RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-229ENST00000639953 RHBDF2Q6PJF5 856 aa6.25□□□□□ -1.41
ATM-229ENST00000639953 MFSD7Q6UXD7 560 aa6.25□□□□□ -1.41
ATM-229ENST00000639953 LRRC31Q6UY01 552 aa6.25□□□□□ -1.41
ATM-229ENST00000639953 TMEM184AQ6ZMB5 413 aa6.25□□□□□ -1.41
ATM-229ENST00000639953 USP51Q70EK9 711 aa6.25□□□□□ -1.41
ATM-229ENST00000639953 ENOSF1Q7L5Y1 443 aa6.25□□□□□ -1.41
ATM-229ENST00000639953 DPH6Q7L8W6 267 aa6.25□□□□□ -1.41
ATM-229ENST00000639953 IFT20Q8IY31 132 aa6.25□□□□□ -1.41
ATM-229ENST00000639953 SYCE1Q8N0S2 351 aa6.25□□□□□ -1.41
ATM-229ENST00000639953 MREGQ8N565 214 aa6.25□□□□□ -1.41
ATM-229ENST00000639953 C12orf29Q8N999 325 aa6.25□□□□□ -1.41
ATM-229ENST00000639953 SMRP1Q8NCR6 262 aa6.25□□□□□ -1.41
ATM-229ENST00000639953 APPL2Q8NEU8 664 aa6.25□□□□□ -1.41
ATM-229ENST00000639953 NDRG1Q92597 394 aaKnown RBP6.25□□□□□ -1.41
ATM-229ENST00000639953 CASP10Q92851 521 aa6.25□□□□□ -1.41
ATM-229ENST00000639953 MAGOHBQ96A72 148 aaKnown RBP6.25□□□□□ -1.41
ATM-229ENST00000639953 HPDLQ96IR7 371 aa6.25□□□□□ -1.41
ATM-229ENST00000639953 TSPAN18Q96SJ8 248 aa6.25□□□□□ -1.41
ATM-229ENST00000639953 RTP3Q9BQQ7 232 aa6.25□□□□□ -1.41
ATM-229ENST00000639953 CARD9Q9H257 536 aa6.25□□□□□ -1.41
ATM-229ENST00000639953 VIPAS39Q9H9C1 493 aa6.25□□□□□ -1.41
ATM-229ENST00000639953 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.25□□□□□ -1.41
ATM-229ENST00000639953 CDC42EP3Q9UKI2 254 aa6.25□□□□□ -1.41
ATM-229ENST00000639953 SSX2IPQ9Y2D8 614 aa6.25□□□□□ -1.41
ATM-229ENST00000639953 MSRB2Q9Y3D2 182 aa6.25□□□□□ -1.41
ATM-229ENST00000639953 USP15Q9Y4E8 981 aaPredicted RBP6.25□□□□□ -1.41
ATM-229ENST00000639953 SNX9Q9Y5X1 595 aa6.25□□□□□ -1.41
ATM-229ENST00000639953 ATP23Q9Y6H3 246 aa6.25□□□□□ -1.41
ATM-229ENST00000639953 DOCK6Q96HP0 2047 aa6.25□□□□□ -1.41
ATM-229ENST00000639953 MUC3AQ02505 3323 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 DENND4AQ7Z401 1863 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 CCDC195A0A1B0GUA6 201 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 ERICH4A6NGS2 130 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 H7C4K7 107 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 OVOL3O00110 214 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 WNT9AO14904 365 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 CCL16O15467 120 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 SPOPO43791 374 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 ATP2C2O75185 946 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 SOAT2O75908 522 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 CLSTN1O94985 981 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 SEC24AO95486 1093 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 VNN2O95498 520 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 CCDC172P0C7W6 258 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 SRGAP2BP0DMP2 458 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 RALAP11233 206 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 ACAT1P24752 427 aaKnown RBP6.24□□□□□ -1.41
ATM-229ENST00000639953 LMO2P25791 158 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 PNPLA4P41247 253 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 GPD2P43304 727 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 RGS7P49802 495 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 TNNC1P63316 161 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 TUBB4BP68371 445 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 NTHL1P78549 312 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 ROR1Q01973 937 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 CREMQ03060 361 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 ZNF844Q08AG5 666 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 SOWAHAQ2M3V2 549 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 SLC39A12Q504Y0 691 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 ZNF280DQ6N043 979 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 MAMDC2Q7Z304 686 aaPredicted RBP6.24□□□□□ -1.41
ATM-229ENST00000639953 USP37Q86T82 979 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 LRRTM3Q86VH5 581 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 TTC30AQ86WT1 665 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 ZNF677Q86XU0 584 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 XYLT1Q86Y38 959 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 TXLNBQ8N3L3 684 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 LRRC52Q8N7C0 313 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 OR10T2Q8NGX3 314 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 SLC7A14Q8TBB6 771 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 FAM71BQ8TC56 605 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 FBXO25Q8TCJ0 367 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 CLEC4CQ8WTT0 213 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 KBTBD7Q8WVZ9 684 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 ZNF669Q96BR6 464 aaPredicted RBP6.24□□□□□ -1.41
ATM-229ENST00000639953 ZNF503Q96F45 646 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 ZNF560Q96MR9 790 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 PGLYRP2Q96PD5 576 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 ERP44Q9BS26 406 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 DDX23Q9BUQ8 820 aaKnown RBP6.24□□□□□ -1.41
ATM-229ENST00000639953 ZDHHC5Q9C0B5 715 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 C12orf65Q9H3J6 166 aaKnown RBP6.24□□□□□ -1.41
ATM-229ENST00000639953 POMKQ9H5K3 350 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 SLITRK6Q9H5Y7 841 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 FAM204AQ9H8W3 233 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 TMBIM4Q9HC24 238 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 TMLHEQ9NVH6 421 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 DNAJC17Q9NVM6 304 aaKnown RBP6.24□□□□□ -1.41
ATM-229ENST00000639953 GPATCH2LQ9NWQ4 482 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 GDAP2Q9NXN4 497 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 GALNT8Q9NY28 637 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 CALCOCO1Q9P1Z2 691 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 UVRAGQ9P2Y5 699 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 SAE1Q9UBE0 346 aaPredicted RBP6.24□□□□□ -1.41
ATM-229ENST00000639953 PCYOX1Q9UHG3 505 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 FBXW11Q9UKB1 542 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 OAZ3Q9UMX2 235 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 PLAAQ9Y263 795 aa6.24□□□□□ -1.41
ATM-229ENST00000639953 NOTCH4Q99466 2003 aa6.23□□□□□ -1.41
ATM-229ENST00000639953 CCDC188H7C350 402 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms