RNA–Protein interactions for RNA: ENST00000221166.9

NEFM-201, Transcript of neurofilament medium, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEFM, Length 4,020 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-201ENST00000221166 FOXD4L6Q3SYB3 417 aaPredicted RBP13.8□□□□□ -0.2
NEFM-201ENST00000221166 CYB5RLQ6IPT4 315 aa13.8□□□□□ -0.2
NEFM-201ENST00000221166 FOXD4L3Q6VB84 417 aaPredicted RBP13.8□□□□□ -0.2
NEFM-201ENST00000221166 CIZ1Q9ULV3 898 aaPredicted RBP13.8□□□□□ -0.2
NEFM-201ENST00000221166 VWDEQ8N2E2 1590 aa13.8□□□□□ -0.2
NEFM-201ENST00000221166 ZMYM3Q14202 1370 aa13.8□□□□□ -0.2
NEFM-201ENST00000221166 NRXN1Q9ULB1 1477 aa13.8□□□□□ -0.2
NEFM-201ENST00000221166 TULP4Q9NRJ4 1543 aa13.8□□□□□ -0.2
NEFM-201ENST00000221166 PLEKHG5O94827 1062 aa13.8□□□□□ -0.2
NEFM-201ENST00000221166 OTUD7AQ8TE49 926 aaPredicted RBP13.79□□□□□ -0.2
NEFM-201ENST00000221166 DEPDC5O75140 1603 aa13.79□□□□□ -0.2
NEFM-201ENST00000221166 YTHDC2Q9H6S0 1430 aaKnown RBP13.79□□□□□ -0.2
NEFM-201ENST00000221166 FSD2A1L4K1 749 aa13.79□□□□□ -0.2
NEFM-201ENST00000221166 ESPNB1AK53 854 aa13.79□□□□□ -0.2
NEFM-201ENST00000221166 AEBP1Q8IUX7 1158 aa13.79□□□□□ -0.2
NEFM-201ENST00000221166 SIRT2Q8IXJ6 389 aa13.79□□□□□ -0.2
NEFM-201ENST00000221166 CFAP44Q96MT7 982 aa13.79□□□□□ -0.2
NEFM-201ENST00000221166 POGZQ7Z3K3 1410 aa13.79□□□□□ -0.2
NEFM-201ENST00000221166 CAVIN1Q6NZI2 390 aaKnown RBP13.79□□□□□ -0.2
NEFM-201ENST00000221166 RTF1Q92541 710 aaKnown RBP13.79□□□□□ -0.2
NEFM-201ENST00000221166 NUDT16Q96DE0 195 aaKnown RBP13.79□□□□□ -0.2
NEFM-201ENST00000221166 INTS3Q68E01 1043 aaKnown RBP13.78□□□□□ -0.2
NEFM-201ENST00000221166 PTMSP20962 102 aa13.78□□□□□ -0.2
NEFM-201ENST00000221166 RAB3GAP1Q15042 981 aa13.78□□□□□ -0.2
NEFM-201ENST00000221166 GAS2L3Q86XJ1 694 aa13.78□□□□□ -0.2
NEFM-201ENST00000221166 PPIP5K1Q6PFW1 1433 aa13.78□□□□□ -0.2
NEFM-201ENST00000221166 SLC4A2P04920 1241 aa13.78□□□□□ -0.2
NEFM-201ENST00000221166 ARHGAP45Q92619 1136 aa13.78□□□□□ -0.2
NEFM-201ENST00000221166 ADGRB1O14514 1584 aa13.78□□□□□ -0.2
NEFM-201ENST00000221166 ST18O60284 1047 aa13.77□□□□□ -0.2
NEFM-201ENST00000221166 NASPP49321 788 aaPredicted RBP13.77□□□□□ -0.2
NEFM-201ENST00000221166 TRIM6-TRIM34B2RNG4 842 aa13.77□□□□□ -0.21
NEFM-201ENST00000221166 MROH1Q8NDA8 1641 aa13.77□□□□□ -0.21
NEFM-201ENST00000221166 RABEP1Q15276 862 aa13.77□□□□□ -0.21
NEFM-201ENST00000221166 PLEKHM2Q8IWE5 1019 aa13.77□□□□□ -0.21
NEFM-201ENST00000221166 ZBTB7CA1YPR0 619 aa13.76□□□□□ -0.21
NEFM-201ENST00000221166 IL13P35225 146 aa13.76□□□□□ -0.21
NEFM-201ENST00000221166 GLI2P10070 1586 aa13.76□□□□□ -0.21
NEFM-201ENST00000221166 SETBP1Q9Y6X0 1596 aa13.76□□□□□ -0.21
NEFM-201ENST00000221166 SHPRHQ149N8 1683 aa13.76□□□□□ -0.21
NEFM-201ENST00000221166 RILPL2Q969X0 211 aa13.76□□□□□ -0.21
NEFM-201ENST00000221166 WASLO00401 505 aaPredicted RBP13.76□□□□□ -0.21
NEFM-201ENST00000221166 PRPF40AO75400 957 aaKnown RBP13.76□□□□□ -0.21
NEFM-201ENST00000221166 HAP1P54257 671 aaPredicted RBP13.76□□□□□ -0.21
NEFM-201ENST00000221166 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.76□□□□□ -0.21
NEFM-201ENST00000221166 ZNF692Q9BU19 519 aaPredicted RBP13.76□□□□□ -0.21
NEFM-201ENST00000221166 F6X3S4 739 aa13.75□□□□□ -0.21
NEFM-201ENST00000221166 MSNP26038 577 aaKnown RBP13.75□□□□□ -0.21
NEFM-201ENST00000221166 BAG4O95429 457 aaKnown RBP13.75□□□□□ -0.21
NEFM-201ENST00000221166 GSPT1P15170 499 aaKnown RBP13.75□□□□□ -0.21
NEFM-201ENST00000221166 HMMRO75330 724 aa13.75□□□□□ -0.21
NEFM-201ENST00000221166 FAM69CQ0P6D2 419 aa13.75□□□□□ -0.21
NEFM-201ENST00000221166 TSHZ3Q63HK5 1081 aa13.75□□□□□ -0.21
NEFM-201ENST00000221166 C14orf37Q86TY3 774 aa13.75□□□□□ -0.21
NEFM-201ENST00000221166 KIDINS220Q9ULH0 1771 aa13.75□□□□□ -0.21
NEFM-201ENST00000221166 MEIS3Q99687 375 aa13.74□□□□□ -0.21
NEFM-201ENST00000221166 ABCC3O15438 1527 aa13.74□□□□□ -0.21
NEFM-201ENST00000221166 ABCA9Q8IUA7 1624 aa13.74□□□□□ -0.21
NEFM-201ENST00000221166 TTC22Q5TAA0 569 aa13.74□□□□□ -0.21
NEFM-201ENST00000221166 CCDC61Q9Y6R9 512 aa13.74□□□□□ -0.21
NEFM-201ENST00000221166 NUCB2P80303 420 aa13.74□□□□□ -0.21
NEFM-201ENST00000221166 TSPYL4Q9UJ04 414 aa13.74□□□□□ -0.21
NEFM-201ENST00000221166 CLCN1P35523 988 aa13.74□□□□□ -0.21
NEFM-201ENST00000221166 KIF2CQ99661 725 aa13.74□□□□□ -0.21
NEFM-201ENST00000221166 SDSP20132 328 aa13.73□□□□□ -0.21
NEFM-201ENST00000221166 REC8O95072 547 aa13.73□□□□□ -0.21
NEFM-201ENST00000221166 NEK4P51957 841 aa13.73□□□□□ -0.21
NEFM-201ENST00000221166 LTV1Q96GA3 475 aaPredicted RBP13.73□□□□□ -0.21
NEFM-201ENST00000221166 DCTPP1Q9H773 170 aa13.73□□□□□ -0.21
NEFM-201ENST00000221166 EXOC6BQ9Y2D4 811 aa13.73□□□□□ -0.21
NEFM-201ENST00000221166 STK31Q9BXU1 1019 aa13.73□□□□□ -0.21
NEFM-201ENST00000221166 HSP90AA2PQ14568 343 aaPredicted RBP13.72□□□□□ -0.21
NEFM-201ENST00000221166 LMTK2Q8IWU2 1503 aa13.72□□□□□ -0.21
NEFM-201ENST00000221166 YEATS2Q9ULM3 1422 aa13.72□□□□□ -0.21
NEFM-201ENST00000221166 GLIPR1L2Q4G1C9 344 aa13.72□□□□□ -0.21
NEFM-201ENST00000221166 RPAP2Q8IXW5 612 aaPredicted RBP13.72□□□□□ -0.21
NEFM-201ENST00000221166 MLH3Q9UHC1 1453 aa13.72□□□□□ -0.21
NEFM-201ENST00000221166 ZGPATQ8N5A5 531 aaKnown RBP13.71□□□□□ -0.21
NEFM-201ENST00000221166 ANO2Q9NQ90 1003 aa13.71□□□□□ -0.21
NEFM-201ENST00000221166 ABCC4O15439 1325 aa13.71□□□□□ -0.21
NEFM-201ENST00000221166 HSP90AB2PQ58FF8 381 aa13.71□□□□□ -0.21
NEFM-201ENST00000221166 ISY1Q9ULR0 285 aaKnown RBP13.71□□□□□ -0.21
NEFM-201ENST00000221166 AMPHP49418 695 aa13.71□□□□□ -0.22
NEFM-201ENST00000221166 FKBP5Q13451 457 aaPredicted RBP13.71□□□□□ -0.22
NEFM-201ENST00000221166 ANKRD44Q8N8A2 993 aa13.71□□□□□ -0.22
NEFM-201ENST00000221166 ZFYVE9O95405 1425 aa13.71□□□□□ -0.22
NEFM-201ENST00000221166 PTMAP06454 111 aaKnown RBP13.7□□□□□ -0.22
NEFM-201ENST00000221166 PKP1Q13835 747 aa13.7□□□□□ -0.22
NEFM-201ENST00000221166 CHAMP1Q96JM3 812 aa13.7□□□□□ -0.22
NEFM-201ENST00000221166 USP26Q9BXU7 913 aa13.7□□□□□ -0.22
NEFM-201ENST00000221166 RBM27Q9P2N5 1060 aaKnown RBP13.7□□□□□ -0.22
NEFM-201ENST00000221166 EIF4A2Q14240 407 aaKnown RBP13.7□□□□□ -0.22
NEFM-201ENST00000221166 RNF214Q8ND24 703 aa13.7□□□□□ -0.22
NEFM-201ENST00000221166 NUTM2GQ5VZR2 741 aa13.69□□□□□ -0.22
NEFM-201ENST00000221166 CEP85Q6P2H3 762 aa13.69□□□□□ -0.22
NEFM-201ENST00000221166 FOXO3O43524 673 aa13.69□□□□□ -0.22
NEFM-201ENST00000221166 MCCP23508 829 aa13.69□□□□□ -0.22
NEFM-201ENST00000221166 ERC2O15083 957 aa13.69□□□□□ -0.22
NEFM-201ENST00000221166 MYO3AQ8NEV4 1616 aa13.69□□□□□ -0.22
NEFM-201ENST00000221166 PNPLA6Q8IY17 1366 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms