RNA–Protein interactions for RNA: ENSMUST00000132214.7

Ccdc38-203, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc38, Length 2,222 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-203ENSMUST00000132214 Chmp4bQ9D8B3 224 aaKnown RBP8.53□□□□□ -1.04
Ccdc38-203ENSMUST00000132214 Kif27Q7M6Z4 1394 aa8.52□□□□□ -1.05
Ccdc38-203ENSMUST00000132214 Naip1Q9QWK5 1403 aa8.52□□□□□ -1.05
Ccdc38-203ENSMUST00000132214 ZxdbA2CE44 873 aa8.52□□□□□ -1.05
Ccdc38-203ENSMUST00000132214 Cdv3Q4VAA2 281 aaKnown RBP8.52□□□□□ -1.05
Ccdc38-203ENSMUST00000132214 SympkQ80X82 1284 aa8.52□□□□□ -1.05
Ccdc38-203ENSMUST00000132214 AdarQ99MU3 1178 aaKnown RBP8.52□□□□□ -1.05
Ccdc38-203ENSMUST00000132214 Neurl4Q5NCX5 1563 aa8.52□□□□□ -1.05
Ccdc38-203ENSMUST00000132214 Nrg2P56974 756 aa8.52□□□□□ -1.05
Ccdc38-203ENSMUST00000132214 Ppm1fQ8CGA0 452 aa8.52□□□□□ -1.05
Ccdc38-203ENSMUST00000132214 Cabp4Q8VHC5 271 aa8.52□□□□□ -1.05
Ccdc38-203ENSMUST00000132214 Large2Q5XPT3 690 aa8.51□□□□□ -1.05
Ccdc38-203ENSMUST00000132214 Dusp27Q148W8 1138 aa8.5□□□□□ -1.05
Ccdc38-203ENSMUST00000132214 Cers3Q1A3B0 383 aa8.5□□□□□ -1.05
Ccdc38-203ENSMUST00000132214 Usp48Q3V0C5 1052 aa8.5□□□□□ -1.05
Ccdc38-203ENSMUST00000132214 Mrgprb8Q7TN51 330 aa8.5□□□□□ -1.05
Ccdc38-203ENSMUST00000132214 Tmcc2Q80W04 706 aa8.5□□□□□ -1.05
Ccdc38-203ENSMUST00000132214 NpatQ8BMA5 1420 aa8.5□□□□□ -1.05
Ccdc38-203ENSMUST00000132214 Kiaa0556Q8C753 1610 aa8.49□□□□□ -1.05
Ccdc38-203ENSMUST00000132214 Qser1A2BIE1 1698 aa8.49□□□□□ -1.05
Ccdc38-203ENSMUST00000132214 Mettl16Q9CQG2 553 aaKnown RBP8.49□□□□□ -1.05
Ccdc38-203ENSMUST00000132214 Abca9Q8K449 1623 aa8.49□□□□□ -1.05
Ccdc38-203ENSMUST00000132214 ErmnQ5EBJ4 281 aa8.49□□□□□ -1.05
Ccdc38-203ENSMUST00000132214 Aebp1Q640N1 1128 aa8.49□□□□□ -1.05
Ccdc38-203ENSMUST00000132214 Trim32Q8CH72 655 aa8.49□□□□□ -1.05
Ccdc38-203ENSMUST00000132214 Arid4aF8VPQ2 1261 aaKnown RBP8.48□□□□□ -1.05
Ccdc38-203ENSMUST00000132214 Usp46P62069 366 aa8.48□□□□□ -1.05
Ccdc38-203ENSMUST00000132214 Rnf40Q3U319 1001 aa8.48□□□□□ -1.05
Ccdc38-203ENSMUST00000132214 Ipo9Q91YE6 1041 aa8.48□□□□□ -1.05
Ccdc38-203ENSMUST00000132214 Prpf40aQ9R1C7 953 aaKnown RBP8.48□□□□□ -1.05
Ccdc38-203ENSMUST00000132214 Prex2Q3LAC4 1598 aa8.48□□□□□ -1.05
Ccdc38-203ENSMUST00000132214 Atp10aO54827 1508 aa8.48□□□□□ -1.05
Ccdc38-203ENSMUST00000132214 Ccr5P51682 354 aa8.48□□□□□ -1.05
Ccdc38-203ENSMUST00000132214 Dhx57Q6P5D3 1388 aaKnown RBP8.48□□□□□ -1.05
Ccdc38-203ENSMUST00000132214 Zc3h4Q6ZPZ3 1304 aaKnown RBP8.48□□□□□ -1.05
Ccdc38-203ENSMUST00000132214 OvosQ3UU35 1456 aa8.47□□□□□ -1.05
Ccdc38-203ENSMUST00000132214 Mdm2P23804 489 aa8.47□□□□□ -1.05
Ccdc38-203ENSMUST00000132214 Gpatch11Q3UFS4 262 aa8.47□□□□□ -1.05
Ccdc38-203ENSMUST00000132214 Tigd5Q499M4 642 aa8.47□□□□□ -1.05
Ccdc38-203ENSMUST00000132214 Bms1Q6PGF5 1284 aaKnown RBP8.47□□□□□ -1.05
Ccdc38-203ENSMUST00000132214 Plpp7Q91WB2 271 aa8.47□□□□□ -1.05
Ccdc38-203ENSMUST00000132214 Adamtsl3G3UXC7 1706 aa8.47□□□□□ -1.05
Ccdc38-203ENSMUST00000132214 CntlnA2AM05 1397 aa8.46□□□□□ -1.05
Ccdc38-203ENSMUST00000132214 Gm21698A0A087WQP8 267 aa8.46□□□□□ -1.05
Ccdc38-203ENSMUST00000132214 SowahcQ8C0J6 512 aa8.46□□□□□ -1.05
Ccdc38-203ENSMUST00000132214 Ahdc1Q6PAL7 1594 aaKnown RBP8.46□□□□□ -1.05
Ccdc38-203ENSMUST00000132214 Ttll13A4Q9F6 804 aa8.46□□□□□ -1.06
Ccdc38-203ENSMUST00000132214 Mtmr1Q9Z2C4 669 aa8.46□□□□□ -1.06
Ccdc38-203ENSMUST00000132214 Hsd3b3P26150 373 aa8.45□□□□□ -1.06
Ccdc38-203ENSMUST00000132214 Rint1Q8BZ36 792 aa8.45□□□□□ -1.06
Ccdc38-203ENSMUST00000132214 Podxl2Q8CAE9 603 aa8.45□□□□□ -1.06
Ccdc38-203ENSMUST00000132214 Peg3Q3URU2 1571 aa8.45□□□□□ -1.06
Ccdc38-203ENSMUST00000132214 Yeats2Q3TUF7 1407 aa8.45□□□□□ -1.06
Ccdc38-203ENSMUST00000132214 SphkapQ6NSW3 1687 aa8.45□□□□□ -1.06
Ccdc38-203ENSMUST00000132214 Stra8P70278 393 aa8.45□□□□□ -1.06
Ccdc38-203ENSMUST00000132214 Zmym4A2A791 1549 aaKnown RBP8.44□□□□□ -1.06
Ccdc38-203ENSMUST00000132214 Dph2Q9CR25 489 aa8.44□□□□□ -1.06
Ccdc38-203ENSMUST00000132214 NbnQ9R207 751 aa8.44□□□□□ -1.06
Ccdc38-203ENSMUST00000132214 Znf428Q8C1M2 176 aa8.44□□□□□ -1.06
Ccdc38-203ENSMUST00000132214 Wdr44Q6NVE8 915 aa8.43□□□□□ -1.06
Ccdc38-203ENSMUST00000132214 Tmem164Q6PHN7 296 aa8.43□□□□□ -1.06
Ccdc38-203ENSMUST00000132214 Fam181bQ80VF6 417 aa8.43□□□□□ -1.06
Ccdc38-203ENSMUST00000132214 Ptch1Q61115 1434 aa8.42□□□□□ -1.06
Ccdc38-203ENSMUST00000132214 Sparcl1P70663 650 aa8.42□□□□□ -1.06
Ccdc38-203ENSMUST00000132214 Kif20aP97329 887 aa8.42□□□□□ -1.06
Ccdc38-203ENSMUST00000132214 Calr4Q3TQS0 420 aa8.42□□□□□ -1.06
Ccdc38-203ENSMUST00000132214 Rbm26Q6NZN0 1012 aaKnown RBP8.42□□□□□ -1.06
Ccdc38-203ENSMUST00000132214 Fhod1Q6P9Q4 1197 aa8.42□□□□□ -1.06
Ccdc38-203ENSMUST00000132214 Gtf2ird1Q9JI57 1104 aaKnown RBP8.42□□□□□ -1.06
Ccdc38-203ENSMUST00000132214 Arhgap5P97393 1501 aa8.42□□□□□ -1.06
Ccdc38-203ENSMUST00000132214 Puf60Q3UEB3 564 aaKnown RBP8.42□□□□□ -1.06
Ccdc38-203ENSMUST00000132214 Ncoa3O09000 1398 aa8.42□□□□□ -1.06
Ccdc38-203ENSMUST00000132214 Fam208aQ69ZR9 1610 aaKnown RBP8.41□□□□□ -1.06
Ccdc38-203ENSMUST00000132214 Catsper2A2ARP9 588 aa8.41□□□□□ -1.06
Ccdc38-203ENSMUST00000132214 Znf692Q3U381 531 aa8.41□□□□□ -1.06
Ccdc38-203ENSMUST00000132214 Washc4Q3UMB9 1173 aa8.41□□□□□ -1.06
Ccdc38-203ENSMUST00000132214 Rtn1Q8K0T0 780 aa8.41□□□□□ -1.06
Ccdc38-203ENSMUST00000132214 Dip2cE9PWR4 1557 aa8.41□□□□□ -1.06
Ccdc38-203ENSMUST00000132214 Fmr1nbQ80ZA7 238 aa8.41□□□□□ -1.06
Ccdc38-203ENSMUST00000132214 Kcnc4Q8R1C0 628 aa8.41□□□□□ -1.06
Ccdc38-203ENSMUST00000132214 Trim33Q99PP7 1142 aa8.41□□□□□ -1.06
Ccdc38-203ENSMUST00000132214 Fam50aQ9WV03 339 aaKnown RBP8.41□□□□□ -1.06
Ccdc38-203ENSMUST00000132214 TonslQ6NZL6 1363 aa8.41□□□□□ -1.06
Ccdc38-203ENSMUST00000132214 Mug1P28665 1476 aa8.4□□□□□ -1.06
Ccdc38-203ENSMUST00000132214 VdrP48281 422 aa8.4□□□□□ -1.06
Ccdc38-203ENSMUST00000132214 SpidrQ8BGX7 933 aa8.4□□□□□ -1.06
Ccdc38-203ENSMUST00000132214 MypopQ8R4U1 393 aa8.4□□□□□ -1.06
Ccdc38-203ENSMUST00000132214 Gm1043A0A140LJC2 1431 aa8.4□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 Washc2Q6PGL7 1334 aa8.4□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 Tnnt2P50752 301 aa8.39□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 Sec1P97353 368 aa8.39□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 MetrnQ8C1Q4 291 aa8.39□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 CgasQ8C6L5 507 aa8.39□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 Znf467Q8JZL0 594 aa8.39□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 GneQ91WG8 722 aaKnown RBP8.39□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 SetQ9EQU5 289 aaKnown RBP8.39□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 Gdpd2Q9ESM6 539 aa8.39□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 Supt6hQ62383 1726 aaKnown RBP8.39□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 Talpid3E9PV87 1520 aa8.39□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 Kdm5cP41230 1554 aa8.39□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 63 ms