RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 LMNTD2Q8IXW0 634 aa16.57■□□□□ 0.24
PHGDH-216ENST00000641375 FIBINQ8TAL6 211 aa16.57■□□□□ 0.24
PHGDH-216ENST00000641375 WFDC5Q8TCV5 224 aa16.57■□□□□ 0.24
PHGDH-216ENST00000641375 ATXN7L3BQ96GX2 97 aa16.57■□□□□ 0.24
PHGDH-216ENST00000641375 EXOC2Q96KP1 924 aa16.57■□□□□ 0.24
PHGDH-216ENST00000641375 GPR22Q99680 433 aa16.57■□□□□ 0.24
PHGDH-216ENST00000641375 TDP1Q9NUW8 608 aa16.57■□□□□ 0.24
PHGDH-216ENST00000641375 PHTF1Q9UMS5 762 aa16.57■□□□□ 0.24
PHGDH-216ENST00000641375 USP15Q9Y4E8 981 aaPredicted RBP16.57■□□□□ 0.24
PHGDH-216ENST00000641375 BPTFQ12830 3046 aa16.56■□□□□ 0.24
PHGDH-216ENST00000641375 EDF1O60869 148 aaKnown RBP16.56■□□□□ 0.24
PHGDH-216ENST00000641375 C6orf89Q6UWU4 347 aa16.56■□□□□ 0.24
PHGDH-216ENST00000641375 LINGO4Q6UY18 593 aa16.56■□□□□ 0.24
PHGDH-216ENST00000641375 FAM47EQ6ZV65 393 aa16.56■□□□□ 0.24
PHGDH-216ENST00000641375 YTHDF3Q7Z739 585 aaKnown RBP16.56■□□□□ 0.24
PHGDH-216ENST00000641375 C2CD4AQ8NCU7 369 aaPredicted RBP16.56■□□□□ 0.24
PHGDH-216ENST00000641375 ARMC2Q8NEN0 867 aa16.56■□□□□ 0.24
PHGDH-216ENST00000641375 OR13J1Q8NGT2 312 aa16.56■□□□□ 0.24
PHGDH-216ENST00000641375 PLCD4Q9BRC7 762 aa16.56■□□□□ 0.24
PHGDH-216ENST00000641375 TDRD1Q9BXT4 1180 aaKnown RBP16.56■□□□□ 0.24
PHGDH-216ENST00000641375 SMG9Q9H0W8 520 aaKnown RBP16.56■□□□□ 0.24
PHGDH-216ENST00000641375 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.56■□□□□ 0.242e-10■□□□□ 9.2
PHGDH-216ENST00000641375 RIMKLBQ9ULI2 386 aa16.56■□□□□ 0.24
PHGDH-216ENST00000641375 MTO1Q9Y2Z2 717 aaKnown RBP16.56■□□□□ 0.24
PHGDH-216ENST00000641375 MYO7AQ13402 2215 aa16.56■□□□□ 0.24
PHGDH-216ENST00000641375 GRXCR1A8MXD5 290 aa16.55■□□□□ 0.24
PHGDH-216ENST00000641375 KLF11O14901 512 aa16.55■□□□□ 0.24
PHGDH-216ENST00000641375 BIRC5O15392 142 aa16.55■□□□□ 0.24
PHGDH-216ENST00000641375 SLC7A4O43246 635 aa16.55■□□□□ 0.24
PHGDH-216ENST00000641375 LDB2O43679 373 aa16.55■□□□□ 0.24
PHGDH-216ENST00000641375 MOSPD3O75425 235 aa16.55■□□□□ 0.24
PHGDH-216ENST00000641375 AHSGP02765 367 aa16.55■□□□□ 0.24
PHGDH-216ENST00000641375 GSTA1P08263 222 aa16.55■□□□□ 0.24
PHGDH-216ENST00000641375 GPM6BQ13491 265 aa16.55■□□□□ 0.24
PHGDH-216ENST00000641375 SLC12A1Q13621 1099 aa16.55■□□□□ 0.24
PHGDH-216ENST00000641375 GALNT3Q14435 633 aa16.55■□□□□ 0.24
PHGDH-216ENST00000641375 DBN1Q16643 649 aa16.55■□□□□ 0.24
PHGDH-216ENST00000641375 ZNF470Q6ECI4 717 aa16.55■□□□□ 0.24
PHGDH-216ENST00000641375 MICALL1Q8N3F8 863 aa16.55■□□□□ 0.24
PHGDH-216ENST00000641375 BLOC1S5Q8TDH9 187 aa16.55■□□□□ 0.24
PHGDH-216ENST00000641375 ADGRE3Q9BY15 652 aa16.55■□□□□ 0.24
PHGDH-216ENST00000641375 CCL26Q9Y258 94 aa16.55■□□□□ 0.24
PHGDH-216ENST00000641375 NOTCH4Q99466 2003 aa16.55■□□□□ 0.24
PHGDH-216ENST00000641375 CXorf51AA0A1B0GTR3 108 aa16.55■□□□□ 0.24
PHGDH-216ENST00000641375 ZNF197O14709 1029 aa16.55■□□□□ 0.24
PHGDH-216ENST00000641375 KIAA0754O94854 1291 aa16.55■□□□□ 0.24
PHGDH-216ENST00000641375 SLC1A2P43004 574 aa16.55■□□□□ 0.24
PHGDH-216ENST00000641375 ERVK-21P61565 698 aa16.55■□□□□ 0.24
PHGDH-216ENST00000641375 RHOAP61586 193 aa16.55■□□□□ 0.24
PHGDH-216ENST00000641375 PRAMEP78395 509 aa16.55■□□□□ 0.24
PHGDH-216ENST00000641375 ILF2Q12905 390 aaKnown RBP16.55■□□□□ 0.24
PHGDH-216ENST00000641375 CTBP1Q13363 440 aa16.55■□□□□ 0.24
PHGDH-216ENST00000641375 C9orf50Q5SZB4 431 aa16.55■□□□□ 0.24
PHGDH-216ENST00000641375 GALNT7Q86SF2 657 aa16.55■□□□□ 0.24
PHGDH-216ENST00000641375 DENND6AQ8IWF6 608 aa16.55■□□□□ 0.24
PHGDH-216ENST00000641375 RAB3IL1Q8TBN0 382 aa16.55■□□□□ 0.24
PHGDH-216ENST00000641375 RMDN1Q96DB5 314 aa16.55■□□□□ 0.24
PHGDH-216ENST00000641375 CHKBQ9Y259 395 aa16.55■□□□□ 0.24
PHGDH-216ENST00000641375 CRTAMO95727 393 aa16.54■□□□□ 0.24
PHGDH-216ENST00000641375 ACVR1Q04771 509 aa16.54■□□□□ 0.24
PHGDH-216ENST00000641375 IFT88Q13099 833 aa16.54■□□□□ 0.24
PHGDH-216ENST00000641375 SLC5A9Q2M3M2 681 aa16.54■□□□□ 0.24
PHGDH-216ENST00000641375 PRSS36Q5K4E3 855 aa16.54■□□□□ 0.24
PHGDH-216ENST00000641375 CMC1Q7Z7K0 106 aa16.54■□□□□ 0.24
PHGDH-216ENST00000641375 USP13Q92995 863 aaPredicted RBP16.54■□□□□ 0.24
PHGDH-216ENST00000641375 MFSD1Q9H3U5 465 aa16.54■□□□□ 0.24
PHGDH-216ENST00000641375 SLCO1B3Q9NPD5 702 aa16.54■□□□□ 0.24
PHGDH-216ENST00000641375 PLK2Q9NYY3 685 aa16.54■□□□□ 0.24
PHGDH-216ENST00000641375 TBC1D14Q9P2M4 693 aa16.54■□□□□ 0.24
PHGDH-216ENST00000641375 LHX3Q9UBR4 397 aa16.54■□□□□ 0.24
PHGDH-216ENST00000641375 FBXO5Q9UKT4 447 aa16.54■□□□□ 0.24
PHGDH-216ENST00000641375 RAI2Q9Y5P3 530 aa16.54■□□□□ 0.24
PHGDH-216ENST00000641375 HCFC2Q9Y5Z7 792 aa16.54■□□□□ 0.24
PHGDH-216ENST00000641375 A0A096LPK6 155 aa16.54■□□□□ 0.24
PHGDH-216ENST00000641375 CCDC195A0A1B0GUA6 201 aa16.54■□□□□ 0.24
PHGDH-216ENST00000641375 PER2O15055 1255 aa16.54■□□□□ 0.24
PHGDH-216ENST00000641375 GABRB3P28472 473 aa16.54■□□□□ 0.24
PHGDH-216ENST00000641375 CD151P48509 253 aa16.54■□□□□ 0.24
PHGDH-216ENST00000641375 PLK1P53350 603 aa16.54■□□□□ 0.24
PHGDH-216ENST00000641375 LMAN2Q12907 356 aa16.54■□□□□ 0.24
PHGDH-216ENST00000641375 GRM3Q14832 879 aa16.54■□□□□ 0.24
PHGDH-216ENST00000641375 CCDC153Q494R4 210 aa16.54■□□□□ 0.24
PHGDH-216ENST00000641375 N4BP2L1Q5TBK1 243 aaPredicted RBP16.54■□□□□ 0.24
PHGDH-216ENST00000641375 FAM109BQ6ICB4 259 aaPredicted RBP16.54■□□□□ 0.24
PHGDH-216ENST00000641375 NCEH1Q6PIU2 408 aa16.54■□□□□ 0.24
PHGDH-216ENST00000641375 EP400NLQ6ZTU2 488 aa16.54■□□□□ 0.24
PHGDH-216ENST00000641375 APCDD1Q8J025 514 aa16.54■□□□□ 0.24
PHGDH-216ENST00000641375 ZNF557Q8N988 423 aaPredicted RBP16.54■□□□□ 0.24
PHGDH-216ENST00000641375 CCDC63Q8NA47 563 aa16.54■□□□□ 0.24
PHGDH-216ENST00000641375 STYXQ8WUJ0 223 aa16.54■□□□□ 0.24
PHGDH-216ENST00000641375 GGT7Q9UJ14 662 aa16.54■□□□□ 0.24
PHGDH-216ENST00000641375 SLC39A10Q9ULF5 831 aa16.54■□□□□ 0.24
PHGDH-216ENST00000641375 ARL2BPQ9Y2Y0 163 aa16.54■□□□□ 0.24
PHGDH-216ENST00000641375 CHD9Q3L8U1 2897 aa16.54■□□□□ 0.24
PHGDH-216ENST00000641375 MPP1Q00013 466 aa16.53■□□□□ 0.24
PHGDH-216ENST00000641375 PLEKHG6Q3KR16 790 aa16.53■□□□□ 0.24
PHGDH-216ENST00000641375 PPM1JQ5JR12 505 aa16.53■□□□□ 0.24
PHGDH-216ENST00000641375 ATG16L1Q676U5 607 aa16.53■□□□□ 0.24
PHGDH-216ENST00000641375 CGB2Q6NT52 195 aa16.53■□□□□ 0.24
PHGDH-216ENST00000641375 GRASPQ7Z6J2 395 aaPredicted RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms