RNA–Protein interactions for RNA: ENST00000227348.8

CRTAM-201, Transcript of cytotoxic and regulatory T cell molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRTAM, Length 2,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTAM-201ENST00000227348 TTC21BQ7Z4L5 1316 aa11.73□□□□□ -0.53
CRTAM-201ENST00000227348 USP54Q70EL1 1684 aa11.72□□□□□ -0.53
CRTAM-201ENST00000227348 OVOS2A0A0J9YW53 1432 aa11.72□□□□□ -0.53
CRTAM-201ENST00000227348 OVOS2Q6IE36 1432 aa11.72□□□□□ -0.53
CRTAM-201ENST00000227348 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.71□□□□□ -0.53
CRTAM-201ENST00000227348 PROSER2Q86WR7 435 aaPredicted RBP11.71□□□□□ -0.53
CRTAM-201ENST00000227348 WDR43Q15061 677 aaKnown RBP eCLIP11.71□□□□□ -0.53
CRTAM-201ENST00000227348 TMEM94Q12767 1356 aa11.7□□□□□ -0.54
CRTAM-201ENST00000227348 RNF25Q96BH1 459 aaPredicted RBP11.7□□□□□ -0.54
CRTAM-201ENST00000227348 SMG6Q86US8 1419 aaKnown RBP11.7□□□□□ -0.54
CRTAM-201ENST00000227348 IRX6P78412 446 aaPredicted RBP11.69□□□□□ -0.54
CRTAM-201ENST00000227348 NKX1-1Q15270 411 aaPredicted RBP11.69□□□□□ -0.54
CRTAM-201ENST00000227348 NGDNQ8NEJ9 315 aaKnown RBP11.69□□□□□ -0.54
CRTAM-201ENST00000227348 PNPLA6Q8IY17 1366 aa11.69□□□□□ -0.54
CRTAM-201ENST00000227348 PEAK1Q9H792 1746 aa11.69□□□□□ -0.54
CRTAM-201ENST00000227348 POLKQ9UBT6 870 aa11.69□□□□□ -0.54
CRTAM-201ENST00000227348 AATKQ6ZMQ8 1374 aa11.68□□□□□ -0.54
CRTAM-201ENST00000227348 CCDC146Q8IYE0 955 aa11.68□□□□□ -0.54
CRTAM-201ENST00000227348 COG3Q96JB2 828 aa11.68□□□□□ -0.54
CRTAM-201ENST00000227348 PHF8Q9UPP1 1060 aa11.68□□□□□ -0.54
CRTAM-201ENST00000227348 TRPM3Q9HCF6 1732 aaPredicted RBP11.67□□□□□ -0.54
CRTAM-201ENST00000227348 RSPH6AQ9H0K4 717 aa11.67□□□□□ -0.54
CRTAM-201ENST00000227348 KIF1AQ12756 1690 aa11.67□□□□□ -0.54
CRTAM-201ENST00000227348 TTC21AQ8NDW8 1320 aa11.67□□□□□ -0.54
CRTAM-201ENST00000227348 ORAI2Q96SN7 254 aa11.67□□□□□ -0.54
CRTAM-201ENST00000227348 EMILIN1Q9Y6C2 1016 aa11.67□□□□□ -0.54
CRTAM-201ENST00000227348 LRRC7Q96NW7 1537 aa11.67□□□□□ -0.54
CRTAM-201ENST00000227348 C1orf167Q5SNV9 1468 aa11.67□□□□□ -0.54
CRTAM-201ENST00000227348 NCOA3Q9Y6Q9 1424 aa11.67□□□□□ -0.54
CRTAM-201ENST00000227348 USP31Q70CQ4 1352 aa11.67□□□□□ -0.54
CRTAM-201ENST00000227348 CFAP53Q96M91 514 aa11.66□□□□□ -0.54
CRTAM-201ENST00000227348 C19orf44Q9H6X5 657 aa11.66□□□□□ -0.54
CRTAM-201ENST00000227348 IQSEC2Q5JU85 1478 aa11.66□□□□□ -0.54
CRTAM-201ENST00000227348 CDK12Q9NYV4 1490 aaPredicted RBP11.66□□□□□ -0.54
CRTAM-201ENST00000227348 MST1RQ04912 1400 aa11.66□□□□□ -0.54
CRTAM-201ENST00000227348 ZNF335Q9H4Z2 1342 aaPredicted RBP11.66□□□□□ -0.54
CRTAM-201ENST00000227348 ESCO1Q5FWF5 840 aa11.66□□□□□ -0.54
CRTAM-201ENST00000227348 DCCP43146 1447 aa11.66□□□□□ -0.54
CRTAM-201ENST00000227348 ABCB7O75027 752 aa11.65□□□□□ -0.54
CRTAM-201ENST00000227348 RRS1Q15050 365 aaKnown RBP11.65□□□□□ -0.54
CRTAM-201ENST00000227348 ZNF521Q96K83 1311 aa11.63□□□□□ -0.55
CRTAM-201ENST00000227348 BCCIPQ9P287 314 aaKnown RBP eCLIP11.63□□□□□ -0.55
CRTAM-201ENST00000227348 LTN1O94822 1766 aa11.63□□□□□ -0.55
CRTAM-201ENST00000227348 APAF1O14727 1248 aa11.63□□□□□ -0.55
CRTAM-201ENST00000227348 PPM1GO15355 546 aaPredicted RBP11.63□□□□□ -0.55
CRTAM-201ENST00000227348 HS6ST3Q8IZP7 471 aa11.63□□□□□ -0.55
CRTAM-201ENST00000227348 ALS2Q96Q42 1657 aa11.62□□□□□ -0.55
CRTAM-201ENST00000227348 CAPN15O75808 1086 aa11.62□□□□□ -0.55
CRTAM-201ENST00000227348 CDCA7LQ96GN5 454 aa11.62□□□□□ -0.55
CRTAM-201ENST00000227348 RGPD1P0DJD0 1748 aa11.62□□□□□ -0.55
CRTAM-201ENST00000227348 DIAPH1O60610 1272 aaKnown RBP11.62□□□□□ -0.55
CRTAM-201ENST00000227348 NUTM2GQ5VZR2 741 aa11.62□□□□□ -0.55
CRTAM-201ENST00000227348 FOXO3O43524 673 aa11.61□□□□□ -0.55
CRTAM-201ENST00000227348 U2AF1L5P0DN76 240 aaPredicted RBP11.61□□□□□ -0.55
CRTAM-201ENST00000227348 U2AF1Q01081 240 aaKnown RBP eCLIP11.61□□□□□ -0.55
CRTAM-201ENST00000227348 NUDCQ9Y266 331 aa11.61□□□□□ -0.55
CRTAM-201ENST00000227348 XPCQ01831 940 aaPredicted RBP11.61□□□□□ -0.55
CRTAM-201ENST00000227348 NAP1L5Q96NT1 182 aaPredicted RBP11.61□□□□□ -0.55
CRTAM-201ENST00000227348 PLEKHF1Q96S99 279 aa11.61□□□□□ -0.55
CRTAM-201ENST00000227348 NFAT5O94916 1531 aa11.6□□□□□ -0.55
CRTAM-201ENST00000227348 MSH6P52701 1360 aa11.6□□□□□ -0.55
CRTAM-201ENST00000227348 U2SURPO15042 1029 aaKnown RBP11.6□□□□□ -0.55
CRTAM-201ENST00000227348 SOX12O15370 315 aa11.6□□□□□ -0.55
CRTAM-201ENST00000227348 PAK3O75914 559 aaPredicted RBP11.6□□□□□ -0.55
CRTAM-201ENST00000227348 ATF3P18847 181 aa11.6□□□□□ -0.55
CRTAM-201ENST00000227348 IL13P35225 146 aa11.6□□□□□ -0.55
CRTAM-201ENST00000227348 NLRP6P59044 892 aa11.6□□□□□ -0.55
CRTAM-201ENST00000227348 RUNDC1Q96C34 613 aa11.6□□□□□ -0.55
CRTAM-201ENST00000227348 PSME1Q06323 249 aa11.6□□□□□ -0.55
CRTAM-201ENST00000227348 ABTB2Q8N961 1025 aa11.6□□□□□ -0.55
CRTAM-201ENST00000227348 MAP3K19Q56UN5 1328 aa11.59□□□□□ -0.55
CRTAM-201ENST00000227348 RBM10P98175 930 aaKnown RBP11.59□□□□□ -0.55
CRTAM-201ENST00000227348 DLG5Q8TDM6 1919 aa11.58□□□□□ -0.56
CRTAM-201ENST00000227348 HMGB1P09429 215 aaKnown RBP11.58□□□□□ -0.56
CRTAM-201ENST00000227348 PDE3BQ13370 1112 aa11.58□□□□□ -0.56
CRTAM-201ENST00000227348 CADPS2Q86UW7 1296 aa11.58□□□□□ -0.56
CRTAM-201ENST00000227348 TCP11L2Q8N4U5 519 aa11.58□□□□□ -0.56
CRTAM-201ENST00000227348 DDX17Q92841 729 aaKnown RBP11.58□□□□□ -0.56
CRTAM-201ENST00000227348 NOP58Q9Y2X3 529 aaKnown RBP11.58□□□□□ -0.56
CRTAM-201ENST00000227348 RRP7AQ9Y3A4 280 aaKnown RBP11.58□□□□□ -0.56
CRTAM-201ENST00000227348 SLIT3O75094 1523 aa11.57□□□□□ -0.56
CRTAM-201ENST00000227348 PHRF1Q9P1Y6 1649 aaKnown RBP11.57□□□□□ -0.56
CRTAM-201ENST00000227348 HSP90AB2PQ58FF8 381 aa11.57□□□□□ -0.56
CRTAM-201ENST00000227348 CRYBG1Q9Y4K1 1723 aa11.57□□□□□ -0.56
CRTAM-201ENST00000227348 EIF4A2Q14240 407 aaKnown RBP11.57□□□□□ -0.56
CRTAM-201ENST00000227348 IL27Q8NEV9 243 aa11.57□□□□□ -0.56
CRTAM-201ENST00000227348 SBNO1A3KN83 1393 aa11.56□□□□□ -0.56
CRTAM-201ENST00000227348 PXDNQ92626 1479 aa11.56□□□□□ -0.56
CRTAM-201ENST00000227348 GTPBP6O43824 516 aaPredicted RBP11.56□□□□□ -0.56
CRTAM-201ENST00000227348 MED1Q15648 1581 aaPredicted RBP11.56□□□□□ -0.56
CRTAM-201ENST00000227348 KRT28Q7Z3Y7 464 aa11.56□□□□□ -0.56
CRTAM-201ENST00000227348 WWC1Q8IX03 1113 aa11.55□□□□□ -0.56
CRTAM-201ENST00000227348 FLT4P35916 1363 aa11.55□□□□□ -0.56
CRTAM-201ENST00000227348 HMOX1P09601 288 aa11.55□□□□□ -0.56
CRTAM-201ENST00000227348 RGPD2P0DJD1 1756 aa11.55□□□□□ -0.56
CRTAM-201ENST00000227348 LTBP4Q8N2S1 1624 aa11.55□□□□□ -0.56
CRTAM-201ENST00000227348 RGPD5Q99666 1765 aa11.55□□□□□ -0.56
CRTAM-201ENST00000227348 NEUROD2Q15784 382 aa11.54□□□□□ -0.56
CRTAM-201ENST00000227348 RTL5Q5HYW3 569 aaPredicted RBP11.54□□□□□ -0.56
CRTAM-201ENST00000227348 DUSP27Q5VZP5 1158 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms