RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 DRG1Q9Y295 367 aaKnown RBP9.54□□□□□ -0.88
PHGDH-228ENST00000641847 PI4KAP42356 2102 aa9.53□□□□□ -0.88
PHGDH-228ENST00000641847 MUC22E2RYF6 1773 aaPredicted RBP9.53□□□□□ -0.88
PHGDH-228ENST00000641847 FAM187AA6NFU0 413 aa9.53□□□□□ -0.88
PHGDH-228ENST00000641847 EFCAB8A8MWE9 144 aa9.53□□□□□ -0.88
PHGDH-228ENST00000641847 MATN3O15232 486 aa9.53□□□□□ -0.88
PHGDH-228ENST00000641847 MTSS1O43312 755 aa9.53□□□□□ -0.88
PHGDH-228ENST00000641847 ZMPSTE24O75844 475 aa9.53□□□□□ -0.88
PHGDH-228ENST00000641847 STK10O94804 968 aaKnown RBP9.53□□□□□ -0.88
PHGDH-228ENST00000641847 CER1O95813 267 aa9.53□□□□□ -0.88
PHGDH-228ENST00000641847 PEX11BO96011 259 aa9.53□□□□□ -0.88
PHGDH-228ENST00000641847 CISD3P0C7P0 127 aa9.53□□□□□ -0.88
PHGDH-228ENST00000641847 ZSCAN5DPP0CG00 497 aa9.53□□□□□ -0.88
PHGDH-228ENST00000641847 HLA-EP13747 358 aa9.53□□□□□ -0.88
PHGDH-228ENST00000641847 ETS1P14921 441 aa9.53□□□□□ -0.88
PHGDH-228ENST00000641847 PTPN3P26045 913 aa9.53□□□□□ -0.88
PHGDH-228ENST00000641847 OPRD1P41143 372 aa9.53□□□□□ -0.88
PHGDH-228ENST00000641847 EIF2DP41214 584 aaKnown RBP9.53□□□□□ -0.88
PHGDH-228ENST00000641847 TNFRSF4P43489 277 aa9.53□□□□□ -0.88
PHGDH-228ENST00000641847 VPS41P49754 854 aa9.53□□□□□ -0.88
PHGDH-228ENST00000641847 PLK1P53350 603 aa9.53□□□□□ -0.88
PHGDH-228ENST00000641847 KCNC4Q03721 635 aa9.53□□□□□ -0.88
PHGDH-228ENST00000641847 WASHC5Q12768 1159 aa9.53□□□□□ -0.88
PHGDH-228ENST00000641847 PTK6Q13882 451 aa9.53□□□□□ -0.88
PHGDH-228ENST00000641847 ZNF235Q14590 738 aa9.53□□□□□ -0.88
PHGDH-228ENST00000641847 SUZ12Q15022 739 aaKnown RBP9.53□□□□□ -0.88
PHGDH-228ENST00000641847 PPP1R7Q15435 360 aa9.53□□□□□ -0.88
PHGDH-228ENST00000641847 TRIP13Q15645 432 aaPredicted RBP9.53□□□□□ -0.88
PHGDH-228ENST00000641847 FAM182AQ5T1J6 154 aa9.53□□□□□ -0.88
PHGDH-228ENST00000641847 TMCO4Q5TGY1 634 aa9.53□□□□□ -0.88
PHGDH-228ENST00000641847 MBLAC2Q68D91 279 aa9.53□□□□□ -0.88
PHGDH-228ENST00000641847 CCDC70Q6NSX1 233 aa9.53□□□□□ -0.88
PHGDH-228ENST00000641847 IL27RAQ6UWB1 636 aa9.53□□□□□ -0.88
PHGDH-228ENST00000641847 LINGO4Q6UY18 593 aa9.53□□□□□ -0.88
PHGDH-228ENST00000641847 SYDE1Q6ZW31 735 aaPredicted RBP9.53□□□□□ -0.88
PHGDH-228ENST00000641847 MAATS1Q7Z4T9 603 aa9.53□□□□□ -0.88
PHGDH-228ENST00000641847 KIAA0907Q7Z7F0 614 aaPredicted RBP9.53□□□□□ -0.88
PHGDH-228ENST00000641847 SLCO6A1Q86UG4 719 aa9.53□□□□□ -0.88
PHGDH-228ENST00000641847 ADIPOR2Q86V24 386 aa9.53□□□□□ -0.88
PHGDH-228ENST00000641847 PHTF2Q8N3S3 785 aa9.53□□□□□ -0.88
PHGDH-228ENST00000641847 DEFB119Q8N690 84 aa9.53□□□□□ -0.88
PHGDH-228ENST00000641847 TERB1Q8NA31 727 aa9.53□□□□□ -0.88
PHGDH-228ENST00000641847 IL17RCQ8NAC3 791 aa9.53□□□□□ -0.88
PHGDH-228ENST00000641847 GLIS1Q8NBF1 620 aa9.53□□□□□ -0.88
PHGDH-228ENST00000641847 CCDC110Q8TBZ0 833 aa9.53□□□□□ -0.88
PHGDH-228ENST00000641847 KCNV2Q8TDN2 545 aa9.53□□□□□ -0.88
PHGDH-228ENST00000641847 MAML1Q92585 1016 aa9.53□□□□□ -0.88
PHGDH-228ENST00000641847 FOXJ1Q92949 421 aa9.53□□□□□ -0.88
PHGDH-228ENST00000641847 FATE1Q969F0 183 aa9.53□□□□□ -0.88
PHGDH-228ENST00000641847 RTP4Q96DX8 246 aa9.53□□□□□ -0.88
PHGDH-228ENST00000641847 HSPA12BQ96MM6 686 aa9.53□□□□□ -0.88
PHGDH-228ENST00000641847 ZNF599Q96NL3 588 aa9.53□□□□□ -0.88
PHGDH-228ENST00000641847 TRIM51Q9BSJ1 452 aa9.53□□□□□ -0.88
PHGDH-228ENST00000641847 LRRC1Q9BTT6 524 aa9.53□□□□□ -0.88
PHGDH-228ENST00000641847 CINPQ9BW66 212 aaPredicted RBP9.53□□□□□ -0.88
PHGDH-228ENST00000641847 PCDH9Q9HC56 1237 aa9.53□□□□□ -0.88
PHGDH-228ENST00000641847 KLHL8Q9P2G9 620 aaPredicted RBP9.53□□□□□ -0.88
PHGDH-228ENST00000641847 UBA2Q9UBT2 640 aaPredicted RBP9.53□□□□□ -0.88
PHGDH-228ENST00000641847 FEZ2Q9UHY8 353 aaPredicted RBP9.53□□□□□ -0.88
PHGDH-228ENST00000641847 INTS6Q9UL03 887 aaKnown RBP9.53□□□□□ -0.88
PHGDH-228ENST00000641847 SLC27A6Q9Y2P4 619 aa9.53□□□□□ -0.88
PHGDH-228ENST00000641847 MGAQ8IWI9 3026 aa9.53□□□□□ -0.88
PHGDH-228ENST00000641847 A0A0A0MRY4 1105 aa9.52□□□□□ -0.89
PHGDH-228ENST00000641847 TEX51A0A1B0GUA7 166 aa9.52□□□□□ -0.89
PHGDH-228ENST00000641847 C5orf60A6NFR6 353 aa9.52□□□□□ -0.89
PHGDH-228ENST00000641847 ZSCAN5CA6NGD5 496 aaPredicted RBP9.52□□□□□ -0.89
PHGDH-228ENST00000641847 GCATO75600 419 aa9.52□□□□□ -0.89
PHGDH-228ENST00000641847 GJB3O75712 270 aa9.52□□□□□ -0.89
PHGDH-228ENST00000641847 NEBLO76041 1014 aa9.52□□□□□ -0.89
PHGDH-228ENST00000641847 HEXIM1O94992 359 aaKnown RBP9.52□□□□□ -0.89
PHGDH-228ENST00000641847 KAT7O95251 611 aa9.52□□□□□ -0.89
PHGDH-228ENST00000641847 JCHAINP01591 159 aa9.52□□□□□ -0.89
PHGDH-228ENST00000641847 KRT14P02533 472 aa9.52□□□□□ -0.89
PHGDH-228ENST00000641847 HLA-DQB2P05538 268 aa9.52□□□□□ -0.89
PHGDH-228ENST00000641847 RHOXF2BP0C7M4 288 aa9.52□□□□□ -0.89
PHGDH-228ENST00000641847 CCNB1P14635 433 aa9.52□□□□□ -0.89
PHGDH-228ENST00000641847 POLR2EP19388 210 aaKnown RBP9.52□□□□□ -0.89
PHGDH-228ENST00000641847 STIP1P31948 543 aaKnown RBP9.52□□□□□ -0.89
PHGDH-228ENST00000641847 GRIA2P42262 883 aa9.52□□□□□ -0.89
PHGDH-228ENST00000641847 CTSOP43234 321 aaPredicted RBP9.52□□□□□ -0.89
PHGDH-228ENST00000641847 GEMIN4P57678 1058 aaKnown RBP9.52□□□□□ -0.89
PHGDH-228ENST00000641847 CFHR1Q03591 330 aa9.52□□□□□ -0.89
PHGDH-228ENST00000641847 SULT2A1Q06520 285 aa9.52□□□□□ -0.89
PHGDH-228ENST00000641847 MESP2Q0VG99 397 aa9.52□□□□□ -0.89
PHGDH-228ENST00000641847 RFTN1Q14699 578 aaPredicted RBP9.52□□□□□ -0.89
PHGDH-228ENST00000641847 LBRQ14739 615 aaKnown RBP9.52□□□□□ -0.89
PHGDH-228ENST00000641847 P3H1Q32P28 736 aa9.52□□□□□ -0.89
PHGDH-228ENST00000641847 TMEM215Q68D42 235 aa9.52□□□□□ -0.89
PHGDH-228ENST00000641847 SDE2Q6IQ49 451 aa9.52□□□□□ -0.89
PHGDH-228ENST00000641847 RETSATQ6NUM9 610 aa9.52□□□□□ -0.89
PHGDH-228ENST00000641847 ARHGEF18Q6ZSZ5 1173 aa9.52□□□□□ -0.89
PHGDH-228ENST00000641847 GPR155Q7Z3F1 870 aa9.52□□□□□ -0.89
PHGDH-228ENST00000641847 ZNF567Q8N184 647 aa9.52□□□□□ -0.89
PHGDH-228ENST00000641847 CCHCR1Q8TD31 782 aa9.52□□□□□ -0.89
PHGDH-228ENST00000641847 RHBDD1Q8TEB9 315 aa9.52□□□□□ -0.89
PHGDH-228ENST00000641847 NXPE2Q96DL1 559 aa9.52□□□□□ -0.89
PHGDH-228ENST00000641847 CRELD1Q96HD1 420 aa9.52□□□□□ -0.89
PHGDH-228ENST00000641847 ZNF419Q96HQ0 510 aaPredicted RBP9.52□□□□□ -0.89
PHGDH-228ENST00000641847 SPATA13Q96N96 652 aa9.52□□□□□ -0.89
PHGDH-228ENST00000641847 FCRL3Q96P31 734 aaPredicted RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms