RNA–Protein interactions for RNA: ENST00000639501.1

PMS1-222, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-222ENST00000639501 GPRC5DQ9NZD1 345 aa20.66■□□□□ 0.9
PMS1-222ENST00000639501 SOBPA7XYQ1 873 aa20.65■□□□□ 0.9
PMS1-222ENST00000639501 NME4O00746 187 aa20.65■□□□□ 0.9
PMS1-222ENST00000639501 NRP2O60462 931 aa20.65■□□□□ 0.9
PMS1-222ENST00000639501 NPHS1O60500 1241 aa20.65■□□□□ 0.9
PMS1-222ENST00000639501 SULT1C4O75897 302 aa20.65■□□□□ 0.9
PMS1-222ENST00000639501 DDNO94850 711 aaPredicted RBP20.65■□□□□ 0.9
PMS1-222ENST00000639501 PTPRAP18433 802 aa20.65■□□□□ 0.9
PMS1-222ENST00000639501 KCNC4Q03721 635 aa20.65■□□□□ 0.9
PMS1-222ENST00000639501 CYP2A13Q16696 494 aa20.65■□□□□ 0.9
PMS1-222ENST00000639501 EFCAB12Q6NXP0 572 aa20.65■□□□□ 0.9
PMS1-222ENST00000639501 ZNF280CQ8ND82 737 aa20.65■□□□□ 0.9
PMS1-222ENST00000639501 RPL10LQ96L21 214 aaKnown RBP20.65■□□□□ 0.9
PMS1-222ENST00000639501 HNRNPABQ99729 332 aaKnown RBP20.65■□□□□ 0.9
PMS1-222ENST00000639501 UPF3AQ9H1J1 476 aaKnown RBP20.65■□□□□ 0.9
PMS1-222ENST00000639501 CCM2LQ9NUG4 571 aaPredicted RBP20.65■□□□□ 0.9
PMS1-222ENST00000639501 ACOT9Q9Y305 439 aa20.65■□□□□ 0.9
PMS1-222ENST00000639501 ATP6AP2A0A1C7CYW4 349 aa20.65■□□□□ 0.9
PMS1-222ENST00000639501 ATP6AP2O75787 350 aa20.65■□□□□ 0.9
PMS1-222ENST00000639501 NFKB1P19838 968 aa20.65■□□□□ 0.9
PMS1-222ENST00000639501 MATN1P21941 496 aa20.65■□□□□ 0.9
PMS1-222ENST00000639501 TRAF2Q12933 501 aa20.65■□□□□ 0.9
PMS1-222ENST00000639501 PAFAH1B3Q15102 231 aaKnown RBP20.65■□□□□ 0.9
PMS1-222ENST00000639501 FAM45BPQ6NSW5 357 aa20.65■□□□□ 0.9
PMS1-222ENST00000639501 STRADAQ7RTN6 431 aa20.65■□□□□ 0.9
PMS1-222ENST00000639501 PIGZQ86VD9 579 aa20.65■□□□□ 0.9
PMS1-222ENST00000639501 CAMK1DQ8IU85 385 aa20.65■□□□□ 0.9
PMS1-222ENST00000639501 CMTR2Q8IYT2 770 aaKnown RBP20.65■□□□□ 0.9
PMS1-222ENST00000639501 SHCBP1Q8NEM2 672 aa20.65■□□□□ 0.9
PMS1-222ENST00000639501 FAM45AQ8TCE6 357 aa20.65■□□□□ 0.9
PMS1-222ENST00000639501 FAM167AQ96KS9 214 aa20.65■□□□□ 0.9
PMS1-222ENST00000639501 TRIM8Q9BZR9 551 aa20.65■□□□□ 0.9
PMS1-222ENST00000639501 MEAF6Q9HAF1 191 aa20.65■□□□□ 0.9
PMS1-222ENST00000639501 NCKIPSDQ9NZQ3 722 aa20.65■□□□□ 0.9
PMS1-222ENST00000639501 A0A0G2JMZ2 1700 aa20.65■□□□□ 0.9
PMS1-222ENST00000639501 LRRC37A2A6NM11 1700 aa20.65■□□□□ 0.9
PMS1-222ENST00000639501 NUP205Q92621 2012 aa20.65■□□□□ 0.9
PMS1-222ENST00000639501 CITO14578 2027 aa20.64■□□□□ 0.9
PMS1-222ENST00000639501 DCLK1O15075 740 aa20.64■□□□□ 0.9
PMS1-222ENST00000639501 NFATC3Q12968 1075 aa20.64■□□□□ 0.9
PMS1-222ENST00000639501 PPIL2Q13356 520 aa20.64■□□□□ 0.9
PMS1-222ENST00000639501 NR1D2Q14995 579 aa20.64■□□□□ 0.9
PMS1-222ENST00000639501 MAPRE2Q15555 327 aa20.64■□□□□ 0.9
PMS1-222ENST00000639501 CYHR1Q6ZMK1 362 aa20.64■□□□□ 0.9
PMS1-222ENST00000639501 FUNDC1Q8IVP5 155 aa20.64■□□□□ 0.9
PMS1-222ENST00000639501 NPWQ8N729 165 aa20.64■□□□□ 0.9
PMS1-222ENST00000639501 FAM149B1Q96BN6 582 aa20.64■□□□□ 0.9
PMS1-222ENST00000639501 RNF19AQ9NV58 838 aa20.64■□□□□ 0.9
PMS1-222ENST00000639501 RCOR3Q9P2K3 495 aaPredicted RBP20.64■□□□□ 0.9
PMS1-222ENST00000639501 RNF103-CHMP3A0A140T963 221 aa20.64■□□□□ 0.89
PMS1-222ENST00000639501 TMEM247A6NEH6 219 aa20.64■□□□□ 0.89
PMS1-222ENST00000639501 C9JVG2 144 aa20.64■□□□□ 0.89
PMS1-222ENST00000639501 EI24O14681 340 aa20.64■□□□□ 0.89
PMS1-222ENST00000639501 ACOX3O15254 700 aa20.64■□□□□ 0.89
PMS1-222ENST00000639501 PLK1P53350 603 aa20.64■□□□□ 0.89
PMS1-222ENST00000639501 TMEM53Q6P2H8 277 aa20.64■□□□□ 0.89
PMS1-222ENST00000639501 METTL7BQ6UX53 244 aa20.64■□□□□ 0.89
PMS1-222ENST00000639501 HEXDCQ8WVB3 486 aa20.64■□□□□ 0.89
PMS1-222ENST00000639501 KIF12Q96FN5 646 aa20.64■□□□□ 0.89
PMS1-222ENST00000639501 CORO1BQ9BR76 489 aa20.64■□□□□ 0.89
PMS1-222ENST00000639501 HACL1Q9UJ83 578 aa20.64■□□□□ 0.89
PMS1-222ENST00000639501 DHRS12A0PJE2 317 aa20.63■□□□□ 0.89
PMS1-222ENST00000639501 HTR3EA5X5Y0 456 aa20.63■□□□□ 0.89
PMS1-222ENST00000639501 CLOCKO15516 846 aa20.63■□□□□ 0.89
PMS1-222ENST00000639501 CDH3P22223 829 aa20.63■□□□□ 0.89
PMS1-222ENST00000639501 RAB10P61026 200 aa20.63■□□□□ 0.89
PMS1-222ENST00000639501 ATP6AP1Q15904 470 aa20.63■□□□□ 0.89
PMS1-222ENST00000639501 MOGQ16653 247 aa20.63■□□□□ 0.89
PMS1-222ENST00000639501 EGFLAMQ63HQ2 1017 aa20.63■□□□□ 0.89
PMS1-222ENST00000639501 PIWIL4Q7Z3Z4 852 aaKnown RBP20.63■□□□□ 0.89
PMS1-222ENST00000639501 PACRGLQ8N7B6 248 aa20.63■□□□□ 0.89
PMS1-222ENST00000639501 DNERQ8NFT8 737 aa20.63■□□□□ 0.89
PMS1-222ENST00000639501 TRPM4Q8TD43 1214 aa20.63■□□□□ 0.89
PMS1-222ENST00000639501 MRPL46Q9H2W6 279 aaKnown RBP20.63■□□□□ 0.89
PMS1-222ENST00000639501 FAM95CA0A1B0GW59 222 aa20.63■□□□□ 0.89
PMS1-222ENST00000639501 B4GAT1O43505 415 aa20.63■□□□□ 0.89
PMS1-222ENST00000639501 GAS2O43903 313 aaKnown RBP20.63■□□□□ 0.89
PMS1-222ENST00000639501 ARF4P18085 180 aaPredicted RBP20.63■□□□□ 0.89
PMS1-222ENST00000639501 CLEC6AQ6EIG7 209 aa20.63■□□□□ 0.89
PMS1-222ENST00000639501 FAM117BQ6P1L5 589 aa20.63■□□□□ 0.89
PMS1-222ENST00000639501 OR6B3Q8NGW1 331 aa20.63■□□□□ 0.89
PMS1-222ENST00000639501 GPR20Q99678 358 aa20.63■□□□□ 0.89
PMS1-222ENST00000639501 SLC25A23Q9BV35 468 aa20.63■□□□□ 0.89
PMS1-222ENST00000639501 GBA3Q9H227 469 aa20.63■□□□□ 0.89
PMS1-222ENST00000639501 LRRC4Q9HBW1 653 aa20.63■□□□□ 0.89
PMS1-222ENST00000639501 TCAF1Q9Y4C2 921 aa20.63■□□□□ 0.89
PMS1-222ENST00000639501 LOC285556D6RIA3 1793 aa20.62■□□□□ 0.89
PMS1-222ENST00000639501 EEF2KO00418 725 aaKnown RBP20.62■□□□□ 0.89
PMS1-222ENST00000639501 DYNC1LI2O43237 492 aaPredicted RBP20.62■□□□□ 0.89
PMS1-222ENST00000639501 TSPAN8P19075 237 aa20.62■□□□□ 0.89
PMS1-222ENST00000639501 HADHAP40939 763 aa20.62■□□□□ 0.89
PMS1-222ENST00000639501 MATKP42679 507 aa20.62■□□□□ 0.89
PMS1-222ENST00000639501 CCT8P50990 548 aa20.62■□□□□ 0.89
PMS1-222ENST00000639501 RAB15P59190 212 aa20.62■□□□□ 0.89
PMS1-222ENST00000639501 PLCL1Q15111 1095 aa20.62■□□□□ 0.89
PMS1-222ENST00000639501 NIPAL1Q6NVV3 410 aa20.62■□□□□ 0.89
PMS1-222ENST00000639501 GALNT18Q6P9A2 607 aa20.62■□□□□ 0.89
PMS1-222ENST00000639501 SIX6OS1Q8N1H7 587 aa20.62■□□□□ 0.89
PMS1-222ENST00000639501 SEPT8Q92599 483 aa20.62■□□□□ 0.89
PMS1-222ENST00000639501 SLC45A3Q96JT2 553 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms