RNA–Protein interactions for RNA: ENST00000222345.10

SIPA1L3-201, Transcript of signal induced proliferation associated 1 like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1L3, Length 7,987 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3-201ENST00000222345 FAM177A1Q8N128 213 aaPredicted RBP16.14■□□□□ 0.17
SIPA1L3-201ENST00000222345 ZNF397Q8NF99 534 aaPredicted RBP16.14■□□□□ 0.17
SIPA1L3-201ENST00000222345 GSDMDP57764 484 aa16.14■□□□□ 0.17
SIPA1L3-201ENST00000222345 SPECC1LQ69YQ0 1117 aa16.14■□□□□ 0.17
SIPA1L3-201ENST00000222345 GTF2F1P35269 517 aaKnown RBP eCLIP16.14■□□□□ 0.17
SIPA1L3-201ENST00000222345 STAMBPO95630 424 aa16.13■□□□□ 0.17
SIPA1L3-201ENST00000222345 SMC1AQ14683 1233 aaKnown RBP16.13■□□□□ 0.17
SIPA1L3-201ENST00000222345 AEBP2Q6ZN18 517 aaPredicted RBP16.13■□□□□ 0.17
SIPA1L3-201ENST00000222345 CCDC175P0C221 793 aa16.13■□□□□ 0.17
SIPA1L3-201ENST00000222345 ME1P48163 572 aa16.13■□□□□ 0.17
SIPA1L3-201ENST00000222345 CDK5RAP3Q96JB5 506 aa16.12■□□□□ 0.17
SIPA1L3-201ENST00000222345 CYP46A1Q9Y6A2 500 aa16.12■□□□□ 0.17
SIPA1L3-201ENST00000222345 C1orf141Q5JVX7 400 aa16.12■□□□□ 0.17
SIPA1L3-201ENST00000222345 FOSBP53539 338 aa16.12■□□□□ 0.17
SIPA1L3-201ENST00000222345 CEP63Q96MT8 703 aa16.12■□□□□ 0.17
SIPA1L3-201ENST00000222345 PANK1Q8TE04 598 aa16.12■□□□□ 0.17
SIPA1L3-201ENST00000222345 SMARCC1Q92922 1105 aaPredicted RBP16.12■□□□□ 0.17
SIPA1L3-201ENST00000222345 SYCE3A1L190 88 aa16.11■□□□□ 0.17
SIPA1L3-201ENST00000222345 RNF187Q5TA31 235 aaPredicted RBP16.11■□□□□ 0.17
SIPA1L3-201ENST00000222345 SPATA32Q96LK8 384 aa16.11■□□□□ 0.17
SIPA1L3-201ENST00000222345 CARMIL2Q6F5E8 1435 aa16.11■□□□□ 0.17
SIPA1L3-201ENST00000222345 RIPK4P57078 832 aa16.11■□□□□ 0.17
SIPA1L3-201ENST00000222345 TAF4BQ92750 862 aa16.11■□□□□ 0.17
SIPA1L3-201ENST00000222345 RAD21O60216 631 aa16.1■□□□□ 0.17
SIPA1L3-201ENST00000222345 TNNT1P13805 278 aa16.1■□□□□ 0.17
SIPA1L3-201ENST00000222345 TUBB4BP68371 445 aa16.1■□□□□ 0.17
SIPA1L3-201ENST00000222345 CFAP57Q96MR6 1250 aa16.1■□□□□ 0.17
SIPA1L3-201ENST00000222345 CPSF2Q9P2I0 782 aaKnown RBP16.1■□□□□ 0.17
SIPA1L3-201ENST00000222345 PLEKHH2Q8IVE3 1493 aa16.1■□□□□ 0.17
SIPA1L3-201ENST00000222345 CAVIN2O95810 425 aa16.1■□□□□ 0.17
SIPA1L3-201ENST00000222345 KRI1Q8N9T8 703 aaKnown RBP16.1■□□□□ 0.17
SIPA1L3-201ENST00000222345 ZSCAN31Q96LW9 406 aaPredicted RBP16.1■□□□□ 0.17
SIPA1L3-201ENST00000222345 SETSIPP0DME0 302 aa16.1■□□□□ 0.17
SIPA1L3-201ENST00000222345 SRCIN1Q9C0H9 1055 aa16.1■□□□□ 0.17
SIPA1L3-201ENST00000222345 PDZRN3Q9UPQ7 1066 aa16.1■□□□□ 0.17
SIPA1L3-201ENST00000222345 ERC1Q8IUD2 1116 aa16.1■□□□□ 0.17
SIPA1L3-201ENST00000222345 CTAGE5O15320 804 aa16.09■□□□□ 0.17
SIPA1L3-201ENST00000222345 SMAP1Q8IYB5 467 aaPredicted RBP16.09■□□□□ 0.17
SIPA1L3-201ENST00000222345 HSPA4P34932 840 aa16.09■□□□□ 0.17
SIPA1L3-201ENST00000222345 FEZ1Q99689 392 aa16.09■□□□□ 0.17
SIPA1L3-201ENST00000222345 COG3Q96JB2 828 aa16.09■□□□□ 0.17
SIPA1L3-201ENST00000222345 SCAPERQ9BY12 1400 aa16.09■□□□□ 0.17
SIPA1L3-201ENST00000222345 TTC31Q49AM3 519 aaPredicted RBP16.09■□□□□ 0.17
SIPA1L3-201ENST00000222345 CCDC94Q9BW85 323 aaPredicted RBP16.09■□□□□ 0.17
SIPA1L3-201ENST00000222345 AKNAQ7Z591 1439 aa16.08■□□□□ 0.17
SIPA1L3-201ENST00000222345 DIAPH1O60610 1272 aaKnown RBP16.08■□□□□ 0.16
SIPA1L3-201ENST00000222345 FKBP5Q13451 457 aaPredicted RBP16.08■□□□□ 0.16
SIPA1L3-201ENST00000222345 PPP6R1Q9UPN7 881 aa16.08■□□□□ 0.16
SIPA1L3-201ENST00000222345 TDO2P48775 406 aa16.08■□□□□ 0.16
SIPA1L3-201ENST00000222345 LMAN1P49257 510 aa16.08■□□□□ 0.16
SIPA1L3-201ENST00000222345 KLHL34Q8N239 644 aa16.08■□□□□ 0.16
SIPA1L3-201ENST00000222345 ELL2O00472 640 aaPredicted RBP16.08■□□□□ 0.16
SIPA1L3-201ENST00000222345 TEFQ10587 303 aa16.08■□□□□ 0.16
SIPA1L3-201ENST00000222345 NAA15Q9BXJ9 866 aaKnown RBP16.08■□□□□ 0.16
SIPA1L3-201ENST00000222345 WDR66Q8TBY9 1149 aa16.08■□□□□ 0.16
SIPA1L3-201ENST00000222345 GNAI3P08754 354 aa16.07■□□□□ 0.16
SIPA1L3-201ENST00000222345 LARP1BQ659C4 914 aaKnown RBP16.07■□□□□ 0.16
SIPA1L3-201ENST00000222345 CTDP1Q9Y5B0 961 aaPredicted RBP16.07■□□□□ 0.16
SIPA1L3-201ENST00000222345 CCDC171Q6TFL3 1326 aa16.07■□□□□ 0.16
SIPA1L3-201ENST00000222345 UVSSAQ2YD98 709 aa16.07■□□□□ 0.16
SIPA1L3-201ENST00000222345 C6orf163Q5TEZ5 329 aa16.07■□□□□ 0.16
SIPA1L3-201ENST00000222345 WASHC2AQ641Q2 1341 aa16.07■□□□□ 0.16
SIPA1L3-201ENST00000222345 WASHC2CQ9Y4E1 1318 aa16.07■□□□□ 0.16
SIPA1L3-201ENST00000222345 CDKL5O76039 1030 aa16.07■□□□□ 0.16
SIPA1L3-201ENST00000222345 ANO10Q9NW15 660 aa16.07■□□□□ 0.16
SIPA1L3-201ENST00000222345 XPCQ01831 940 aaPredicted RBP16.06■□□□□ 0.16
SIPA1L3-201ENST00000222345 UBTFL1P0CB47 393 aaPredicted RBP16.06■□□□□ 0.16
SIPA1L3-201ENST00000222345 KIF20AO95235 890 aa16.06■□□□□ 0.16
SIPA1L3-201ENST00000222345 TUBB4AP04350 444 aa16.06■□□□□ 0.16
SIPA1L3-201ENST00000222345 CFAP100Q494V2 611 aa16.06■□□□□ 0.16
SIPA1L3-201ENST00000222345 IFFO1Q0D2I5 559 aa16.05■□□□□ 0.16
SIPA1L3-201ENST00000222345 VPS37DQ86XT2 251 aa16.05■□□□□ 0.16
SIPA1L3-201ENST00000222345 DAAM2Q86T65 1068 aa16.05■□□□□ 0.16
SIPA1L3-201ENST00000222345 RBM28Q9NW13 759 aaKnown RBP16.05■□□□□ 0.16
SIPA1L3-201ENST00000222345 SPA17Q15506 151 aa16.05■□□□□ 0.16
SIPA1L3-201ENST00000222345 URI1O94763 535 aaPredicted RBP16.05■□□□□ 0.16
SIPA1L3-201ENST00000222345 HNRNPMP52272 730 aaKnown RBP eCLIP16.05■□□□□ 0.16
SIPA1L3-201ENST00000222345 CLIP2Q9UDT6 1046 aa16.05■□□□□ 0.16
SIPA1L3-201ENST00000222345 PHF23Q9BUL5 403 aaPredicted RBP16.04■□□□□ 0.16
SIPA1L3-201ENST00000222345 HS1BP3Q53T59 392 aa16.04■□□□□ 0.16
SIPA1L3-201ENST00000222345 SEPT6Q14141 434 aa16.04■□□□□ 0.16
SIPA1L3-201ENST00000222345 TRIM22Q8IYM9 498 aa16.04■□□□□ 0.16
SIPA1L3-201ENST00000222345 TAOK3Q9H2K8 898 aa16.04■□□□□ 0.16
SIPA1L3-201ENST00000222345 FSD1Q9BTV5 496 aa16.04■□□□□ 0.16
SIPA1L3-201ENST00000222345 STAC3Q96MF2 364 aa16.04■□□□□ 0.16
SIPA1L3-201ENST00000222345 ANKRD18BA2A2Z9 1011 aa16.03■□□□□ 0.16
SIPA1L3-201ENST00000222345 KIF4BQ2VIQ3 1234 aa16.03■□□□□ 0.16
SIPA1L3-201ENST00000222345 ARFGAP3Q9NP61 516 aa16.03■□□□□ 0.16
SIPA1L3-201ENST00000222345 V9GYY5 206 aaPredicted RBP16.03■□□□□ 0.16
SIPA1L3-201ENST00000222345 DESP17661 470 aa16.03■□□□□ 0.16
SIPA1L3-201ENST00000222345 SLC3A2P08195 630 aaKnown RBP16.03■□□□□ 0.16
SIPA1L3-201ENST00000222345 PAFAH1B1P43034 410 aa16.03■□□□□ 0.16
SIPA1L3-201ENST00000222345 EFCAB2Q5VUJ9 269 aa16.03■□□□□ 0.16
SIPA1L3-201ENST00000222345 ANKS4BQ8N8V4 417 aa16.02■□□□□ 0.16
SIPA1L3-201ENST00000222345 C16orf45Q96MC5 204 aaPredicted RBP16.02■□□□□ 0.16
SIPA1L3-201ENST00000222345 CETN2P41208 172 aa16.02■□□□□ 0.16
SIPA1L3-201ENST00000222345 CEP135Q66GS9 1140 aa16.02■□□□□ 0.16
SIPA1L3-201ENST00000222345 SCAND2PQ9GZW5 306 aaPredicted RBP16.02■□□□□ 0.16
SIPA1L3-201ENST00000222345 SWAP70Q9UH65 585 aa16.02■□□□□ 0.16
SIPA1L3-201ENST00000222345 KRT32Q14532 448 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms