RNA–Protein interactions for RNA: ENST00000215838.7

TCN2-201, Transcript of transcobalamin 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TCN2, Length 2,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN2-201ENST00000215838 KIF3BO15066 747 aa13.92□□□□□ -0.18
TCN2-201ENST00000215838 CDK11BP21127 795 aaKnown RBP13.92□□□□□ -0.18
TCN2-201ENST00000215838 HMGN5P82970 282 aaKnown RBP13.92□□□□□ -0.18
TCN2-201ENST00000215838 LRSAM1Q6UWE0 723 aa13.92□□□□□ -0.18
TCN2-201ENST00000215838 IRX5P78411 483 aaPredicted RBP13.91□□□□□ -0.18
TCN2-201ENST00000215838 LNPKQ9C0E8 428 aa13.91□□□□□ -0.18
TCN2-201ENST00000215838 EFCAB6Q5THR3 1501 aa13.91□□□□□ -0.18
TCN2-201ENST00000215838 ARHGAP31Q2M1Z3 1444 aa13.91□□□□□ -0.18
TCN2-201ENST00000215838 NOLC1Q14978 699 aaKnown RBP eCLIP13.9□□□□□ -0.18
TCN2-201ENST00000215838 TAF3Q5VWG9 929 aa13.9□□□□□ -0.18
TCN2-201ENST00000215838 FTSJ3Q8IY81 847 aaKnown RBP13.9□□□□□ -0.18
TCN2-201ENST00000215838 FER1L4A9Z1Z3 1794 aa13.89□□□□□ -0.19
TCN2-201ENST00000215838 ADAMTSL3P82987 1691 aa13.89□□□□□ -0.19
TCN2-201ENST00000215838 KIF16BQ96L93 1317 aa13.89□□□□□ -0.19
TCN2-201ENST00000215838 PIBF1Q8WXW3 757 aa13.89□□□□□ -0.19
TCN2-201ENST00000215838 TTC12Q9H892 705 aaPredicted RBP13.89□□□□□ -0.19
TCN2-201ENST00000215838 CYP2E1P05181 493 aaPredicted RBP13.88□□□□□ -0.19
TCN2-201ENST00000215838 KCNJ4P48050 445 aa13.88□□□□□ -0.19
TCN2-201ENST00000215838 HDAC1Q13547 482 aaPredicted RBP13.88□□□□□ -0.19
TCN2-201ENST00000215838 CLTCQ00610 1675 aaKnown RBP13.88□□□□□ -0.19
TCN2-201ENST00000215838 DZIP1LQ8IYY4 767 aaKnown RBP13.88□□□□□ -0.19
TCN2-201ENST00000215838 CHMP4AQ9BY43 222 aa13.88□□□□□ -0.19
TCN2-201ENST00000215838 ASXL1Q8IXJ9 1541 aa13.87□□□□□ -0.19
TCN2-201ENST00000215838 LAMC1P11047 1609 aa13.87□□□□□ -0.19
TCN2-201ENST00000215838 FOXD4L5Q5VV16 416 aaPredicted RBP13.86□□□□□ -0.19
TCN2-201ENST00000215838 ITPRIPQ8IWB1 547 aa13.86□□□□□ -0.19
TCN2-201ENST00000215838 FOXD4L4Q8WXT5 416 aaPredicted RBP13.86□□□□□ -0.19
TCN2-201ENST00000215838 ZKSCAN2Q63HK3 967 aa13.86□□□□□ -0.19
TCN2-201ENST00000215838 TBC1D9Q6ZT07 1266 aa13.86□□□□□ -0.19
TCN2-201ENST00000215838 NUCB2P80303 420 aa13.85□□□□□ -0.19
TCN2-201ENST00000215838 ZGPATQ8N5A5 531 aaKnown RBP13.85□□□□□ -0.19
TCN2-201ENST00000215838 ZDHHC9Q9Y397 364 aa13.85□□□□□ -0.19
TCN2-201ENST00000215838 SPHKAPQ2M3C7 1700 aa13.84□□□□□ -0.19
TCN2-201ENST00000215838 RIOK3O14730 519 aaKnown RBP13.84□□□□□ -0.19
TCN2-201ENST00000215838 FKBP5Q13451 457 aaPredicted RBP13.84□□□□□ -0.19
TCN2-201ENST00000215838 ANKRD7Q92527 254 aa13.84□□□□□ -0.19
TCN2-201ENST00000215838 TRIM27P14373 513 aa13.84□□□□□ -0.19
TCN2-201ENST00000215838 NUCB1Q02818 461 aa13.84□□□□□ -0.19
TCN2-201ENST00000215838 CERS3Q8IU89 383 aa13.83□□□□□ -0.2
TCN2-201ENST00000215838 TCP11L2Q8N4U5 519 aa13.83□□□□□ -0.2
TCN2-201ENST00000215838 MADDQ8WXG6 1647 aa13.83□□□□□ -0.2
TCN2-201ENST00000215838 GGT6Q6P531 493 aa13.83□□□□□ -0.2
TCN2-201ENST00000215838 BMP2KLQ5H9B9 411 aa13.82□□□□□ -0.2
TCN2-201ENST00000215838 NGEFQ8N5V2 710 aa13.82□□□□□ -0.2
TCN2-201ENST00000215838 PREX1Q8TCU6 1659 aa13.82□□□□□ -0.2
TCN2-201ENST00000215838 TRPM2O94759 1503 aa13.82□□□□□ -0.2
TCN2-201ENST00000215838 SLFN14P0C7P3 912 aa13.82□□□□□ -0.2
TCN2-201ENST00000215838 CHD1LQ86WJ1 897 aa13.82□□□□□ -0.2
TCN2-201ENST00000215838 USP25Q9UHP3 1055 aa13.82□□□□□ -0.2
TCN2-201ENST00000215838 TSPY26PQ9H489 355 aa13.81□□□□□ -0.2
TCN2-201ENST00000215838 PTPRTO14522 1441 aa13.81□□□□□ -0.2
TCN2-201ENST00000215838 SPTLC3Q9NUV7 552 aa13.81□□□□□ -0.2
TCN2-201ENST00000215838 SPATA31D1Q6ZQQ2 1576 aa13.8□□□□□ -0.2
TCN2-201ENST00000215838 RIMS1Q86UR5 1692 aaKnown RBP13.8□□□□□ -0.2
TCN2-201ENST00000215838 OGFRQ9NZT2 677 aa13.8□□□□□ -0.2
TCN2-201ENST00000215838 C3P01024 1663 aa13.8□□□□□ -0.2
TCN2-201ENST00000215838 NPATQ14207 1427 aa13.8□□□□□ -0.2
TCN2-201ENST00000215838 TSR2Q969E8 191 aaKnown RBP13.8□□□□□ -0.2
TCN2-201ENST00000215838 SMC4Q9NTJ3 1288 aa13.8□□□□□ -0.2
TCN2-201ENST00000215838 TMEM57Q8N5G2 664 aa13.79□□□□□ -0.2
TCN2-201ENST00000215838 FEZ1Q99689 392 aa13.79□□□□□ -0.2
TCN2-201ENST00000215838 DDX19BQ9UMR2 479 aa13.79□□□□□ -0.2
TCN2-201ENST00000215838 NOS1P29475 1434 aa13.78□□□□□ -0.2
TCN2-201ENST00000215838 NEURL4Q96JN8 1562 aa13.78□□□□□ -0.2
TCN2-201ENST00000215838 ANKRD45Q5TZF3 282 aa13.78□□□□□ -0.2
TCN2-201ENST00000215838 PIK3C2BO00750 1634 aa13.78□□□□□ -0.2
TCN2-201ENST00000215838 ERVK-7P63135 1459 aa13.78□□□□□ -0.2
TCN2-201ENST00000215838 ADCY5O95622 1261 aa13.78□□□□□ -0.2
TCN2-201ENST00000215838 CAPN2P17655 700 aa13.78□□□□□ -0.2
TCN2-201ENST00000215838 PHF23Q9BUL5 403 aaPredicted RBP13.78□□□□□ -0.2
TCN2-201ENST00000215838 ZBTB40Q9NUA8 1239 aa13.78□□□□□ -0.2
TCN2-201ENST00000215838 SYNMO15061 1565 aa13.77□□□□□ -0.2
TCN2-201ENST00000215838 NCBP1Q09161 790 aaKnown RBP13.77□□□□□ -0.21
TCN2-201ENST00000215838 RUNDC1Q96C34 613 aa13.77□□□□□ -0.21
TCN2-201ENST00000215838 ZFP91Q96JP5 570 aaPredicted RBP13.77□□□□□ -0.21
TCN2-201ENST00000215838 ESF1Q9H501 851 aaKnown RBP13.77□□□□□ -0.21
TCN2-201ENST00000215838 ERICH4A6NGS2 130 aa13.77□□□□□ -0.21
TCN2-201ENST00000215838 CTIFO43310 598 aaKnown RBP13.77□□□□□ -0.21
TCN2-201ENST00000215838 GABPB1Q06547 395 aaPredicted RBP13.77□□□□□ -0.21
TCN2-201ENST00000215838 NAA30Q147X3 362 aaPredicted RBP13.77□□□□□ -0.21
TCN2-201ENST00000215838 CDCA8Q53HL2 280 aa13.77□□□□□ -0.21
TCN2-201ENST00000215838 WDR63Q8IWG1 891 aa13.77□□□□□ -0.21
TCN2-201ENST00000215838 SSH1Q8WYL5 1049 aa13.77□□□□□ -0.21
TCN2-201ENST00000215838 CTNNA3Q9UI47 895 aa13.77□□□□□ -0.21
TCN2-201ENST00000215838 PYCARDQ9ULZ3 195 aa13.77□□□□□ -0.21
TCN2-201ENST00000215838 RABEP1Q15276 862 aa13.76□□□□□ -0.21
TCN2-201ENST00000215838 TRERF1Q96PN7 1200 aa13.76□□□□□ -0.21
TCN2-201ENST00000215838 NOB1Q9ULX3 412 aaKnown RBP13.76□□□□□ -0.21
TCN2-201ENST00000215838 FOXD4L6Q3SYB3 417 aaPredicted RBP13.75□□□□□ -0.21
TCN2-201ENST00000215838 FOXD4L3Q6VB84 417 aaPredicted RBP13.75□□□□□ -0.21
TCN2-201ENST00000215838 ZBTB9Q96C00 473 aa13.75□□□□□ -0.21
TCN2-201ENST00000215838 CARD14Q9BXL6 1004 aa13.75□□□□□ -0.21
TCN2-201ENST00000215838 NPC1L1Q9UHC9 1359 aa13.75□□□□□ -0.21
TCN2-201ENST00000215838 MLECQ14165 292 aa13.75□□□□□ -0.21
TCN2-201ENST00000215838 ATF7IPQ6VMQ6 1270 aa13.75□□□□□ -0.21
TCN2-201ENST00000215838 AEBP1Q8IUX7 1158 aa13.75□□□□□ -0.21
TCN2-201ENST00000215838 TIGD1Q96MW7 591 aa13.75□□□□□ -0.21
TCN2-201ENST00000215838 KDM5AP29375 1690 aaKnown RBP13.74□□□□□ -0.21
TCN2-201ENST00000215838 DNAJC2Q99543 621 aaKnown RBP13.74□□□□□ -0.21
TCN2-201ENST00000215838 DIAPH3Q9NSV4 1193 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms