RNA–Protein interactions for RNA: ENST00000640615.1

HLA-B-258, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-258ENST00000640615 COL4A3Q01955 1670 aa8.85□□□□□ -0.99
HLA-B-258ENST00000640615 SDR42E2A6NKP2 422 aa8.84□□□□□ -0.99
HLA-B-258ENST00000640615 NPC1O15118 1278 aa8.84□□□□□ -0.99
HLA-B-258ENST00000640615 EIF3HO15372 352 aaKnown RBP eCLIP8.84□□□□□ -0.99
HLA-B-258ENST00000640615 SYNCRIPO60506 623 aaKnown RBP8.84□□□□□ -0.99
HLA-B-258ENST00000640615 SIN3BO75182 1162 aa8.84□□□□□ -0.99
HLA-B-258ENST00000640615 LEFTY1O75610 366 aa8.84□□□□□ -0.99
HLA-B-258ENST00000640615 KLF8O95600 359 aaPredicted RBP8.84□□□□□ -0.99
HLA-B-258ENST00000640615 NDST3O95803 873 aa8.84□□□□□ -0.99
HLA-B-258ENST00000640615 CPP00450 1065 aa8.84□□□□□ -0.99
HLA-B-258ENST00000640615 EPOP01588 193 aa8.84□□□□□ -0.99
HLA-B-258ENST00000640615 UGT2B4P06133 528 aa8.84□□□□□ -0.99
HLA-B-258ENST00000640615 PDHA1P08559 390 aa8.84□□□□□ -0.99
HLA-B-258ENST00000640615 ATXN1LP0C7T5 689 aaKnown RBP8.84□□□□□ -0.99
HLA-B-258ENST00000640615 H2AFXP16104 143 aaPredicted RBP8.84□□□□□ -0.99
HLA-B-258ENST00000640615 HLA-DPA1P20036 260 aa8.84□□□□□ -0.99
HLA-B-258ENST00000640615 NTSR1P30989 418 aa8.84□□□□□ -0.99
HLA-B-258ENST00000640615 MAGEA4P43358 317 aa8.84□□□□□ -0.99
HLA-B-258ENST00000640615 KIR2DL1P43626 348 aaPredicted RBP8.84□□□□□ -0.99
HLA-B-258ENST00000640615 NPY2RP49146 381 aa8.84□□□□□ -0.99
HLA-B-258ENST00000640615 PMS2P54278 862 aa8.84□□□□□ -0.99
HLA-B-258ENST00000640615 EPHB1P54762 984 aa8.84□□□□□ -0.99
HLA-B-258ENST00000640615 PRKCQQ04759 706 aa8.84□□□□□ -0.99
HLA-B-258ENST00000640615 CDH17Q12864 832 aa8.84□□□□□ -0.99
HLA-B-258ENST00000640615 GRM3Q14832 879 aa8.84□□□□□ -0.99
HLA-B-258ENST00000640615 SLC1A5Q15758 541 aa8.84□□□□□ -0.99
HLA-B-258ENST00000640615 FBXO43Q4G163 708 aa8.84□□□□□ -0.99
HLA-B-258ENST00000640615 CERCAMQ5T4B2 595 aa8.84□□□□□ -0.99
HLA-B-258ENST00000640615 C9orf64Q5T6V5 341 aa8.84□□□□□ -0.99
HLA-B-258ENST00000640615 ARMC12Q5T9G4 340 aa8.84□□□□□ -0.99
HLA-B-258ENST00000640615 DENND5AQ6IQ26 1287 aa8.84□□□□□ -0.99
HLA-B-258ENST00000640615 CASC4Q6P4E1 433 aa8.84□□□□□ -0.99
HLA-B-258ENST00000640615 FBXO38Q6PIJ6 1188 aa8.84□□□□□ -0.99
HLA-B-258ENST00000640615 GDPD4Q6W3E5 623 aa8.84□□□□□ -0.99
HLA-B-258ENST00000640615 BMP8AQ7Z5Y6 402 aa8.84□□□□□ -0.99
HLA-B-258ENST00000640615 ANKMY2Q8IV38 441 aa8.84□□□□□ -0.99
HLA-B-258ENST00000640615 UBALD2Q8IYN6 164 aa8.84□□□□□ -0.99
HLA-B-258ENST00000640615 ZBED8Q8IZ13 594 aa8.84□□□□□ -0.99
HLA-B-258ENST00000640615 LPCAT1Q8NF37 534 aa8.84□□□□□ -0.99
HLA-B-258ENST00000640615 KCNV2Q8TDN2 545 aa8.84□□□□□ -0.99
HLA-B-258ENST00000640615 HNRNPLLQ8WVV9 542 aaKnown RBP8.84□□□□□ -0.99
HLA-B-258ENST00000640615 CAVIN3Q969G5 261 aa8.84□□□□□ -0.99
HLA-B-258ENST00000640615 SHDQ96IW2 340 aa8.84□□□□□ -0.99
HLA-B-258ENST00000640615 C9orf72Q96LT7 481 aa8.84□□□□□ -0.99
HLA-B-258ENST00000640615 KLHL32Q96NJ5 620 aa8.84□□□□□ -0.99
HLA-B-258ENST00000640615 TRIB3Q96RU7 358 aa8.84□□□□□ -0.99
HLA-B-258ENST00000640615 OSBPL1AQ9BXW6 950 aa8.84□□□□□ -0.99
HLA-B-258ENST00000640615 SUV39H2Q9H5I1 410 aa8.84□□□□□ -0.99
HLA-B-258ENST00000640615 ARFGAP3Q9NP61 516 aa8.84□□□□□ -0.99
HLA-B-258ENST00000640615 PRSS16Q9NQE7 514 aa8.84□□□□□ -0.99
HLA-B-258ENST00000640615 WNT16Q9UBV4 365 aa8.84□□□□□ -0.99
HLA-B-258ENST00000640615 PCDHB9Q9Y5E1 797 aa8.84□□□□□ -0.99
HLA-B-258ENST00000640615 MAD1L1Q9Y6D9 718 aa8.84□□□□□ -0.99
HLA-B-258ENST00000640615 WASF2Q9Y6W5 498 aa8.84□□□□□ -0.99
HLA-B-258ENST00000640615 CHD5Q8TDI0 1954 aa8.84□□□□□ -0.99
HLA-B-258ENST00000640615 SHROOM3Q8TF72 1996 aa8.84□□□□□ -0.99
HLA-B-258ENST00000640615 KRBA1A5PL33 1030 aa8.83□□□□□ -1
HLA-B-258ENST00000640615 SHISA7A6NL88 538 aa8.83□□□□□ -1
HLA-B-258ENST00000640615 E7ESA3 106 aa8.83□□□□□ -1
HLA-B-258ENST00000640615 TRAFD1O14545 582 aaPredicted RBP8.83□□□□□ -1
HLA-B-258ENST00000640615 DYNC1I1O14576 645 aa8.83□□□□□ -1
HLA-B-258ENST00000640615 ALOX15BO15296 676 aa8.83□□□□□ -1
HLA-B-258ENST00000640615 HTRA2O43464 458 aaPredicted RBP8.83□□□□□ -1
HLA-B-258ENST00000640615 FZD6O60353 706 aa8.83□□□□□ -1
HLA-B-258ENST00000640615 RNF40O75150 1001 aa8.83□□□□□ -1
HLA-B-258ENST00000640615 SOCS5O75159 536 aa8.83□□□□□ -1
HLA-B-258ENST00000640615 PGLSO95336 258 aa8.83□□□□□ -1
HLA-B-258ENST00000640615 PRLP01236 227 aa8.83□□□□□ -1
HLA-B-258ENST00000640615 PRNPP04156 253 aa8.83□□□□□ -1
HLA-B-258ENST00000640615 FGF1P05230 155 aa8.83□□□□□ -1
HLA-B-258ENST00000640615 CTSLP07711 333 aa8.83□□□□□ -1
HLA-B-258ENST00000640615 CTPS1P17812 591 aa8.83□□□□□ -1
HLA-B-258ENST00000640615 SLC8A1P32418 973 aa8.83□□□□□ -1
HLA-B-258ENST00000640615 ELK3P41970 407 aa8.83□□□□□ -1
HLA-B-258ENST00000640615 MAGEA3P43357 314 aa8.83□□□□□ -1
HLA-B-258ENST00000640615 CRADDP78560 199 aa8.83□□□□□ -1
HLA-B-258ENST00000640615 MRPS21P82921 87 aaKnown RBP8.83□□□□□ -1
HLA-B-258ENST00000640615 NHLH1Q02575 133 aa8.83□□□□□ -1
HLA-B-258ENST00000640615 ENPP2Q13822 863 aa8.83□□□□□ -1
HLA-B-258ENST00000640615 SEPT6Q14141 434 aa8.83□□□□□ -1
HLA-B-258ENST00000640615 STARD3Q14849 445 aa8.83□□□□□ -1
HLA-B-258ENST00000640615 FASTKD3Q14CZ7 662 aaKnown RBP8.83□□□□□ -1
HLA-B-258ENST00000640615 QPCTQ16769 361 aa8.83□□□□□ -1
HLA-B-258ENST00000640615 BEND6Q5SZJ8 279 aaPredicted RBP8.83□□□□□ -1
HLA-B-258ENST00000640615 TRMT11Q7Z4G4 463 aaKnown RBP8.83□□□□□ -1
HLA-B-258ENST00000640615 TMC3Q7Z5M5 1100 aa8.83□□□□□ -1
HLA-B-258ENST00000640615 DSG4Q86SJ6 1040 aa8.83□□□□□ -1
HLA-B-258ENST00000640615 PALM2Q8IXS6 379 aa8.83□□□□□ -1
HLA-B-258ENST00000640615 SIX5Q8N196 739 aa8.83□□□□□ -1
HLA-B-258ENST00000640615 AGGF1Q8N302 714 aaeCLIP8.83□□□□□ -1
HLA-B-258ENST00000640615 MPP5Q8N3R9 675 aa8.83□□□□□ -1
HLA-B-258ENST00000640615 IL17RCQ8NAC3 791 aa8.83□□□□□ -1
HLA-B-258ENST00000640615 TXNDC5Q8NBS9 432 aaKnown RBP8.83□□□□□ -1
HLA-B-258ENST00000640615 FBXO36Q8NEA4 188 aa8.83□□□□□ -1
HLA-B-258ENST00000640615 PYROXD1Q8WU10 500 aa8.83□□□□□ -1
HLA-B-258ENST00000640615 UBLCP1Q8WVY7 318 aaPredicted RBP8.83□□□□□ -1
HLA-B-258ENST00000640615 LRRC39Q96DD0 335 aa8.83□□□□□ -1
HLA-B-258ENST00000640615 STAMBPL1Q96FJ0 436 aa8.83□□□□□ -1
HLA-B-258ENST00000640615 CFAP36Q96G28 342 aa8.83□□□□□ -1
HLA-B-258ENST00000640615 LRIG1Q96JA1 1093 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms