RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 KCNK9Q9NPC2 374 aa17.73■□□□□ 0.43
PHGDH-232ENST00000641947 IARS2Q9NSE4 1012 aaKnown RBP17.73■□□□□ 0.43
PHGDH-232ENST00000641947 HAUS2Q9NVX0 235 aa17.73■□□□□ 0.43
PHGDH-232ENST00000641947 GGT7Q9UJ14 662 aa17.73■□□□□ 0.43
PHGDH-232ENST00000641947 HEATR9A2RTY3 570 aa17.72■□□□□ 0.43
PHGDH-232ENST00000641947 HEPACAM2A8MVW5 462 aa17.72■□□□□ 0.43
PHGDH-232ENST00000641947 CCL22O00626 93 aa17.72■□□□□ 0.43
PHGDH-232ENST00000641947 SLC9A3R1O14745 358 aaPredicted RBP17.72■□□□□ 0.43
PHGDH-232ENST00000641947 TYROBPO43914 113 aa17.72■□□□□ 0.43
PHGDH-232ENST00000641947 RFPL1O75677 317 aa17.72■□□□□ 0.43
PHGDH-232ENST00000641947 GKP32189 559 aa17.72■□□□□ 0.43
PHGDH-232ENST00000641947 ABCG1P45844 678 aa17.72■□□□□ 0.43
PHGDH-232ENST00000641947 MESP2Q0VG99 397 aa17.72■□□□□ 0.43
PHGDH-232ENST00000641947 NAB1Q13506 487 aa17.72■□□□□ 0.43
PHGDH-232ENST00000641947 GEN1Q17RS7 908 aa17.72■□□□□ 0.43
PHGDH-232ENST00000641947 GAB4Q2WGN9 574 aa17.72■□□□□ 0.43
PHGDH-232ENST00000641947 TSTD2Q5T7W7 516 aa17.72■□□□□ 0.43
PHGDH-232ENST00000641947 MROH9Q5TGP6 573 aa17.72■□□□□ 0.43
PHGDH-232ENST00000641947 TANGO2Q6ICL3 276 aa17.72■□□□□ 0.43
PHGDH-232ENST00000641947 ANKRD42Q8N9B4 389 aa17.72■□□□□ 0.43
PHGDH-232ENST00000641947 MGARPQ8TDB4 240 aa17.72■□□□□ 0.43
PHGDH-232ENST00000641947 CDKL2Q92772 493 aa17.72■□□□□ 0.43
PHGDH-232ENST00000641947 MCMBPQ9BTE3 642 aa17.72■□□□□ 0.43
PHGDH-232ENST00000641947 S1PR5Q9H228 398 aa17.72■□□□□ 0.43
PHGDH-232ENST00000641947 TRPV4Q9HBA0 871 aa17.72■□□□□ 0.43
PHGDH-232ENST00000641947 GDE1Q9NZC3 331 aa17.72■□□□□ 0.43
PHGDH-232ENST00000641947 FBXO10Q9UK96 956 aa17.72■□□□□ 0.43
PHGDH-232ENST00000641947 HS3ST2Q9Y278 367 aa17.72■□□□□ 0.43
PHGDH-232ENST00000641947 AURKAO14965 403 aa17.71■□□□□ 0.43
PHGDH-232ENST00000641947 VAPBO95292 243 aa17.71■□□□□ 0.43
PHGDH-232ENST00000641947 ADH5P11766 374 aa17.71■□□□□ 0.43
PHGDH-232ENST00000641947 CES1P23141 567 aa17.71■□□□□ 0.43
PHGDH-232ENST00000641947 PTPRCAPQ14761 206 aa17.71■□□□□ 0.43
PHGDH-232ENST00000641947 LRRC14Q15048 493 aa17.71■□□□□ 0.43
PHGDH-232ENST00000641947 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.71■□□□□ 0.43
PHGDH-232ENST00000641947 LPCAT1Q8NF37 534 aa17.71■□□□□ 0.43
PHGDH-232ENST00000641947 BLOC1S5Q8TDH9 187 aa17.71■□□□□ 0.43
PHGDH-232ENST00000641947 MYADMQ96S97 322 aa17.71■□□□□ 0.43
PHGDH-232ENST00000641947 EBF3Q9H4W6 596 aa17.71■□□□□ 0.43
PHGDH-232ENST00000641947 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.71■□□□□ 0.43
PHGDH-232ENST00000641947 SENP1Q9P0U3 644 aa17.71■□□□□ 0.43
PHGDH-232ENST00000641947 EVLQ9UI08 416 aaPredicted RBP17.71■□□□□ 0.43
PHGDH-232ENST00000641947 ARL5AQ9Y689 179 aa17.71■□□□□ 0.43
PHGDH-232ENST00000641947 TCF20Q9UGU0 1960 aaKnown RBP17.71■□□□□ 0.43
PHGDH-232ENST00000641947 TRIOBPQ9H2D6 2365 aa17.71■□□□□ 0.43
PHGDH-232ENST00000641947 PRPF4O43172 522 aaKnown RBP eCLIP17.71■□□□□ 0.433e-6■■■■□ 19.9
PHGDH-232ENST00000641947 BUD23O43709 281 aaKnown RBP17.71■□□□□ 0.43
PHGDH-232ENST00000641947 FZD6O60353 706 aa17.71■□□□□ 0.43
PHGDH-232ENST00000641947 PIGNO95427 931 aa17.71■□□□□ 0.43
PHGDH-232ENST00000641947 SNRPAP09012 282 aaKnown RBP17.71■□□□□ 0.43
PHGDH-232ENST00000641947 CISD3P0C7P0 127 aa17.71■□□□□ 0.43
PHGDH-232ENST00000641947 LSP1P33241 339 aa17.71■□□□□ 0.43
PHGDH-232ENST00000641947 ARSDP51689 593 aa17.71■□□□□ 0.43
PHGDH-232ENST00000641947 PDPK2PQ6A1A2 396 aa17.71■□□□□ 0.43
PHGDH-232ENST00000641947 KIAA0930Q6ICG6 404 aaPredicted RBP17.71■□□□□ 0.43
PHGDH-232ENST00000641947 VITQ6UXI7 678 aa17.71■□□□□ 0.43
PHGDH-232ENST00000641947 BANPQ8N9N5 519 aa17.71■□□□□ 0.43
PHGDH-232ENST00000641947 SORCS1Q8WY21 1168 aa17.71■□□□□ 0.43
PHGDH-232ENST00000641947 SMC6Q96SB8 1091 aa17.71■□□□□ 0.43
PHGDH-232ENST00000641947 ZNF106Q9H2Y7 1883 aaKnown RBP17.71■□□□□ 0.43
PHGDH-232ENST00000641947 TTYH1Q9H313 450 aaPredicted RBP17.71■□□□□ 0.43
PHGDH-232ENST00000641947 C12orf65Q9H3J6 166 aaKnown RBP17.71■□□□□ 0.43
PHGDH-232ENST00000641947 SLCO3A1Q9UIG8 710 aa17.71■□□□□ 0.43
PHGDH-232ENST00000641947 HOXC11O43248 304 aaPredicted RBP17.7■□□□□ 0.42
PHGDH-232ENST00000641947 KRT37O76014 449 aa17.7■□□□□ 0.42
PHGDH-232ENST00000641947 MT-ND3P03897 115 aa17.7■□□□□ 0.42
PHGDH-232ENST00000641947 PYGBP11216 843 aa17.7■□□□□ 0.42
PHGDH-232ENST00000641947 GABRB3P28472 473 aa17.7■□□□□ 0.42
PHGDH-232ENST00000641947 SLC8A1P32418 973 aa17.7■□□□□ 0.42
PHGDH-232ENST00000641947 RPA3P35244 121 aaPredicted RBP17.7■□□□□ 0.42
PHGDH-232ENST00000641947 GP5P40197 560 aa17.7■□□□□ 0.42
PHGDH-232ENST00000641947 SERPINB9P50453 376 aa17.7■□□□□ 0.42
PHGDH-232ENST00000641947 WDR4P57081 412 aaKnown RBP17.7■□□□□ 0.42
PHGDH-232ENST00000641947 SLC18A2Q05940 514 aa17.7■□□□□ 0.42
PHGDH-232ENST00000641947 C22orf39Q6P5X5 142 aa17.7■□□□□ 0.42
PHGDH-232ENST00000641947 STRA8Q7Z7C7 330 aa17.7■□□□□ 0.42
PHGDH-232ENST00000641947 CAMK1DQ8IU85 385 aa17.7■□□□□ 0.42
PHGDH-232ENST00000641947 DENND6AQ8IWF6 608 aa17.7■□□□□ 0.42
PHGDH-232ENST00000641947 KIAA1958Q8N8K9 716 aa17.7■□□□□ 0.42
PHGDH-232ENST00000641947 PNPLA1Q8N8W4 532 aa17.7■□□□□ 0.42
PHGDH-232ENST00000641947 MDGA1Q8NFP4 955 aa17.7■□□□□ 0.42
PHGDH-232ENST00000641947 DENND1AQ8TEH3 1009 aa17.7■□□□□ 0.42
PHGDH-232ENST00000641947 PDCD6IPQ8WUM4 868 aaKnown RBP17.7■□□□□ 0.42
PHGDH-232ENST00000641947 RBBP8Q99708 897 aa17.7■□□□□ 0.42
PHGDH-232ENST00000641947 CPNE1Q99829 537 aa17.7■□□□□ 0.42
PHGDH-232ENST00000641947 FAM83CQ9BQN1 747 aa17.7■□□□□ 0.42
PHGDH-232ENST00000641947 PLA2G2FQ9BZM2 168 aa17.7■□□□□ 0.42
PHGDH-232ENST00000641947 HPS4Q9NQG7 708 aa17.7■□□□□ 0.42
PHGDH-232ENST00000641947 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.7■□□□□ 0.422e-10■□□□□ 9.2
PHGDH-232ENST00000641947 CDH7Q9ULB5 785 aa17.7■□□□□ 0.42
PHGDH-232ENST00000641947 ARIH1Q9Y4X5 557 aaPredicted RBP17.7■□□□□ 0.42
PHGDH-232ENST00000641947 A0A0U1RQS6 177 aa17.69■□□□□ 0.42
PHGDH-232ENST00000641947 FAM47DPA6NHR8 397 aa17.69■□□□□ 0.42
PHGDH-232ENST00000641947 KRT38O76015 456 aa17.69■□□□□ 0.42
PHGDH-232ENST00000641947 PAPSS2O95340 614 aaPredicted RBP17.69■□□□□ 0.42
PHGDH-232ENST00000641947 ALDOAP04075 364 aaKnown RBP17.69■□□□□ 0.42
PHGDH-232ENST00000641947 ITGA2BP08514 1039 aa17.69■□□□□ 0.42
PHGDH-232ENST00000641947 ALADP13716 330 aa17.69■□□□□ 0.42
PHGDH-232ENST00000641947 SP100P23497 879 aaPredicted RBP17.69■□□□□ 0.42
PHGDH-232ENST00000641947 LTBRP36941 435 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms