RNA–Protein interactions for RNA: ENSMUST00000213114.1

Ldlr-202, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,318 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-202ENSMUST00000213114 Asxl2Q8BZ32 1370 aa11.42□□□□□ -0.58
Ldlr-202ENSMUST00000213114 Rnf20Q5DTM8 973 aa11.41□□□□□ -0.58
Ldlr-202ENSMUST00000213114 TkfcQ8VC30 578 aa11.41□□□□□ -0.58
Ldlr-202ENSMUST00000213114 Supt6hQ62383 1726 aaKnown RBP11.41□□□□□ -0.58
Ldlr-202ENSMUST00000213114 Edc4Q3UJB9 1406 aaKnown RBP11.41□□□□□ -0.58
Ldlr-202ENSMUST00000213114 Becn1O88597 448 aa11.41□□□□□ -0.58
Ldlr-202ENSMUST00000213114 Kif4P33174 1231 aa11.41□□□□□ -0.58
Ldlr-202ENSMUST00000213114 Mad1l1Q9WTX8 717 aaKnown RBP11.41□□□□□ -0.58
Ldlr-202ENSMUST00000213114 Speer4bQ9D9F7 267 aa11.41□□□□□ -0.58
Ldlr-202ENSMUST00000213114 Gm21680A0A0G2JGR8 267 aa11.41□□□□□ -0.58
Ldlr-202ENSMUST00000213114 Babam1Q3UI43 333 aa11.41□□□□□ -0.58
Ldlr-202ENSMUST00000213114 Kdm6bQ5NCY0 1641 aa11.4□□□□□ -0.58
Ldlr-202ENSMUST00000213114 Smg7Q5RJH6 1138 aaKnown RBP11.4□□□□□ -0.58
Ldlr-202ENSMUST00000213114 Dennd4bQ3U1Y4 1499 aa11.4□□□□□ -0.58
Ldlr-202ENSMUST00000213114 Ankrd44B2RXR6 993 aa11.4□□□□□ -0.58
Ldlr-202ENSMUST00000213114 Hs1bp3Q3TC93 395 aa11.4□□□□□ -0.58
Ldlr-202ENSMUST00000213114 TefQ9JLC6 301 aa11.4□□□□□ -0.58
Ldlr-202ENSMUST00000213114 Dnmt1P13864 1620 aaKnown RBP11.4□□□□□ -0.58
Ldlr-202ENSMUST00000213114 Sf3b2Q3UJB0 878 aaKnown RBP11.4□□□□□ -0.58
Ldlr-202ENSMUST00000213114 Adgrl3Q80TS3 1537 aa11.4□□□□□ -0.59
Ldlr-202ENSMUST00000213114 Phlpp2Q8BXA7 1320 aa11.4□□□□□ -0.59
Ldlr-202ENSMUST00000213114 Ush1cQ9ES64 910 aa11.39□□□□□ -0.59
Ldlr-202ENSMUST00000213114 Fam50bQ9WTJ8 334 aa11.39□□□□□ -0.59
Ldlr-202ENSMUST00000213114 Cyb5rlB1AS42 316 aa11.39□□□□□ -0.59
Ldlr-202ENSMUST00000213114 Fbxo2Q80UW2 297 aa11.39□□□□□ -0.59
Ldlr-202ENSMUST00000213114 FosbP13346 338 aa11.39□□□□□ -0.59
Ldlr-202ENSMUST00000213114 Ptpdc1Q6NZK8 747 aa11.39□□□□□ -0.59
Ldlr-202ENSMUST00000213114 Ints3Q7TPD0 1041 aaKnown RBP11.39□□□□□ -0.59
Ldlr-202ENSMUST00000213114 Ppp1r42Q8R1Z4 357 aa11.39□□□□□ -0.59
Ldlr-202ENSMUST00000213114 Gm21663A0A0G2JE01 267 aa11.38□□□□□ -0.59
Ldlr-202ENSMUST00000213114 Gm7361D3Z6R1 267 aa11.38□□□□□ -0.59
Ldlr-202ENSMUST00000213114 5031410I06RikE9Q4E0 267 aa11.38□□□□□ -0.59
Ldlr-202ENSMUST00000213114 Gm1979E9QAN3 267 aa11.38□□□□□ -0.59
Ldlr-202ENSMUST00000213114 Gm5862K7N5V5 267 aa11.38□□□□□ -0.59
Ldlr-202ENSMUST00000213114 Gm10220K7N660 267 aa11.38□□□□□ -0.59
Ldlr-202ENSMUST00000213114 Btbd11Q6GQW0 1109 aa11.38□□□□□ -0.59
Ldlr-202ENSMUST00000213114 Tbc1d9Q3UYK3 1264 aa11.38□□□□□ -0.59
Ldlr-202ENSMUST00000213114 NexnQ7TPW1 607 aa11.38□□□□□ -0.59
Ldlr-202ENSMUST00000213114 Nol8Q3UHX0 1147 aaKnown RBP11.37□□□□□ -0.59
Ldlr-202ENSMUST00000213114 AnlnQ8K298 1121 aaKnown RBP11.37□□□□□ -0.59
Ldlr-202ENSMUST00000213114 Bicd2Q921C5 820 aa11.37□□□□□ -0.59
Ldlr-202ENSMUST00000213114 Gm16486A0A1D5RMD1 1434 aa11.37□□□□□ -0.59
Ldlr-202ENSMUST00000213114 Chrna2Q91X60 512 aa11.37□□□□□ -0.59
Ldlr-202ENSMUST00000213114 Wdr63B2RY71 923 aa11.36□□□□□ -0.59
Ldlr-202ENSMUST00000213114 Cchcr1Q8K2I2 770 aa11.36□□□□□ -0.59
Ldlr-202ENSMUST00000213114 Mical1Q8VDP3 1048 aa11.36□□□□□ -0.59
Ldlr-202ENSMUST00000213114 Acsbg1Q99PU5 721 aa11.36□□□□□ -0.59
Ldlr-202ENSMUST00000213114 PhaxQ9JJT9 385 aaKnown RBP11.36□□□□□ -0.59
Ldlr-202ENSMUST00000213114 Cspp1B2RX88 1205 aa11.36□□□□□ -0.59
Ldlr-202ENSMUST00000213114 Eva1cP58659 440 aa11.36□□□□□ -0.59
Ldlr-202ENSMUST00000213114 Q9D9S1 216 aa11.36□□□□□ -0.59
Ldlr-202ENSMUST00000213114 Fmn2Q9JL04 1578 aa11.36□□□□□ -0.59
Ldlr-202ENSMUST00000213114 Vamp4O70480 141 aa11.36□□□□□ -0.59
Ldlr-202ENSMUST00000213114 RdxP26043 583 aaKnown RBP11.36□□□□□ -0.59
Ldlr-202ENSMUST00000213114 Kiaa0754Q69ZZ9 979 aa11.36□□□□□ -0.59
Ldlr-202ENSMUST00000213114 Ppm1fQ8CGA0 452 aa11.36□□□□□ -0.59
Ldlr-202ENSMUST00000213114 Rlbp1Q9Z275 317 aa11.36□□□□□ -0.59
Ldlr-202ENSMUST00000213114 Tmem94Q7TSH8 1360 aa11.36□□□□□ -0.59
Ldlr-202ENSMUST00000213114 Kiaa1551Q5DTW7 1521 aa11.35□□□□□ -0.59
Ldlr-202ENSMUST00000213114 AU019823E9PUQ3 292 aa11.35□□□□□ -0.59
Ldlr-202ENSMUST00000213114 Bcar3Q9QZK2 820 aa11.35□□□□□ -0.59
Ldlr-202ENSMUST00000213114 PaskQ8CEE6 1383 aa11.35□□□□□ -0.59
Ldlr-202ENSMUST00000213114 Gnl3lQ6PGG6 577 aaKnown RBP11.35□□□□□ -0.59
Ldlr-202ENSMUST00000213114 Rsph6aQ8CDR2 708 aa11.35□□□□□ -0.59
Ldlr-202ENSMUST00000213114 FanclQ9CR14 375 aa11.35□□□□□ -0.59
Ldlr-202ENSMUST00000213114 SphkapQ6NSW3 1687 aa11.35□□□□□ -0.59
Ldlr-202ENSMUST00000213114 Prrc2bQ7TPM1 1486 aaKnown RBP11.34□□□□□ -0.59
Ldlr-202ENSMUST00000213114 Tbc1d32Q3URV1 1296 aa11.34□□□□□ -0.59
Ldlr-202ENSMUST00000213114 Chpf2Q3UU43 768 aa11.34□□□□□ -0.59
Ldlr-202ENSMUST00000213114 Tmem132eQ6IEE6 982 aa11.34□□□□□ -0.59
Ldlr-202ENSMUST00000213114 Ppip5k1A2ARP1 1436 aa11.34□□□□□ -0.59
Ldlr-202ENSMUST00000213114 Kdm2bQ6P1G2 1309 aa11.34□□□□□ -0.59
Ldlr-202ENSMUST00000213114 Kcnh5Q920E3 988 aa11.34□□□□□ -0.59
Ldlr-202ENSMUST00000213114 Pola1P33609 1465 aa11.34□□□□□ -0.59
Ldlr-202ENSMUST00000213114 PalldQ9ET54 1408 aa11.34□□□□□ -0.59
Ldlr-202ENSMUST00000213114 Mcm4P49717 862 aa11.34□□□□□ -0.59
Ldlr-202ENSMUST00000213114 Ppp1r3fQ9JIG4 799 aa11.34□□□□□ -0.59
Ldlr-202ENSMUST00000213114 Znf518aB2RRF6 1478 aaKnown RBP11.34□□□□□ -0.59
Ldlr-202ENSMUST00000213114 Ptch1Q61115 1434 aa11.34□□□□□ -0.59
Ldlr-202ENSMUST00000213114 Terf2O35144 541 aa11.34□□□□□ -0.59
Ldlr-202ENSMUST00000213114 Eif4a2P10630 407 aa11.34□□□□□ -0.59
Ldlr-202ENSMUST00000213114 Dhx16G3X8X0 1044 aaKnown RBP11.33□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Fam83gQ5SWY7 812 aa11.33□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Nphp4P59240 1425 aa11.33□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Cep170Q6A065 1588 aa11.33□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Fam13aQ8BGI4 693 aa11.33□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Top1mtQ8R4U6 593 aa11.33□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Rrp9Q91WM3 475 aaKnown RBP11.33□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Psma5Q9Z2U1 241 aaKnown RBP11.33□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Nkx1-2P42580 305 aa11.33□□□□□ -0.6
Ldlr-202ENSMUST00000213114 4930572O03RikQ8C5Y0 211 aa11.33□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Mast1Q9R1L5 1570 aa11.32□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Prim1P20664 417 aa11.32□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Cpa2Q504N0 417 aa11.32□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Trim27Q62158 513 aa11.32□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Ankrd50F7BE84 1390 aa11.32□□□□□ -0.6
Ldlr-202ENSMUST00000213114 PtprtQ99M80 1454 aa11.32□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Dnai2A2AC93 623 aa11.32□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Tpm3-rs7D3Z2H9 248 aa11.32□□□□□ -0.6
Ldlr-202ENSMUST00000213114 CrcpO35427 148 aa11.32□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 21.1 ms