RNA–Protein interactions for RNA: ENST00000173898.11

TRO-201, Transcript of trophinin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRO, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-201ENST00000173898 TCEAL9Q9UHQ7 104 aa14.35□□□□□ -0.11
TRO-201ENST00000173898 WDR33Q9C0J8 1336 aaKnown RBP14.35□□□□□ -0.11
TRO-201ENST00000173898 CCDC173Q0VFZ6 552 aa14.35□□□□□ -0.11
TRO-201ENST00000173898 PDILTQ8N807 584 aa14.35□□□□□ -0.11
TRO-201ENST00000173898 BRMS1Q9HCU9 246 aa14.35□□□□□ -0.11
TRO-201ENST00000173898 EXOC6BQ9Y2D4 811 aa14.35□□□□□ -0.11
TRO-201ENST00000173898 NUDT16Q96DE0 195 aaKnown RBP14.34□□□□□ -0.11
TRO-201ENST00000173898 CIZ1Q9ULV3 898 aaPredicted RBP14.34□□□□□ -0.11
TRO-201ENST00000173898 ABCC5O15440 1437 aa14.34□□□□□ -0.11
TRO-201ENST00000173898 HMGXB3Q12766 1538 aa14.34□□□□□ -0.11
TRO-201ENST00000173898 MYL6BP14649 208 aa14.34□□□□□ -0.11
TRO-201ENST00000173898 STK38Q15208 465 aa14.34□□□□□ -0.11
TRO-201ENST00000173898 MPNDQ8N594 471 aa14.34□□□□□ -0.11
TRO-201ENST00000173898 GRPEL1Q9HAV7 217 aa14.34□□□□□ -0.11
TRO-201ENST00000173898 STRN4Q9NRL3 753 aa14.34□□□□□ -0.11
TRO-201ENST00000173898 RRP12Q5JTH9 1297 aaKnown RBP14.34□□□□□ -0.11
TRO-201ENST00000173898 MIS18AQ9NYP9 233 aa14.34□□□□□ -0.11
TRO-201ENST00000173898 CCDC158Q5M9N0 1113 aa14.33□□□□□ -0.12
TRO-201ENST00000173898 ARHGEF11O15085 1522 aa14.33□□□□□ -0.12
TRO-201ENST00000173898 DCTN1Q14203 1278 aa14.33□□□□□ -0.12
TRO-201ENST00000173898 LARP1BQ659C4 914 aaKnown RBP14.33□□□□□ -0.12
TRO-201ENST00000173898 WAPLQ7Z5K2 1190 aa14.33□□□□□ -0.12
TRO-201ENST00000173898 AACSQ86V21 672 aa14.33□□□□□ -0.12
TRO-201ENST00000173898 ARGLU1Q9NWB6 273 aaPredicted RBP14.33□□□□□ -0.12
TRO-201ENST00000173898 KIF6Q6ZMV9 814 aa14.32□□□□□ -0.12
TRO-201ENST00000173898 CNNM1Q9NRU3 951 aa14.32□□□□□ -0.12
TRO-201ENST00000173898 CTDP1Q9Y5B0 961 aaPredicted RBP14.32□□□□□ -0.12
TRO-201ENST00000173898 CABP4P57796 275 aa14.32□□□□□ -0.12
TRO-201ENST00000173898 KRT85P78386 507 aa14.32□□□□□ -0.12
TRO-201ENST00000173898 TEX35Q5T0J7 233 aa14.32□□□□□ -0.12
TRO-201ENST00000173898 BLOC1S2Q6QNY1 142 aa14.32□□□□□ -0.12
TRO-201ENST00000173898 CWC27Q6UX04 472 aaKnown RBP14.32□□□□□ -0.12
TRO-201ENST00000173898 SMC2O95347 1197 aa14.32□□□□□ -0.12
TRO-201ENST00000173898 ANKRD1Q15327 319 aa14.32□□□□□ -0.12
TRO-201ENST00000173898 SAMD1Q6SPF0 538 aaPredicted RBP14.32□□□□□ -0.12
TRO-201ENST00000173898 MCM10Q7L590 875 aa14.32□□□□□ -0.12
TRO-201ENST00000173898 SPC24Q8NBT2 197 aa14.32□□□□□ -0.12
TRO-201ENST00000173898 ZNF396Q96N95 335 aaPredicted RBP14.32□□□□□ -0.12
TRO-201ENST00000173898 DDX54Q8TDD1 881 aaKnown RBP14.31□□□□□ -0.12
TRO-201ENST00000173898 NAP1L1P55209 391 aaKnown RBP14.31□□□□□ -0.12
TRO-201ENST00000173898 AEBP1Q8IUX7 1158 aa14.31□□□□□ -0.12
TRO-201ENST00000173898 CCDC192P0DO97 292 aa14.31□□□□□ -0.12
TRO-201ENST00000173898 CCDC141Q6ZP82 1450 aa14.31□□□□□ -0.12
TRO-201ENST00000173898 DUSP27Q5VZP5 1158 aa14.3□□□□□ -0.12
TRO-201ENST00000173898 TTC39AQ5SRH9 613 aa14.3□□□□□ -0.12
TRO-201ENST00000173898 ABCA10Q8WWZ4 1543 aa14.3□□□□□ -0.12
TRO-201ENST00000173898 ME1P48163 572 aa14.3□□□□□ -0.12
TRO-201ENST00000173898 JAKMIP1Q96N16 626 aaKnown RBP14.3□□□□□ -0.12
TRO-201ENST00000173898 DNMBPQ6XZF7 1577 aa14.3□□□□□ -0.12
TRO-201ENST00000173898 BTBD11A6QL63 1104 aa14.3□□□□□ -0.12
TRO-201ENST00000173898 ADGRF5Q8IZF2 1346 aa14.3□□□□□ -0.12
TRO-201ENST00000173898 PCF11O94913 1555 aaKnown RBP14.29□□□□□ -0.12
TRO-201ENST00000173898 NCOA1Q15788 1441 aa14.29□□□□□ -0.12
TRO-201ENST00000173898 TOM1L2Q6ZVM7 507 aa14.29□□□□□ -0.12
TRO-201ENST00000173898 MAGI1Q96QZ7 1491 aaPredicted RBP14.29□□□□□ -0.12
TRO-201ENST00000173898 TNMDQ9H2S6 317 aa14.29□□□□□ -0.12
TRO-201ENST00000173898 PLB1Q6P1J6 1458 aa14.29□□□□□ -0.12
TRO-201ENST00000173898 CCDC43Q96MW1 224 aaKnown RBP14.29□□□□□ -0.12
TRO-201ENST00000173898 UPF3BQ9BZI7 483 aaKnown RBP14.29□□□□□ -0.12
TRO-201ENST00000173898 OFD1O75665 1012 aa14.28□□□□□ -0.12
TRO-201ENST00000173898 NUTM1Q86Y26 1132 aa14.28□□□□□ -0.12
TRO-201ENST00000173898 JMYQ8N9B5 988 aa14.28□□□□□ -0.12
TRO-201ENST00000173898 SPG7Q9UQ90 795 aa14.28□□□□□ -0.12
TRO-201ENST00000173898 HMGN5P82970 282 aaKnown RBP14.28□□□□□ -0.12
TRO-201ENST00000173898 FKBP4Q02790 459 aaKnown RBP eCLIP14.28□□□□□ -0.12
TRO-201ENST00000173898 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.28□□□□□ -0.12
TRO-201ENST00000173898 PDRG1Q9NUG6 133 aa14.28□□□□□ -0.12
TRO-201ENST00000173898 GNAT3A8MTJ3 354 aa14.28□□□□□ -0.12
TRO-201ENST00000173898 CCDC57Q2TAC2 916 aa14.28□□□□□ -0.12
TRO-201ENST00000173898 TTLL5Q6EMB2 1281 aa14.28□□□□□ -0.12
TRO-201ENST00000173898 XPCQ01831 940 aaPredicted RBP14.27□□□□□ -0.12
TRO-201ENST00000173898 ALDH1L2Q3SY69 923 aa14.27□□□□□ -0.12
TRO-201ENST00000173898 NME9Q86XW9 330 aa14.27□□□□□ -0.12
TRO-201ENST00000173898 MAP7D2Q96T17 732 aa14.27□□□□□ -0.12
TRO-201ENST00000173898 CEP126Q9P2H0 1117 aa14.27□□□□□ -0.12
TRO-201ENST00000173898 CAMSAP2Q08AD1 1489 aa14.27□□□□□ -0.13
TRO-201ENST00000173898 SMARCA5O60264 1052 aaPredicted RBP14.27□□□□□ -0.13
TRO-201ENST00000173898 MTERF4Q7Z6M4 381 aaKnown RBP14.27□□□□□ -0.13
TRO-201ENST00000173898 EMILIN1Q9Y6C2 1016 aa14.27□□□□□ -0.13
TRO-201ENST00000173898 HSP90B2PQ58FF3 399 aa14.27□□□□□ -0.13
TRO-201ENST00000173898 NKTRP30414 1462 aaKnown RBP14.26□□□□□ -0.13
TRO-201ENST00000173898 ESPNB1AK53 854 aa14.26□□□□□ -0.13
TRO-201ENST00000173898 ZC3H6P61129 1189 aaKnown RBP14.26□□□□□ -0.13
TRO-201ENST00000173898 PRM3Q9NNZ6 103 aa14.26□□□□□ -0.13
TRO-201ENST00000173898 PRDM11Q9NQV5 511 aa14.26□□□□□ -0.13
TRO-201ENST00000173898 CC2D2AQ9P2K1 1620 aa14.26□□□□□ -0.13
TRO-201ENST00000173898 BRPF1P55201 1214 aaPredicted RBP14.26□□□□□ -0.13
TRO-201ENST00000173898 ANKLE2Q86XL3 938 aa14.26□□□□□ -0.13
TRO-201ENST00000173898 ABCC11Q96J66 1382 aa14.26□□□□□ -0.13
TRO-201ENST00000173898 TRIM27P14373 513 aa14.26□□□□□ -0.13
TRO-201ENST00000173898 STK11IPQ8N1F8 1099 aa14.26□□□□□ -0.13
TRO-201ENST00000173898 ZSCAN31Q96LW9 406 aaPredicted RBP14.26□□□□□ -0.13
TRO-201ENST00000173898 MX1P20591 662 aa14.25□□□□□ -0.13
TRO-201ENST00000173898 MEX3CQ5U5Q3 659 aaKnown RBP14.25□□□□□ -0.13
TRO-201ENST00000173898 KIF1BPQ96EK5 621 aa14.25□□□□□ -0.13
TRO-201ENST00000173898 TRIM22Q8IYM9 498 aa14.25□□□□□ -0.13
TRO-201ENST00000173898 LRPPRCP42704 1394 aaKnown RBP14.25□□□□□ -0.13
TRO-201ENST00000173898 RPRD2Q5VT52 1461 aaKnown RBP14.25□□□□□ -0.13
TRO-201ENST00000173898 FILIP1LQ4L180 1135 aa14.25□□□□□ -0.13
TRO-201ENST00000173898 SPATA32Q96LK8 384 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms