDM4-201ENST00000228437 STK3Q13188 491 aa17.44■□□□□ 0.38
PRDM4-201ENST00000228437 NFE2L2Q16236 605 aa17.44■□□□□ 0.38
PRDM4-201ENST00000228437 MRC2Q9UBG0 1479 aa17.44■□□□□ 0.38
PRDM4-201ENST00000228437 VGFO15240 615 aaPredicted RBP17.44■□□□□ 0.38
PRDM4-201ENST00000228437 EIF2S2P20042 333 aaKnown RBP17.44■□□□□ 0.38
PRDM4-201ENST00000228437 CCAR2Q8N163 923 aaKnown RBP17.44■□□□□ 0.38
PRDM4-201ENST00000228437 ADGRL2O95490 1459 aa17.44■□□□□ 0.38
PRDM4-201ENST00000228437 MCM2P49736 904 aa17.44■□□□□ 0.38
PRDM4-201ENST00000228437 SURF6O75683 361 aaKnown RBP17.43■□□□□ 0.38
PRDM4-201ENST00000228437 CWC27Q6UX04 472 aaKnown RBP17.43■□□□□ 0.38
PRDM4-201ENST00000228437 FAM184AQ8NB25 1140 aa17.43■□□□□ 0.38
PRDM4-201ENST00000228437 CCDC192P0DO97 292 aa17.43■□□□□ 0.38
PRDM4-201ENST00000228437 TNNT1P13805 278 aa17.43■□□□□ 0.38
PRDM4-201ENST00000228437 TERF1P54274 439 aa17.43■□□□□ 0.38
PRDM4-201ENST00000228437 FMNL2Q96PY5 1086 aa17.43■□□□□ 0.38
PRDM4-201ENST00000228437 SYNJ2O15056 1496 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms