RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 TCAF1Q9Y4C2 921 aa8.94□□□□□ -0.98
PHGDH-219ENST00000641513 DOCK8Q8NF50 2099 aa8.93□□□□□ -0.98
PHGDH-219ENST00000641513 TRIM49D1C9J1S8 452 aa8.93□□□□□ -0.98
PHGDH-219ENST00000641513 GOLGA8RI6L899 631 aa8.93□□□□□ -0.98
PHGDH-219ENST00000641513 GFRA2O00451 464 aa8.93□□□□□ -0.98
PHGDH-219ENST00000641513 INSIG1O15503 277 aa8.93□□□□□ -0.98
PHGDH-219ENST00000641513 KRT37O76014 449 aa8.93□□□□□ -0.98
PHGDH-219ENST00000641513 KRT38O76015 456 aa8.93□□□□□ -0.98
PHGDH-219ENST00000641513 UBOX5O94941 541 aa8.93□□□□□ -0.98
PHGDH-219ENST00000641513 UNC5CO95185 931 aa8.93□□□□□ -0.98
PHGDH-219ENST00000641513 SNRPAP09012 282 aaKnown RBP8.93□□□□□ -0.98
PHGDH-219ENST00000641513 TYRP14679 529 aa8.93□□□□□ -0.98
PHGDH-219ENST00000641513 NQO1P15559 274 aaKnown RBP8.93□□□□□ -0.98
PHGDH-219ENST00000641513 PAMP19021 973 aa8.93□□□□□ -0.98
PHGDH-219ENST00000641513 CA4P22748 312 aa8.93□□□□□ -0.98
PHGDH-219ENST00000641513 CES1P23141 567 aa8.93□□□□□ -0.98
PHGDH-219ENST00000641513 ADRA1DP25100 572 aa8.93□□□□□ -0.98
PHGDH-219ENST00000641513 CNTFP26441 200 aa8.93□□□□□ -0.98
PHGDH-219ENST00000641513 FOXN2P32314 431 aa8.93□□□□□ -0.98
PHGDH-219ENST00000641513 CD70P32970 193 aa8.93□□□□□ -0.98
PHGDH-219ENST00000641513 CCNFP41002 786 aa8.93□□□□□ -0.98
PHGDH-219ENST00000641513 RGRP47804 291 aa8.93□□□□□ -0.98
PHGDH-219ENST00000641513 SERPINB9P50453 376 aa8.93□□□□□ -0.98
PHGDH-219ENST00000641513 USP4Q13107 963 aa8.93□□□□□ -0.98
PHGDH-219ENST00000641513 DNAJC3Q13217 504 aa8.93□□□□□ -0.98
PHGDH-219ENST00000641513 NAB1Q13506 487 aa8.93□□□□□ -0.98
PHGDH-219ENST00000641513 BMPR2Q13873 1038 aa8.93□□□□□ -0.98
PHGDH-219ENST00000641513 LRRC14Q15048 493 aa8.93□□□□□ -0.98
PHGDH-219ENST00000641513 SLC1A5Q15758 541 aa8.93□□□□□ -0.98
PHGDH-219ENST00000641513 PREPLQ4J6C6 727 aaPredicted RBP8.93□□□□□ -0.98
PHGDH-219ENST00000641513 PITRM1Q5JRX3 1037 aa8.93□□□□□ -0.98
PHGDH-219ENST00000641513 MPP7Q5T2T1 576 aa8.93□□□□□ -0.98
PHGDH-219ENST00000641513 HHATQ5VTY9 493 aa8.93□□□□□ -0.98
PHGDH-219ENST00000641513 FYB2Q5VWT5 728 aa8.93□□□□□ -0.98
PHGDH-219ENST00000641513 DENND5AQ6IQ26 1287 aa8.93□□□□□ -0.98
PHGDH-219ENST00000641513 RANBP10Q6VN20 620 aa8.93□□□□□ -0.98
PHGDH-219ENST00000641513 MARK2Q7KZI7 788 aaKnown RBP8.93□□□□□ -0.98
PHGDH-219ENST00000641513 KCNMB4Q86W47 210 aa8.93□□□□□ -0.98
PHGDH-219ENST00000641513 TRIM42Q8IWZ5 723 aa8.93□□□□□ -0.98
PHGDH-219ENST00000641513 TDHQ8IZJ6 230 aa8.93□□□□□ -0.98
PHGDH-219ENST00000641513 CELF5Q8N6W0 485 aaKnown RBP8.93□□□□□ -0.98
PHGDH-219ENST00000641513 NAT16Q8N8M0 369 aa8.93□□□□□ -0.98
PHGDH-219ENST00000641513 BANPQ8N9N5 519 aa8.93□□□□□ -0.98
PHGDH-219ENST00000641513 RIN3Q8TB24 985 aa8.93□□□□□ -0.98
PHGDH-219ENST00000641513 LRRC8CQ8TDW0 803 aa8.93□□□□□ -0.98
PHGDH-219ENST00000641513 PDCD6IPQ8WUM4 868 aaKnown RBP8.93□□□□□ -0.98
PHGDH-219ENST00000641513 IRF7Q92985 503 aa8.93□□□□□ -0.98
PHGDH-219ENST00000641513 TTC17Q96AE7 1141 aa8.93□□□□□ -0.98
PHGDH-219ENST00000641513 RMDN1Q96DB5 314 aa8.93□□□□□ -0.98
PHGDH-219ENST00000641513 APOPT1Q96IL0 206 aa8.93□□□□□ -0.98
PHGDH-219ENST00000641513 FEM1CQ96JP0 617 aa8.93□□□□□ -0.98
PHGDH-219ENST00000641513 NUDCD1Q96RS6 583 aa8.93□□□□□ -0.98
PHGDH-219ENST00000641513 KLF6Q99612 283 aaPredicted RBP8.93□□□□□ -0.98
PHGDH-219ENST00000641513 TUBB6Q9BUF5 446 aa8.93□□□□□ -0.98
PHGDH-219ENST00000641513 LRMDAQ9H2I8 198 aa8.93□□□□□ -0.98
PHGDH-219ENST00000641513 NSUN3Q9H649 340 aaKnown RBP8.93□□□□□ -0.98
PHGDH-219ENST00000641513 YY1AP1Q9H869 796 aa8.93□□□□□ -0.98
PHGDH-219ENST00000641513 PLAC1Q9HBJ0 212 aa8.93□□□□□ -0.98
PHGDH-219ENST00000641513 MLXIPLQ9NP71 852 aa8.93□□□□□ -0.98
PHGDH-219ENST00000641513 SAR1AQ9NR31 198 aa8.93□□□□□ -0.98
PHGDH-219ENST00000641513 SPHK2Q9NRA0 654 aa8.93□□□□□ -0.98
PHGDH-219ENST00000641513 IARS2Q9NSE4 1012 aaKnown RBP8.93□□□□□ -0.98
PHGDH-219ENST00000641513 ABCB8Q9NUT2 735 aa8.93□□□□□ -0.98
PHGDH-219ENST00000641513 DUS2Q9NX74 493 aaKnown RBP8.93□□□□□ -0.98
PHGDH-219ENST00000641513 MOCS1Q9NZB8 636 aa8.93□□□□□ -0.98
PHGDH-219ENST00000641513 SLC17A6Q9P2U8 582 aa8.93□□□□□ -0.98
PHGDH-219ENST00000641513 SLC25A13Q9UJS0 675 aa8.93□□□□□ -0.98
PHGDH-219ENST00000641513 CLEC4EQ9ULY5 219 aa8.93□□□□□ -0.98
PHGDH-219ENST00000641513 CHKBQ9Y259 395 aa8.93□□□□□ -0.98
PHGDH-219ENST00000641513 KIAA1549LQ6ZVL6 1849 aa8.93□□□□□ -0.98
PHGDH-219ENST00000641513 LAMA2P24043 3122 aaKnown RBP8.93□□□□□ -0.98
PHGDH-219ENST00000641513 SCN8AQ9UQD0 1980 aa8.92□□□□□ -0.98
PHGDH-219ENST00000641513 DENND4AQ7Z401 1863 aa8.92□□□□□ -0.98
PHGDH-219ENST00000641513 HEATR9A2RTY3 570 aa8.92□□□□□ -0.98
PHGDH-219ENST00000641513 GOLGA8TH3BQL2 631 aa8.92□□□□□ -0.98
PHGDH-219ENST00000641513 LINC01565O15544 149 aa8.92□□□□□ -0.98
PHGDH-219ENST00000641513 BNIP3LO60238 219 aa8.92□□□□□ -0.98
PHGDH-219ENST00000641513 ZMPSTE24O75844 475 aa8.92□□□□□ -0.98
PHGDH-219ENST00000641513 ALDH1A2O94788 518 aa8.92□□□□□ -0.98
PHGDH-219ENST00000641513 ATP6V1G2O95670 118 aa8.92□□□□□ -0.98
PHGDH-219ENST00000641513 NDST3O95803 873 aa8.92□□□□□ -0.98
PHGDH-219ENST00000641513 MT-CO1P00395 513 aa8.92□□□□□ -0.98
PHGDH-219ENST00000641513 SLC4A1P02730 911 aa8.92□□□□□ -0.98
PHGDH-219ENST00000641513 FGF1P05230 155 aa8.92□□□□□ -0.98
PHGDH-219ENST00000641513 TROVE2P10155 538 aaKnown RBP eCLIP8.92□□□□□ -0.98
PHGDH-219ENST00000641513 KRT4P19013 534 aa8.92□□□□□ -0.98
PHGDH-219ENST00000641513 HLA-DPA1P20036 260 aa8.92□□□□□ -0.98
PHGDH-219ENST00000641513 WEE1P30291 646 aa8.92□□□□□ -0.98
PHGDH-219ENST00000641513 VIPR2P41587 438 aa8.92□□□□□ -0.98
PHGDH-219ENST00000641513 RASSF2P50749 326 aa8.92□□□□□ -0.98
PHGDH-219ENST00000641513 MNAT1P51948 309 aa8.92□□□□□ -0.98
PHGDH-219ENST00000641513 NEK3P51956 506 aa8.92□□□□□ -0.98
PHGDH-219ENST00000641513 SLC12A1Q13621 1099 aa8.92□□□□□ -0.98
PHGDH-219ENST00000641513 THOC5Q13769 683 aaKnown RBP8.92□□□□□ -0.98
PHGDH-219ENST00000641513 PLEKHG6Q3KR16 790 aa8.92□□□□□ -0.98
PHGDH-219ENST00000641513 ACCSLQ4AC99 568 aa8.92□□□□□ -0.98
PHGDH-219ENST00000641513 INO80DQ53TQ3 878 aaPredicted RBP8.92□□□□□ -0.98
PHGDH-219ENST00000641513 HSP90AA5PQ58FG0 334 aa8.92□□□□□ -0.98
PHGDH-219ENST00000641513 TCEAL5Q5H9L2 206 aa8.92□□□□□ -0.98
PHGDH-219ENST00000641513 LY6G5CQ5SRR4 150 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms