RNA–Protein interactions for RNA: ENST00000054950.3

RCN1-201, Transcript of reticulocalbin 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCN1, Length 2,572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-201ENST00000054950 ZRANB1Q9UGI0 708 aa25.3■■□□□ 1.64
RCN1-201ENST00000054950 ZFYVE9O95405 1425 aa25.3■■□□□ 1.64
RCN1-201ENST00000054950 RAB3GAP1Q15042 981 aa25.3■■□□□ 1.64
RCN1-201ENST00000054950 SLC52A1Q9NWF4 448 aa25.3■■□□□ 1.64
RCN1-201ENST00000054950 TMEM131LA2VDJ0 1609 aa25.29■■□□□ 1.64
RCN1-201ENST00000054950 YEATS2Q9ULM3 1422 aa25.28■■□□□ 1.64
RCN1-201ENST00000054950 FAM83GA6ND36 823 aa25.28■■□□□ 1.64
RCN1-201ENST00000054950 GCC1Q96CN9 775 aa25.28■■□□□ 1.64
RCN1-201ENST00000054950 ARHGEF40Q8TER5 1519 aa25.28■■□□□ 1.64
RCN1-201ENST00000054950 MAP2P11137 1827 aaKnown RBP25.28■■□□□ 1.64
RCN1-201ENST00000054950 C8orf58Q8NAV2 365 aa25.27■■□□□ 1.64
RCN1-201ENST00000054950 GAS2L2Q8NHY3 880 aa25.27■■□□□ 1.64
RCN1-201ENST00000054950 NAP1L5Q96NT1 182 aaPredicted RBP25.27■■□□□ 1.64
RCN1-201ENST00000054950 PTCH1Q13635 1447 aa25.27■■□□□ 1.64
RCN1-201ENST00000054950 SSFA2P28290 1259 aa25.26■■□□□ 1.63
RCN1-201ENST00000054950 DCTN1Q14203 1278 aa25.26■■□□□ 1.63
RCN1-201ENST00000054950 ERBB4Q15303 1308 aa25.26■■□□□ 1.63
RCN1-201ENST00000054950 ARHGAP31Q2M1Z3 1444 aa25.26■■□□□ 1.63
RCN1-201ENST00000054950 BRPF1P55201 1214 aaPredicted RBP25.26■■□□□ 1.63
RCN1-201ENST00000054950 CDC42BPGQ6DT37 1551 aa25.26■■□□□ 1.63
RCN1-201ENST00000054950 K7ELQ4 463 aaPredicted RBP25.25■■□□□ 1.63
RCN1-201ENST00000054950 AK9Q5TCS8 1911 aa25.25■■□□□ 1.63
RCN1-201ENST00000054950 GSPT1P15170 499 aaKnown RBP25.25■■□□□ 1.63
RCN1-201ENST00000054950 TWISTNBQ3B726 338 aaPredicted RBP25.25■■□□□ 1.63
RCN1-201ENST00000054950 ABCC4O15439 1325 aa25.24■■□□□ 1.63
RCN1-201ENST00000054950 CLCN1P35523 988 aa25.24■■□□□ 1.63
RCN1-201ENST00000054950 GBP4Q96PP9 640 aa25.24■■□□□ 1.63
RCN1-201ENST00000054950 NME9Q86XW9 330 aa25.24■■□□□ 1.63
RCN1-201ENST00000054950 PREX1Q8TCU6 1659 aa25.24■■□□□ 1.63
RCN1-201ENST00000054950 ALKQ9UM73 1620 aa25.24■■□□□ 1.63
RCN1-201ENST00000054950 PIK3R4Q99570 1358 aa25.23■■□□□ 1.63
RCN1-201ENST00000054950 CIZ1Q9ULV3 898 aaPredicted RBP25.23■■□□□ 1.63
RCN1-201ENST00000054950 GNAI1P63096 354 aa25.22■■□□□ 1.63
RCN1-201ENST00000054950 C16orf71Q8IYS4 520 aaPredicted RBP25.22■■□□□ 1.63
RCN1-201ENST00000054950 ARHGAP45Q92619 1136 aa25.21■■□□□ 1.63
RCN1-201ENST00000054950 ZNF428Q96B54 188 aa25.21■■□□□ 1.63
RCN1-201ENST00000054950 IFT57Q9NWB7 429 aa25.21■■□□□ 1.63
RCN1-201ENST00000054950 STAG3Q9UJ98 1225 aa25.21■■□□□ 1.63
RCN1-201ENST00000054950 IL13P35225 146 aa25.21■■□□□ 1.63
RCN1-201ENST00000054950 RRS1Q15050 365 aaKnown RBP25.21■■□□□ 1.63
RCN1-201ENST00000054950 KNDC1Q76NI1 1749 aa25.2■■□□□ 1.62
RCN1-201ENST00000054950 NCKAP5LQ9HCH0 1330 aa25.2■■□□□ 1.62
RCN1-201ENST00000054950 ZNF853P0CG23 659 aa25.2■■□□□ 1.62
RCN1-201ENST00000054950 KRT24Q2M2I5 525 aa25.19■■□□□ 1.62
RCN1-201ENST00000054950 DLG5Q8TDM6 1919 aa25.18■■□□□ 1.62
RCN1-201ENST00000054950 CDC45O75419 566 aa25.18■■□□□ 1.62
RCN1-201ENST00000054950 OTUD7AQ8TE49 926 aaPredicted RBP25.18■■□□□ 1.62
RCN1-201ENST00000054950 PLEKHM2Q8IWE5 1019 aa25.18■■□□□ 1.62
RCN1-201ENST00000054950 APBB1O00213 710 aa25.17■■□□□ 1.62
RCN1-201ENST00000054950 UBE2Q2Q8WVN8 375 aa25.17■■□□□ 1.62
RCN1-201ENST00000054950 ESPNB1AK53 854 aa25.16■■□□□ 1.62
RCN1-201ENST00000054950 CALD1Q05682 793 aaKnown RBP25.15■■□□□ 1.62
RCN1-201ENST00000054950 CFAP44Q96MT7 982 aa25.15■■□□□ 1.62
RCN1-201ENST00000054950 CHMP4BQ9H444 224 aaKnown RBP25.14■■□□□ 1.62
RCN1-201ENST00000054950 NEO1Q92859 1461 aa25.14■■□□□ 1.61
RCN1-201ENST00000054950 RICTORQ6R327 1708 aa25.14■■□□□ 1.61
RCN1-201ENST00000054950 RIMS2Q9UQ26 1411 aa25.12■■□□□ 1.61
RCN1-201ENST00000054950 SMARCA5O60264 1052 aaPredicted RBP25.12■■□□□ 1.61
RCN1-201ENST00000054950 API5Q9BZZ5 524 aaKnown RBP25.12■■□□□ 1.61
RCN1-201ENST00000054950 PKP1Q13835 747 aa25.11■■□□□ 1.61
RCN1-201ENST00000054950 BAG4O95429 457 aaKnown RBP25.11■■□□□ 1.61
RCN1-201ENST00000054950 SKOR2Q2VWA4 1001 aaPredicted RBP25.11■■□□□ 1.61
RCN1-201ENST00000054950 TRIM44Q96DX7 344 aaPredicted RBP25.11■■□□□ 1.61
RCN1-201ENST00000054950 ATP7BP35670 1465 aa25.11■■□□□ 1.61
RCN1-201ENST00000054950 TTC22Q5TAA0 569 aa25.1■■□□□ 1.61
RCN1-201ENST00000054950 AEBP1Q8IUX7 1158 aa25.1■■□□□ 1.61
RCN1-201ENST00000054950 ISY1Q9ULR0 285 aaKnown RBP25.1■■□□□ 1.61
RCN1-201ENST00000054950 DCTPP1Q9H773 170 aa25.09■■□□□ 1.61
RCN1-201ENST00000054950 DDX49Q9Y6V7 483 aaKnown RBP25.09■■□□□ 1.61
RCN1-201ENST00000054950 MCTP1Q6DN14 999 aa25.07■■□□□ 1.6
RCN1-201ENST00000054950 CPS1P31327 1500 aa25.07■■□□□ 1.6
RCN1-201ENST00000054950 CDK12Q9NYV4 1490 aaPredicted RBP25.07■■□□□ 1.6
RCN1-201ENST00000054950 USP26Q9BXU7 913 aa25.06■■□□□ 1.6
RCN1-201ENST00000054950 ATP10DQ9P241 1426 aa25.05■■□□□ 1.6
RCN1-201ENST00000054950 COG3Q96JB2 828 aa25.05■■□□□ 1.6
RCN1-201ENST00000054950 CHAMP1Q96JM3 812 aa25.05■■□□□ 1.6
RCN1-201ENST00000054950 CPSF1Q10570 1443 aaKnown RBP25.05■■□□□ 1.6
RCN1-201ENST00000054950 EDC4Q6P2E9 1401 aaKnown RBP25.05■■□□□ 1.6
RCN1-201ENST00000054950 SDSP20132 328 aa25.04■■□□□ 1.6
RCN1-201ENST00000054950 MCM10Q7L590 875 aa25.04■■□□□ 1.6
RCN1-201ENST00000054950 TXNDC2Q86VQ3 553 aa25.04■■□□□ 1.6
RCN1-201ENST00000054950 GOLGA6L22H0YM25 854 aa25.04■■□□□ 1.6
RCN1-201ENST00000054950 WASLO00401 505 aaPredicted RBP25.04■■□□□ 1.6
RCN1-201ENST00000054950 NCLP19338 710 aaKnown RBP25.04■■□□□ 1.6
RCN1-201ENST00000054950 LMOD3Q0VAK6 560 aa25.04■■□□□ 1.6
RCN1-201ENST00000054950 RABEP1Q15276 862 aa25.04■■□□□ 1.6
RCN1-201ENST00000054950 MSH6P52701 1360 aa25.04■■□□□ 1.6
RCN1-201ENST00000054950 ZGPATQ8N5A5 531 aaKnown RBP25.03■■□□□ 1.6
RCN1-201ENST00000054950 NASPP49321 788 aaPredicted RBP25.03■■□□□ 1.6
RCN1-201ENST00000054950 CEP85Q6P2H3 762 aa25.03■■□□□ 1.6
RCN1-201ENST00000054950 ANKRD44Q8N8A2 993 aa25.03■■□□□ 1.6
RCN1-201ENST00000054950 MEIS3Q99687 375 aa25.03■■□□□ 1.6
RCN1-201ENST00000054950 RGS12O14924 1447 aa25.03■■□□□ 1.6
RCN1-201ENST00000054950 RIMBP3CA6NJZ7 1639 aa25.02■■□□□ 1.6
RCN1-201ENST00000054950 RIMBP3BA6NNM3 1639 aa25.02■■□□□ 1.6
RCN1-201ENST00000054950 RIMBP3Q9UFD9 1639 aa25.02■■□□□ 1.6
RCN1-201ENST00000054950 KLHL40Q2TBA0 621 aa25.02■■□□□ 1.6
RCN1-201ENST00000054950 INTS3Q68E01 1043 aaKnown RBP25.01■■□□□ 1.6
RCN1-201ENST00000054950 OSCARQ8IYS5 282 aa25.01■■□□□ 1.6
RCN1-201ENST00000054950 NUDT16Q96DE0 195 aaKnown RBP25.01■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms