RNA–Protein interactions for RNA: ENST00000638952.1

HNRNPU-217, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,678 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-217ENST00000638952 TGM3Q08188 693 aa17.33■□□□□ 0.36
HNRNPU-217ENST00000638952 SWI5Q1ZZU3 235 aa17.33■□□□□ 0.36
HNRNPU-217ENST00000638952 CHPFQ8IZ52 775 aa17.33■□□□□ 0.36
HNRNPU-217ENST00000638952 DHFRP00374 187 aa17.33■□□□□ 0.36
HNRNPU-217ENST00000638952 NELFEP18615 380 aaKnown RBP17.33■□□□□ 0.36
HNRNPU-217ENST00000638952 NFKB1P19838 968 aa17.33■□□□□ 0.36
HNRNPU-217ENST00000638952 RAB2AP61019 212 aa17.33■□□□□ 0.36
HNRNPU-217ENST00000638952 PSME3P61289 254 aa17.33■□□□□ 0.36
HNRNPU-217ENST00000638952 FUT2Q10981 343 aa17.33■□□□□ 0.36
HNRNPU-217ENST00000638952 CARTPTQ16568 116 aa17.33■□□□□ 0.36
HNRNPU-217ENST00000638952 OR5B17Q8NGF7 314 aa17.33■□□□□ 0.36
HNRNPU-217ENST00000638952 MCFD2Q8NI22 146 aa17.33■□□□□ 0.36
HNRNPU-217ENST00000638952 OMDQ99983 421 aa17.33■□□□□ 0.36
HNRNPU-217ENST00000638952 FAM50BQ9Y247 325 aa17.33■□□□□ 0.36
HNRNPU-217ENST00000638952 AP3M1Q9Y2T2 418 aa17.33■□□□□ 0.36
HNRNPU-217ENST00000638952 IFRD1O00458 451 aaPredicted RBP17.33■□□□□ 0.36
HNRNPU-217ENST00000638952 RGS14O43566 566 aa17.33■□□□□ 0.36
HNRNPU-217ENST00000638952 MYL9P24844 172 aa17.33■□□□□ 0.36
HNRNPU-217ENST00000638952 NOS2P35228 1153 aa17.33■□□□□ 0.36
HNRNPU-217ENST00000638952 NFE2Q16621 373 aaPredicted RBP17.33■□□□□ 0.36
HNRNPU-217ENST00000638952 NEPROQ6NW34 567 aa17.33■□□□□ 0.36
HNRNPU-217ENST00000638952 C10orf107Q8IVU9 208 aa17.33■□□□□ 0.36
HNRNPU-217ENST00000638952 PJA1Q8NG27 643 aa17.33■□□□□ 0.36
HNRNPU-217ENST00000638952 KCTD4Q8WVF5 259 aa17.33■□□□□ 0.36
HNRNPU-217ENST00000638952 USP7Q93009 1102 aa17.33■□□□□ 0.36
HNRNPU-217ENST00000638952 SERAC1Q96JX3 654 aa17.33■□□□□ 0.36
HNRNPU-217ENST00000638952 P2RX7Q99572 595 aaKnown RBP17.33■□□□□ 0.36
HNRNPU-217ENST00000638952 SENP6Q9GZR1 1112 aaPredicted RBP17.33■□□□□ 0.36
HNRNPU-217ENST00000638952 SSR3Q9UNL2 185 aa17.33■□□□□ 0.36
HNRNPU-217ENST00000638952 TCRBV9S1A1TA0A576 114 aa17.32■□□□□ 0.36
HNRNPU-217ENST00000638952 CCDC166P0CW27 439 aa17.32■□□□□ 0.36
HNRNPU-217ENST00000638952 OMPP47874 163 aa17.32■□□□□ 0.36
HNRNPU-217ENST00000638952 CBFBQ13951 182 aa17.32■□□□□ 0.36
HNRNPU-217ENST00000638952 UGCGQ16739 394 aa17.32■□□□□ 0.36
HNRNPU-217ENST00000638952 HGSNATQ68CP4 663 aa17.32■□□□□ 0.36
HNRNPU-217ENST00000638952 GPSM1Q86YR5 675 aa17.32■□□□□ 0.36
HNRNPU-217ENST00000638952 PTCD3Q96EY7 689 aaKnown RBP17.32■□□□□ 0.36
HNRNPU-217ENST00000638952 OR12D3Q9UGF7 316 aa17.32■□□□□ 0.36
HNRNPU-217ENST00000638952 MLXQ9UH92 298 aa17.32■□□□□ 0.36
HNRNPU-217ENST00000638952 ROBO3Q96MS0 1386 aa17.32■□□□□ 0.36
HNRNPU-217ENST00000638952 DNAJB2P25686 324 aa17.32■□□□□ 0.36
HNRNPU-217ENST00000638952 GPR15P49685 360 aa17.32■□□□□ 0.36
HNRNPU-217ENST00000638952 BOP1Q14137 746 aaKnown RBP17.32■□□□□ 0.36
HNRNPU-217ENST00000638952 DSN1Q9H410 356 aa17.32■□□□□ 0.36
HNRNPU-217ENST00000638952 ADARB2Q9NS39 739 aaKnown RBP17.32■□□□□ 0.36
HNRNPU-217ENST00000638952 ARL8BQ9NVJ2 186 aa17.32■□□□□ 0.36
HNRNPU-217ENST00000638952 CPA4Q9UI42 421 aa17.32■□□□□ 0.36
HNRNPU-217ENST00000638952 PRELID1Q9Y255 219 aa17.32■□□□□ 0.36
HNRNPU-217ENST00000638952 RGL2O15211 777 aa17.32■□□□□ 0.36
HNRNPU-217ENST00000638952 ALOX15BO15296 676 aa17.32■□□□□ 0.36
HNRNPU-217ENST00000638952 TRIM3O75382 744 aaPredicted RBP17.32■□□□□ 0.36
HNRNPU-217ENST00000638952 HLA-DQA2P01906 255 aa17.32■□□□□ 0.36
HNRNPU-217ENST00000638952 ITGA2BP08514 1039 aa17.32■□□□□ 0.36
HNRNPU-217ENST00000638952 CAPGP40121 348 aa17.32■□□□□ 0.36
HNRNPU-217ENST00000638952 SLC39A12Q504Y0 691 aa17.32■□□□□ 0.36
HNRNPU-217ENST00000638952 RAB43Q86YS6 212 aa17.32■□□□□ 0.36
HNRNPU-217ENST00000638952 SPATA6LQ8N4H0 392 aa17.32■□□□□ 0.36
HNRNPU-217ENST00000638952 FAM84AQ96KN4 292 aa17.32■□□□□ 0.36
HNRNPU-217ENST00000638952 RACGAP1Q9H0H5 632 aa17.32■□□□□ 0.36
HNRNPU-217ENST00000638952 SPON1Q9HCB6 807 aa17.32■□□□□ 0.36
HNRNPU-217ENST00000638952 MST1RQ04912 1400 aa17.32■□□□□ 0.36
HNRNPU-217ENST00000638952 RECQL4O94761 1208 aa17.32■□□□□ 0.36
HNRNPU-217ENST00000638952 AXLP30530 894 aa17.32■□□□□ 0.36
HNRNPU-217ENST00000638952 GABRB2P47870 512 aa17.32■□□□□ 0.36
HNRNPU-217ENST00000638952 TAF13Q15543 124 aa17.32■□□□□ 0.36
HNRNPU-217ENST00000638952 FAM187BQ17R55 369 aa17.32■□□□□ 0.36
HNRNPU-217ENST00000638952 BBS12Q6ZW61 710 aa17.32■□□□□ 0.36
HNRNPU-217ENST00000638952 CXXC5Q7LFL8 322 aaKnown RBP17.32■□□□□ 0.36
HNRNPU-217ENST00000638952 FAM220AQ7Z4H9 259 aa17.32■□□□□ 0.36
HNRNPU-217ENST00000638952 PIK3C3Q8NEB9 887 aa17.32■□□□□ 0.36
HNRNPU-217ENST00000638952 EBNA1BP2Q99848 306 aaKnown RBP17.32■□□□□ 0.36
HNRNPU-217ENST00000638952 TRIM38O00635 465 aa17.32■□□□□ 0.36
HNRNPU-217ENST00000638952 SNRPB2P08579 225 aaKnown RBP17.32■□□□□ 0.36
HNRNPU-217ENST00000638952 SLURP2P0DP57 97 aa17.32■□□□□ 0.36
HNRNPU-217ENST00000638952 RNF220Q5VTB9 566 aa17.32■□□□□ 0.36
HNRNPU-217ENST00000638952 TNS4Q8IZW8 715 aa17.32■□□□□ 0.36
HNRNPU-217ENST00000638952 IL31RAQ8NI17 732 aa17.32■□□□□ 0.36
HNRNPU-217ENST00000638952 LRRC20Q8TCA0 184 aa17.32■□□□□ 0.36
HNRNPU-217ENST00000638952 RGSL1A5PLK6 1076 aa17.31■□□□□ 0.36
HNRNPU-217ENST00000638952 STX16-NPEPL1H3BU86 382 aa17.31■□□□□ 0.36
HNRNPU-217ENST00000638952 STX16O14662 325 aa17.31■□□□□ 0.36
HNRNPU-217ENST00000638952 GOT1P17174 413 aa17.31■□□□□ 0.36
HNRNPU-217ENST00000638952 BTN3A2P78410 334 aa17.31■□□□□ 0.36
HNRNPU-217ENST00000638952 SMCO1Q147U7 214 aa17.31■□□□□ 0.36
HNRNPU-217ENST00000638952 DSG4Q86SJ6 1040 aa17.31■□□□□ 0.36
HNRNPU-217ENST00000638952 DEPDC4Q8N2C3 294 aa17.31■□□□□ 0.36
HNRNPU-217ENST00000638952 CDK5RAP1Q96SZ6 601 aaKnown RBP17.31■□□□□ 0.36
HNRNPU-217ENST00000638952 ACO2Q99798 780 aaKnown RBP17.31■□□□□ 0.36
HNRNPU-217ENST00000638952 CAB39LQ9H9S4 337 aa17.31■□□□□ 0.36
HNRNPU-217ENST00000638952 OGDHLQ9ULD0 1010 aa17.31■□□□□ 0.36
HNRNPU-217ENST00000638952 MTF2Q9Y483 593 aaPredicted RBP17.31■□□□□ 0.36
HNRNPU-217ENST00000638952 WFS1O76024 890 aa17.31■□□□□ 0.36
HNRNPU-217ENST00000638952 NAA20P61599 178 aa17.31■□□□□ 0.36
HNRNPU-217ENST00000638952 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.31■□□□□ 0.363e-8■■□□□ 12.3
HNRNPU-217ENST00000638952 HAVCR1Q96D42 359 aa17.31■□□□□ 0.36
HNRNPU-217ENST00000638952 ELOVL4Q9GZR5 314 aa17.31■□□□□ 0.36
HNRNPU-217ENST00000638952 PRDM16Q9HAZ2 1276 aa17.31■□□□□ 0.36
HNRNPU-217ENST00000638952 SPAG4Q9NPE6 437 aa17.31■□□□□ 0.36
HNRNPU-217ENST00000638952 PCDHAC2Q9Y5I4 1007 aa17.31■□□□□ 0.36
HNRNPU-217ENST00000638952 LGR5O75473 907 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms