RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Ppp6r1Q7TSI3 856 aa16.47■□□□□ 0.23
Col3a1-201ENSMUST00000087883 TbcaP48428 108 aaKnown RBP16.47■□□□□ 0.23
Col3a1-201ENSMUST00000087883 Ehmt1Q5DW34 1296 aa16.47■□□□□ 0.23
Col3a1-201ENSMUST00000087883 Dnaaf4Q8R368 420 aa16.47■□□□□ 0.23
Col3a1-201ENSMUST00000087883 Ccdc83Q9D4V3 305 aa16.47■□□□□ 0.23
Col3a1-201ENSMUST00000087883 Top2aQ01320 1528 aaKnown RBP16.46■□□□□ 0.23
Col3a1-201ENSMUST00000087883 Zpr1Q62384 459 aa16.46■□□□□ 0.23
Col3a1-201ENSMUST00000087883 Jakmip2D3YXK0 820 aa16.45■□□□□ 0.22
Col3a1-201ENSMUST00000087883 Top1mtQ8R4U6 593 aa16.45■□□□□ 0.22
Col3a1-201ENSMUST00000087883 Ppip5k2Q6ZQB6 1129 aa16.45■□□□□ 0.22
Col3a1-201ENSMUST00000087883 Trim25Q61510 634 aaKnown RBP16.45■□□□□ 0.22
Col3a1-201ENSMUST00000087883 Cdc37l1Q9CZP7 335 aa16.44■□□□□ 0.22
Col3a1-201ENSMUST00000087883 TxlnbQ8VBT1 685 aa16.44■□□□□ 0.22
Col3a1-201ENSMUST00000087883 Rhot2Q8JZN7 620 aa16.44■□□□□ 0.22
Col3a1-201ENSMUST00000087883 Pafah1b1P63005 410 aaKnown RBP16.43■□□□□ 0.22
Col3a1-201ENSMUST00000087883 MvpQ9EQK5 861 aa16.43■□□□□ 0.22
Col3a1-201ENSMUST00000087883 Cfap45Q9D9U9 551 aa16.43■□□□□ 0.22
Col3a1-201ENSMUST00000087883 Myom3A2ABU4 1439 aa16.43■□□□□ 0.22
Col3a1-201ENSMUST00000087883 Prl7d1P04769 244 aa16.43■□□□□ 0.22
Col3a1-201ENSMUST00000087883 Ptpdc1Q6NZK8 747 aa16.43■□□□□ 0.22
Col3a1-201ENSMUST00000087883 Lrrc45Q8CIM1 670 aa16.43■□□□□ 0.22
Col3a1-201ENSMUST00000087883 Plekhg5Q66T02 1073 aa16.43■□□□□ 0.22
Col3a1-201ENSMUST00000087883 Stard3nlQ9DCI3 235 aa16.42■□□□□ 0.22
Col3a1-201ENSMUST00000087883 Cd109Q8R422 1442 aa16.42■□□□□ 0.22
Col3a1-201ENSMUST00000087883 Ercc6lQ8BHK9 1240 aa16.42■□□□□ 0.22
Col3a1-201ENSMUST00000087883 Wdr33Q8K4P0 1330 aaKnown RBP16.42■□□□□ 0.22
Col3a1-201ENSMUST00000087883 Mcm4P49717 862 aa16.41■□□□□ 0.22
Col3a1-201ENSMUST00000087883 Rcan3Q9JKK0 239 aa16.41■□□□□ 0.22
Col3a1-201ENSMUST00000087883 PsapQ61207 557 aaKnown RBP16.41■□□□□ 0.22
Col3a1-201ENSMUST00000087883 Tspyl2Q7TQI8 677 aa16.41■□□□□ 0.22
Col3a1-201ENSMUST00000087883 Jph4Q80WT0 628 aa16.41■□□□□ 0.22
Col3a1-201ENSMUST00000087883 Adck5Q80V03 582 aa16.41■□□□□ 0.22
Col3a1-201ENSMUST00000087883 Pms1Q8K119 917 aa16.41■□□□□ 0.22
Col3a1-201ENSMUST00000087883 Gm42641I6L9G2 585 aa16.41■□□□□ 0.22
Col3a1-201ENSMUST00000087883 Arglu1Q3UL36 271 aaKnown RBP16.41■□□□□ 0.22
Col3a1-201ENSMUST00000087883 Cdkl5Q3UTQ8 938 aa16.41■□□□□ 0.22
Col3a1-201ENSMUST00000087883 Smg7Q5RJH6 1138 aaKnown RBP16.41■□□□□ 0.22
Col3a1-201ENSMUST00000087883 AtripQ8BMG1 785 aa16.41■□□□□ 0.22
Col3a1-201ENSMUST00000087883 ImpactO55091 318 aa16.4■□□□□ 0.22
Col3a1-201ENSMUST00000087883 Maco1Q7TQE6 664 aaKnown RBP16.4■□□□□ 0.22
Col3a1-201ENSMUST00000087883 Zranb3Q6NZP1 1069 aa16.4■□□□□ 0.22
Col3a1-201ENSMUST00000087883 Ssr1Q9CY50 286 aaKnown RBP16.4■□□□□ 0.22
Col3a1-201ENSMUST00000087883 Cyp26c1B2RXA7 518 aa16.4■□□□□ 0.22
Col3a1-201ENSMUST00000087883 Kdm4aQ8BW72 1064 aa16.4■□□□□ 0.22
Col3a1-201ENSMUST00000087883 Hvcn1Q3U2S8 269 aa16.4■□□□□ 0.22
Col3a1-201ENSMUST00000087883 Mipol1Q9D9F8 279 aa16.4■□□□□ 0.22
Col3a1-201ENSMUST00000087883 Zscan20B2KFW1 1030 aa16.39■□□□□ 0.21
Col3a1-201ENSMUST00000087883 Fsd2Q8BZ52 692 aa16.39■□□□□ 0.21
Col3a1-201ENSMUST00000087883 Spty2d1Q68FG3 682 aa16.39■□□□□ 0.21
Col3a1-201ENSMUST00000087883 Rufy2Q8R4C2 606 aa16.39■□□□□ 0.21
Col3a1-201ENSMUST00000087883 Dydc1Q9D9T0 175 aa16.39■□□□□ 0.21
Col3a1-201ENSMUST00000087883 Exoc6bA6H5Z3 810 aa16.38■□□□□ 0.21
Col3a1-201ENSMUST00000087883 Gm7361D3Z6R1 267 aa16.38■□□□□ 0.21
Col3a1-201ENSMUST00000087883 Dnajc2P54103 621 aaKnown RBP16.38■□□□□ 0.21
Col3a1-201ENSMUST00000087883 Gigyf1Q99MR1 1044 aaKnown RBP16.38■□□□□ 0.21
Col3a1-201ENSMUST00000087883 IkQ9Z1M8 557 aaKnown RBP16.38■□□□□ 0.21
Col3a1-201ENSMUST00000087883 Irgm2A0A140LIF8 407 aa16.38■□□□□ 0.21
Col3a1-201ENSMUST00000087883 Cavin1O54724 392 aa16.38■□□□□ 0.21
Col3a1-201ENSMUST00000087883 Pof1bQ8K4L4 587 aa16.38■□□□□ 0.21
Col3a1-201ENSMUST00000087883 Prdm16A2A935 1275 aa16.38■□□□□ 0.21
Col3a1-201ENSMUST00000087883 Iqca1Q9CUL5 857 aa16.38■□□□□ 0.21
Col3a1-201ENSMUST00000087883 Map3k13Q1HKZ5 959 aa16.37■□□□□ 0.21
Col3a1-201ENSMUST00000087883 DmtnQ9WV69 405 aa16.37■□□□□ 0.21
Col3a1-201ENSMUST00000087883 Lmbr1Q9JIT0 490 aa16.37■□□□□ 0.21
Col3a1-201ENSMUST00000087883 L3mbtl2P59178 703 aa16.37■□□□□ 0.21
Col3a1-201ENSMUST00000087883 Fam13aQ8BGI4 693 aa16.37■□□□□ 0.21
Col3a1-201ENSMUST00000087883 Soga1E1U8D0 1418 aa16.37■□□□□ 0.21
Col3a1-201ENSMUST00000087883 Mcm3P25206 812 aaKnown RBP16.37■□□□□ 0.21
Col3a1-201ENSMUST00000087883 Rbm5Q91YE7 815 aaKnown RBP16.37■□□□□ 0.21
Col3a1-201ENSMUST00000087883 Ggnbp2Q5SV77 696 aa16.37■□□□□ 0.21
Col3a1-201ENSMUST00000087883 Pde1cQ64338 706 aa16.37■□□□□ 0.21
Col3a1-201ENSMUST00000087883 PalmQ9Z0P4 383 aa16.37■□□□□ 0.21
Col3a1-201ENSMUST00000087883 Shroom4Q1W617 1475 aa16.36■□□□□ 0.21
Col3a1-201ENSMUST00000087883 Sirt1Q923E4 737 aa16.36■□□□□ 0.21
Col3a1-201ENSMUST00000087883 Ncapd3Q6ZQK0 1506 aa16.36■□□□□ 0.21
Col3a1-201ENSMUST00000087883 Uri1Q3TLD5 531 aa16.36■□□□□ 0.21
Col3a1-201ENSMUST00000087883 Exoc8Q6PGF7 716 aa16.36■□□□□ 0.21
Col3a1-201ENSMUST00000087883 Tspyl3Q3UYP3 334 aa16.36■□□□□ 0.21
Col3a1-201ENSMUST00000087883 SrrtQ99MR6 875 aaKnown RBP16.36■□□□□ 0.21
Col3a1-201ENSMUST00000087883 Ccdc39Q9D5Y1 937 aa16.36■□□□□ 0.21
Col3a1-201ENSMUST00000087883 Mex3cQ05A36 652 aaKnown RBP16.35■□□□□ 0.21
Col3a1-201ENSMUST00000087883 AcrbpQ3V140 540 aa16.35■□□□□ 0.21
Col3a1-201ENSMUST00000087883 TxlnaQ6PAM1 554 aaKnown RBP16.35■□□□□ 0.21
Col3a1-201ENSMUST00000087883 Jade2Q6ZQF7 829 aa16.35■□□□□ 0.21
Col3a1-201ENSMUST00000087883 Gas2l3Q3UWW6 683 aa16.35■□□□□ 0.21
Col3a1-201ENSMUST00000087883 Brf1Q8CFK2 676 aa16.35■□□□□ 0.21
Col3a1-201ENSMUST00000087883 Krt84Q99M73 603 aa16.35■□□□□ 0.21
Col3a1-201ENSMUST00000087883 Hoxa7P02830 229 aa16.34■□□□□ 0.21
Col3a1-201ENSMUST00000087883 Nol7Q9D7Z3 254 aaKnown RBP16.34■□□□□ 0.21
Col3a1-201ENSMUST00000087883 Zbtb22Q9Z0G7 638 aa16.34■□□□□ 0.21
Col3a1-201ENSMUST00000087883 Gjb2Q00977 226 aa16.34■□□□□ 0.21
Col3a1-201ENSMUST00000087883 Maats1Q8BRC6 783 aa16.34■□□□□ 0.21
Col3a1-201ENSMUST00000087883 Smarca5Q91ZW3 1051 aaKnown RBP16.34■□□□□ 0.21
Col3a1-201ENSMUST00000087883 Gm21671G3UY31 267 aa16.34■□□□□ 0.21
Col3a1-201ENSMUST00000087883 Kcnj4P52189 445 aa16.34■□□□□ 0.21
Col3a1-201ENSMUST00000087883 Fchsd2Q3USJ8 740 aa16.33■□□□□ 0.2
Col3a1-201ENSMUST00000087883 Dhx9O70133 1380 aaKnown RBP16.33■□□□□ 0.2
Col3a1-201ENSMUST00000087883 Larp1bA0A0A6YXJ7 370 aaKnown RBP16.33■□□□□ 0.2
Col3a1-201ENSMUST00000087883 Wasf1Q8R5H6 559 aa16.33■□□□□ 0.2
Col3a1-201ENSMUST00000087883 Naip1Q9QWK5 1403 aa16.33■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 94.3 ms