RNA–Protein interactions for RNA: ENST00000638939.1

PDE4D-229, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-229ENST00000638939 LMO7DNF2Z398 122 aa5.58□□□□□ -1.52
PDE4D-229ENST00000638939 FPGTO14772 594 aa5.58□□□□□ -1.52
PDE4D-229ENST00000638939 RAD51BO15315 384 aa5.58□□□□□ -1.52
PDE4D-229ENST00000638939 SPINT1O43278 529 aa5.58□□□□□ -1.52
PDE4D-229ENST00000638939 TSPAN6O43657 245 aa5.58□□□□□ -1.52
PDE4D-229ENST00000638939 GADD45BO75293 160 aaPredicted RBP5.58□□□□□ -1.52
PDE4D-229ENST00000638939 LSM8O95777 96 aaKnown RBP5.58□□□□□ -1.52
PDE4D-229ENST00000638939 GSRP00390 522 aa5.58□□□□□ -1.52
PDE4D-229ENST00000638939 TFE3P19532 575 aaPredicted RBP5.58□□□□□ -1.52
PDE4D-229ENST00000638939 TGM2P21980 687 aa5.58□□□□□ -1.52
PDE4D-229ENST00000638939 RBMS1P29558 406 aaKnown RBP5.58□□□□□ -1.52
PDE4D-229ENST00000638939 OR1E1P30953 314 aa5.58□□□□□ -1.52
PDE4D-229ENST00000638939 KRT9P35527 623 aa5.58□□□□□ -1.52
PDE4D-229ENST00000638939 IGFALSP35858 605 aa5.58□□□□□ -1.52
PDE4D-229ENST00000638939 GABRB2P47870 512 aa5.58□□□□□ -1.52
PDE4D-229ENST00000638939 SULT1E1P49888 294 aa5.58□□□□□ -1.52
PDE4D-229ENST00000638939 IDH3AP50213 366 aa5.58□□□□□ -1.52
PDE4D-229ENST00000638939 WDR4P57081 412 aaKnown RBP5.58□□□□□ -1.52
PDE4D-229ENST00000638939 GEMIN4P57678 1058 aaKnown RBP5.58□□□□□ -1.52
PDE4D-229ENST00000638939 NRG1Q02297 640 aaPredicted RBP5.58□□□□□ -1.52
PDE4D-229ENST00000638939 DEUP1Q05D60 604 aa5.58□□□□□ -1.52
PDE4D-229ENST00000638939 EIF3IQ13347 325 aaKnown RBP5.58□□□□□ -1.52
PDE4D-229ENST00000638939 PDE1CQ14123 709 aaPredicted RBP5.58□□□□□ -1.52
PDE4D-229ENST00000638939 PTK2BQ14289 1009 aa5.58□□□□□ -1.52
PDE4D-229ENST00000638939 CDKN3Q16667 212 aa5.58□□□□□ -1.52
PDE4D-229ENST00000638939 EXOC3L4Q17RC7 722 aa5.58□□□□□ -1.52
PDE4D-229ENST00000638939 ARHGAP40Q5TG30 622 aa5.58□□□□□ -1.52
PDE4D-229ENST00000638939 MANEALQ5VSG8 457 aa5.58□□□□□ -1.52
PDE4D-229ENST00000638939 GJB7Q6PEY0 223 aa5.58□□□□□ -1.52
PDE4D-229ENST00000638939 LINGO4Q6UY18 593 aa5.58□□□□□ -1.52
PDE4D-229ENST00000638939 MACC1Q6ZN28 852 aa5.58□□□□□ -1.52
PDE4D-229ENST00000638939 GBP6Q6ZN66 633 aa5.58□□□□□ -1.52
PDE4D-229ENST00000638939 EFL1Q7Z2Z2 1120 aaKnown RBP5.58□□□□□ -1.52
PDE4D-229ENST00000638939 FAM71AQ8IYT1 594 aa5.58□□□□□ -1.52
PDE4D-229ENST00000638939 ARL14Q8N4G2 192 aa5.58□□□□□ -1.52
PDE4D-229ENST00000638939 MED8Q96G25 268 aa5.58□□□□□ -1.52
PDE4D-229ENST00000638939 ATXN7L3BQ96GX2 97 aa5.58□□□□□ -1.52
PDE4D-229ENST00000638939 LIN37Q96GY3 246 aaPredicted RBP5.58□□□□□ -1.52
PDE4D-229ENST00000638939 NAF1Q96HR8 494 aaKnown RBP5.58□□□□□ -1.52
PDE4D-229ENST00000638939 SLC46A1Q96NT5 459 aa5.58□□□□□ -1.52
PDE4D-229ENST00000638939 HAPLN3Q96S86 360 aa5.58□□□□□ -1.52
PDE4D-229ENST00000638939 HEPHQ9BQS7 1158 aa5.58□□□□□ -1.52
PDE4D-229ENST00000638939 LRRC61Q9BV99 259 aa5.58□□□□□ -1.52
PDE4D-229ENST00000638939 C1QTNF7Q9BXJ2 289 aa5.58□□□□□ -1.52
PDE4D-229ENST00000638939 OSBPL1AQ9BXW6 950 aa5.58□□□□□ -1.52
PDE4D-229ENST00000638939 SLC17A9Q9BYT1 436 aa5.58□□□□□ -1.52
PDE4D-229ENST00000638939 SEMA4CQ9C0C4 833 aa5.58□□□□□ -1.52
PDE4D-229ENST00000638939 ZYG11BQ9C0D3 744 aa5.58□□□□□ -1.52
PDE4D-229ENST00000638939 SIK2Q9H0K1 926 aa5.58□□□□□ -1.52
PDE4D-229ENST00000638939 TNKS2Q9H2K2 1166 aa5.58□□□□□ -1.52
PDE4D-229ENST00000638939 RETREG1Q9H6L5 497 aa5.58□□□□□ -1.52
PDE4D-229ENST00000638939 SYNCQ9H7C4 482 aa5.58□□□□□ -1.52
PDE4D-229ENST00000638939 ATP13A1Q9HD20 1204 aa5.58□□□□□ -1.52
PDE4D-229ENST00000638939 SIX2Q9NPC8 291 aa5.58□□□□□ -1.52
PDE4D-229ENST00000638939 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.58□□□□□ -1.52
PDE4D-229ENST00000638939 MPP6Q9NZW5 540 aa5.58□□□□□ -1.52
PDE4D-229ENST00000638939 PPARGC1AQ9UBK2 798 aaKnown RBP5.58□□□□□ -1.52
PDE4D-229ENST00000638939 SPASTQ9UBP0 616 aa5.58□□□□□ -1.52
PDE4D-229ENST00000638939 APOBEC3BQ9UH17 382 aaKnown RBP5.58□□□□□ -1.52
PDE4D-229ENST00000638939 KLF15Q9UIH9 416 aa5.58□□□□□ -1.52
PDE4D-229ENST00000638939 RWDD2AQ9UIY3 292 aa5.58□□□□□ -1.52
PDE4D-229ENST00000638939 ACSL6Q9UKU0 697 aa5.58□□□□□ -1.52
PDE4D-229ENST00000638939 ATXN7L1Q9ULK2 861 aaPredicted RBP5.58□□□□□ -1.52
PDE4D-229ENST00000638939 NEU3Q9UQ49 428 aa5.58□□□□□ -1.52
PDE4D-229ENST00000638939 PCDHGA7Q9Y5G6 932 aa5.58□□□□□ -1.52
PDE4D-229ENST00000638939 USP9YO00507 2555 aaPredicted RBP5.58□□□□□ -1.52
PDE4D-229ENST00000638939 USP9XQ93008 2570 aaPredicted RBP5.58□□□□□ -1.52
PDE4D-229ENST00000638939 A0A1B0GTH6 734 aa5.57□□□□□ -1.52
PDE4D-229ENST00000638939 TTC24A2A3L6 582 aaPredicted RBP5.57□□□□□ -1.52
PDE4D-229ENST00000638939 C16orf96A6NNT2 1141 aa5.57□□□□□ -1.52
PDE4D-229ENST00000638939 D6RAR5 112 aa5.57□□□□□ -1.52
PDE4D-229ENST00000638939 NTN3O00634 580 aaPredicted RBP5.57□□□□□ -1.52
PDE4D-229ENST00000638939 AREL1O15033 823 aa5.57□□□□□ -1.52
PDE4D-229ENST00000638939 CD160O95971 181 aa5.57□□□□□ -1.52
PDE4D-229ENST00000638939 MYF5P13349 255 aa5.57□□□□□ -1.52
PDE4D-229ENST00000638939 EDN3P14138 238 aa5.57□□□□□ -1.52
PDE4D-229ENST00000638939 SLC9A1P19634 815 aa5.57□□□□□ -1.52
PDE4D-229ENST00000638939 PON1P27169 355 aa5.57□□□□□ -1.52
PDE4D-229ENST00000638939 FLT3P36888 993 aa5.57□□□□□ -1.52
PDE4D-229ENST00000638939 USP8P40818 1118 aa5.57□□□□□ -1.52
PDE4D-229ENST00000638939 MAPKAPK2P49137 400 aa5.57□□□□□ -1.52
PDE4D-229ENST00000638939 THOP1P52888 689 aa5.57□□□□□ -1.52
PDE4D-229ENST00000638939 STX17P56962 302 aa5.57□□□□□ -1.52
PDE4D-229ENST00000638939 BPIFB4P59827 614 aa5.57□□□□□ -1.52
PDE4D-229ENST00000638939 YPEL5P62699 121 aa5.57□□□□□ -1.52
PDE4D-229ENST00000638939 GNA12Q03113 381 aa5.57□□□□□ -1.52
PDE4D-229ENST00000638939 EIF2B5Q13144 721 aaKnown RBP5.57□□□□□ -1.52
PDE4D-229ENST00000638939 SGCGQ13326 291 aa5.57□□□□□ -1.52
PDE4D-229ENST00000638939 SPIDRQ14159 915 aa5.57□□□□□ -1.52
PDE4D-229ENST00000638939 ARHGAP44Q17R89 818 aa5.57□□□□□ -1.52
PDE4D-229ENST00000638939 DEFB133Q30KQ1 61 aa5.57□□□□□ -1.52
PDE4D-229ENST00000638939 ZNF805Q5CZA5 627 aa5.57□□□□□ -1.52
PDE4D-229ENST00000638939 ZNF542PQ5EBM4 170 aa5.57□□□□□ -1.52
PDE4D-229ENST00000638939 CARD16Q5EG05 197 aa5.57□□□□□ -1.52
PDE4D-229ENST00000638939 PERM1Q5SV97 790 aa5.57□□□□□ -1.52
PDE4D-229ENST00000638939 TPRG1LQ5T0D9 272 aa5.57□□□□□ -1.52
PDE4D-229ENST00000638939 FAM102AQ5T9C2 384 aaPredicted RBP5.57□□□□□ -1.52
PDE4D-229ENST00000638939 ISM2Q6H9L7 571 aa5.57□□□□□ -1.52
PDE4D-229ENST00000638939 TRNP1Q6NT89 227 aa5.57□□□□□ -1.52
PDE4D-229ENST00000638939 SLC47A2Q86VL8 602 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms