RNA–Protein interactions for RNA: ENST00000640807.1

KCNMA1-289, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 3,387 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-289ENST00000640807 BRAT1Q6PJG6 821 aa11.96□□□□□ -0.49
KCNMA1-289ENST00000640807 KDELC1Q6UW63 502 aa11.96□□□□□ -0.49
KCNMA1-289ENST00000640807 KIAA1324Q6UXG2 1013 aaKnown RBP11.96□□□□□ -0.49
KCNMA1-289ENST00000640807 TTC7BQ86TV6 843 aa11.96□□□□□ -0.49
KCNMA1-289ENST00000640807 ZNF687Q8N1G0 1237 aa11.96□□□□□ -0.49
KCNMA1-289ENST00000640807 SPEM1Q8N4L4 309 aa11.96□□□□□ -0.49
KCNMA1-289ENST00000640807 TSTD1Q8NFU3 115 aa11.96□□□□□ -0.49
KCNMA1-289ENST00000640807 PRCCQ92733 491 aaPredicted RBP11.96□□□□□ -0.49
KCNMA1-289ENST00000640807 CLDN23Q96B33 292 aa11.96□□□□□ -0.49
KCNMA1-289ENST00000640807 MRGPRX2Q96LB1 330 aa11.96□□□□□ -0.49
KCNMA1-289ENST00000640807 MTRF1LQ9UGC7 380 aaKnown RBP11.96□□□□□ -0.49
KCNMA1-289ENST00000640807 PPM1HQ9ULR3 514 aa11.96□□□□□ -0.49
KCNMA1-289ENST00000640807 TCRBV21S2A2A0A5A6 115 aa11.96□□□□□ -0.5
KCNMA1-289ENST00000640807 AP3B1O00203 1094 aa11.96□□□□□ -0.5
KCNMA1-289ENST00000640807 ALDH1A2O94788 518 aa11.96□□□□□ -0.5
KCNMA1-289ENST00000640807 PDGFBP01127 241 aaPredicted RBP11.96□□□□□ -0.5
KCNMA1-289ENST00000640807 HLA-DPA1P20036 260 aa11.96□□□□□ -0.5
KCNMA1-289ENST00000640807 RPS9P46781 194 aaKnown RBP11.96□□□□□ -0.5
KCNMA1-289ENST00000640807 CUL1Q13616 776 aa11.96□□□□□ -0.5
KCNMA1-289ENST00000640807 KCNJ11Q14654 390 aa11.96□□□□□ -0.5
KCNMA1-289ENST00000640807 CST6Q15828 149 aa11.96□□□□□ -0.5
KCNMA1-289ENST00000640807 FBXL19Q6PCT2 694 aa11.96□□□□□ -0.5
KCNMA1-289ENST00000640807 HMGB4Q8WW32 186 aa11.96□□□□□ -0.5
KCNMA1-289ENST00000640807 RSPH9Q9H1X1 276 aaPredicted RBP11.96□□□□□ -0.5
KCNMA1-289ENST00000640807 XAB2Q9HCS7 855 aaKnown RBP11.96□□□□□ -0.5
KCNMA1-289ENST00000640807 VCANP13611 3396 aa11.95□□□□□ -0.5
KCNMA1-289ENST00000640807 A0A1W2PQF6 199 aa11.95□□□□□ -0.5
KCNMA1-289ENST00000640807 PGLSO95336 258 aa11.95□□□□□ -0.5
KCNMA1-289ENST00000640807 ADH1BP00325 375 aa11.95□□□□□ -0.5
KCNMA1-289ENST00000640807 CPP00450 1065 aa11.95□□□□□ -0.5
KCNMA1-289ENST00000640807 CTSLP07711 333 aa11.95□□□□□ -0.5
KCNMA1-289ENST00000640807 MCM3P25205 808 aa11.95□□□□□ -0.5
KCNMA1-289ENST00000640807 FZD5Q13467 585 aa11.95□□□□□ -0.5
KCNMA1-289ENST00000640807 GALNT3Q14435 633 aa11.95□□□□□ -0.5
KCNMA1-289ENST00000640807 TTC31Q49AM3 519 aaPredicted RBP11.95□□□□□ -0.5
KCNMA1-289ENST00000640807 ANKRD22Q5VYY1 191 aa11.95□□□□□ -0.5
KCNMA1-289ENST00000640807 TMEM92Q6UXU6 159 aa11.95□□□□□ -0.5
KCNMA1-289ENST00000640807 PDIK1LQ8N165 341 aa11.95□□□□□ -0.5
KCNMA1-289ENST00000640807 OMDQ99983 421 aa11.95□□□□□ -0.5
KCNMA1-289ENST00000640807 FRMD8Q9BZ67 464 aaPredicted RBP11.95□□□□□ -0.5
KCNMA1-289ENST00000640807 EPC1Q9H2F5 836 aa11.95□□□□□ -0.5
KCNMA1-289ENST00000640807 TCRBV7S3A2A0A539 114 aa11.95□□□□□ -0.5
KCNMA1-289ENST00000640807 FGF1P05230 155 aa11.95□□□□□ -0.5
KCNMA1-289ENST00000640807 PDHA1P08559 390 aa11.95□□□□□ -0.5
KCNMA1-289ENST00000640807 MAGEA9P43362 315 aa11.95□□□□□ -0.5
KCNMA1-289ENST00000640807 CDH17Q12864 832 aa11.95□□□□□ -0.5
KCNMA1-289ENST00000640807 TRADDQ15628 312 aa11.95□□□□□ -0.5
KCNMA1-289ENST00000640807 KCTD11Q693B1 232 aa11.95□□□□□ -0.5
KCNMA1-289ENST00000640807 NAT8LQ8N9F0 302 aa11.95□□□□□ -0.5
KCNMA1-289ENST00000640807 OR52K1Q8NGK4 314 aa11.95□□□□□ -0.5
KCNMA1-289ENST00000640807 PBXIP1Q96AQ6 731 aa11.95□□□□□ -0.5
KCNMA1-289ENST00000640807 MKRN2Q9H000 416 aaKnown RBP11.95□□□□□ -0.5
KCNMA1-289ENST00000640807 POLR3BQ9NW08 1133 aaPredicted RBP11.95□□□□□ -0.5
KCNMA1-289ENST00000640807 BFARQ9NZS9 450 aa11.95□□□□□ -0.5
KCNMA1-289ENST00000640807 SARDHQ9UL12 918 aa11.95□□□□□ -0.5
KCNMA1-289ENST00000640807 NEMP1O14524 444 aa11.95□□□□□ -0.5
KCNMA1-289ENST00000640807 HTRA2O43464 458 aaPredicted RBP11.95□□□□□ -0.5
KCNMA1-289ENST00000640807 COL9A1P20849 921 aa11.95□□□□□ -0.5
KCNMA1-289ENST00000640807 MAGEA6P43360 314 aa11.95□□□□□ -0.5
KCNMA1-289ENST00000640807 SESN2P58004 480 aaPredicted RBP11.95□□□□□ -0.5
KCNMA1-289ENST00000640807 RPL26P61254 145 aaKnown RBP11.95□□□□□ -0.5
KCNMA1-289ENST00000640807 OLIG2Q13516 323 aa11.95□□□□□ -0.5
KCNMA1-289ENST00000640807 IHHQ14623 411 aa11.95□□□□□ -0.5
KCNMA1-289ENST00000640807 SLC1A5Q15758 541 aa11.95□□□□□ -0.5
KCNMA1-289ENST00000640807 ANO7Q6IWH7 933 aa11.95□□□□□ -0.5
KCNMA1-289ENST00000640807 HIBCHQ6NVY1 386 aaPredicted RBP11.95□□□□□ -0.5
KCNMA1-289ENST00000640807 RANBP10Q6VN20 620 aa11.95□□□□□ -0.5
KCNMA1-289ENST00000640807 GPR161Q8N6U8 529 aaKnown RBP11.95□□□□□ -0.5
KCNMA1-289ENST00000640807 MCUQ8NE86 351 aa11.95□□□□□ -0.5
KCNMA1-289ENST00000640807 FBXO25Q8TCJ0 367 aa11.95□□□□□ -0.5
KCNMA1-289ENST00000640807 TADA1Q96BN2 335 aa11.95□□□□□ -0.5
KCNMA1-289ENST00000640807 GORASP1Q9BQQ3 440 aa11.95□□□□□ -0.5
KCNMA1-289ENST00000640807 PHTF1Q9UMS5 762 aa11.95□□□□□ -0.5
KCNMA1-289ENST00000640807 RPL26L1Q9UNX3 145 aaKnown RBP11.95□□□□□ -0.5
KCNMA1-289ENST00000640807 NCKAP1Q9Y2A7 1128 aa11.95□□□□□ -0.5
KCNMA1-289ENST00000640807 C16orf96A6NNT2 1141 aa11.94□□□□□ -0.5
KCNMA1-289ENST00000640807 ANKRD66B4E2M5 251 aa11.94□□□□□ -0.5
KCNMA1-289ENST00000640807 MID1O15344 667 aa11.94□□□□□ -0.5
KCNMA1-289ENST00000640807 TMEM63AO94886 807 aa11.94□□□□□ -0.5
KCNMA1-289ENST00000640807 SUN1O94901 812 aa11.94□□□□□ -0.5
KCNMA1-289ENST00000640807 C5AR1P21730 350 aa11.94□□□□□ -0.5
KCNMA1-289ENST00000640807 ITGB7P26010 798 aa11.94□□□□□ -0.5
KCNMA1-289ENST00000640807 CHRNA4P43681 627 aa11.94□□□□□ -0.5
KCNMA1-289ENST00000640807 CXCL12P48061 93 aa11.94□□□□□ -0.5
KCNMA1-289ENST00000640807 ARL4CP56559 192 aa11.94□□□□□ -0.5
KCNMA1-289ENST00000640807 GAS6Q14393 721 aa11.94□□□□□ -0.5
KCNMA1-289ENST00000640807 CCDC25Q86WR0 208 aa11.94□□□□□ -0.5
KCNMA1-289ENST00000640807 NSMCE3Q96MG7 304 aa11.94□□□□□ -0.5
KCNMA1-289ENST00000640807 IER2Q9BTL4 223 aa11.94□□□□□ -0.5
KCNMA1-289ENST00000640807 FAM129AQ9BZQ8 928 aa11.94□□□□□ -0.5
KCNMA1-289ENST00000640807 PIH1D1Q9NWS0 290 aaKnown RBP11.94□□□□□ -0.5
KCNMA1-289ENST00000640807 GRHL1Q9NZI5 618 aa11.94□□□□□ -0.5
KCNMA1-289ENST00000640807 DKK3Q9UBP4 350 aa11.94□□□□□ -0.5
KCNMA1-289ENST00000640807 LOC285095A0A1B0GVY8 99 aa11.94□□□□□ -0.5
KCNMA1-289ENST00000640807 TRAFD1O14545 582 aaPredicted RBP11.94□□□□□ -0.5
KCNMA1-289ENST00000640807 RNASEH2AO75792 299 aaKnown RBP11.94□□□□□ -0.5
KCNMA1-289ENST00000640807 TUBBP07437 444 aa11.94□□□□□ -0.5
KCNMA1-289ENST00000640807 CHRM1P11229 460 aaPredicted RBP11.94□□□□□ -0.5
KCNMA1-289ENST00000640807 CARSP49589 748 aaKnown RBP11.94□□□□□ -0.5
KCNMA1-289ENST00000640807 CLCN5P51795 746 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms