RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 TAF4O00268 1085 aa17.89■□□□□ 0.45
PNKP-230ENST00000638016 FPGTO14772 594 aa17.89■□□□□ 0.45
PNKP-230ENST00000638016 PEX11BO96011 259 aa17.89■□□□□ 0.45
PNKP-230ENST00000638016 CAPNS1P04632 268 aa17.89■□□□□ 0.45
PNKP-230ENST00000638016 ARL4AP40617 200 aa17.89■□□□□ 0.45
PNKP-230ENST00000638016 TAS2R40P59535 323 aa17.89■□□□□ 0.45
PNKP-230ENST00000638016 PFN3P60673 137 aa17.89■□□□□ 0.45
PNKP-230ENST00000638016 IL10RBQ08334 325 aa17.89■□□□□ 0.45
PNKP-230ENST00000638016 EIF2B5Q13144 721 aaKnown RBP17.89■□□□□ 0.45
PNKP-230ENST00000638016 UGP2Q16851 508 aa17.89■□□□□ 0.45
PNKP-230ENST00000638016 ASTE1Q2TB18 679 aaPredicted RBP17.89■□□□□ 0.45
PNKP-230ENST00000638016 PROX2Q3B8N5 592 aa17.89■□□□□ 0.45
PNKP-230ENST00000638016 BOLA3Q53S33 107 aa17.89■□□□□ 0.45
PNKP-230ENST00000638016 SPECC1LQ69YQ0 1117 aa17.89■□□□□ 0.45
PNKP-230ENST00000638016 TMCO3Q6UWJ1 677 aa17.89■□□□□ 0.45
PNKP-230ENST00000638016 RBFAQ8N0V3 343 aa17.89■□□□□ 0.45
PNKP-230ENST00000638016 PGBD5Q8N414 524 aa17.89■□□□□ 0.45
PNKP-230ENST00000638016 TP53I13Q8NBR0 393 aaPredicted RBP17.89■□□□□ 0.45
PNKP-230ENST00000638016 MDM1Q8TC05 714 aa17.89■□□□□ 0.45
PNKP-230ENST00000638016 IQCDQ96DY2 449 aa17.89■□□□□ 0.45
PNKP-230ENST00000638016 LENG8Q96PV6 779 aaPredicted RBP17.89■□□□□ 0.45
PNKP-230ENST00000638016 DNAJC7Q99615 494 aa17.89■□□□□ 0.45
PNKP-230ENST00000638016 CHP1Q99653 195 aa17.89■□□□□ 0.45
PNKP-230ENST00000638016 DONSONQ9NYP3 566 aa17.89■□□□□ 0.45
PNKP-230ENST00000638016 MYLKQ15746 1914 aa17.89■□□□□ 0.45
PNKP-230ENST00000638016 ACACAQ13085 2346 aa17.88■□□□□ 0.45
PNKP-230ENST00000638016 SPTY2D1-AS1A0A0U1RR47 76 aa17.88■□□□□ 0.45
PNKP-230ENST00000638016 RFPL3O75679 317 aa17.88■□□□□ 0.45
PNKP-230ENST00000638016 TM7SF2O76062 418 aa17.88■□□□□ 0.45
PNKP-230ENST00000638016 MAP3K6O95382 1288 aa17.88■□□□□ 0.45
PNKP-230ENST00000638016 XPAP23025 273 aaPredicted RBP17.88■□□□□ 0.45
PNKP-230ENST00000638016 IL4RP24394 825 aa17.88■□□□□ 0.45
PNKP-230ENST00000638016 ADKP55263 362 aaKnown RBP17.88■□□□□ 0.45
PNKP-230ENST00000638016 CDH6P55285 790 aa17.88■□□□□ 0.45
PNKP-230ENST00000638016 LBRQ14739 615 aaKnown RBP17.88■□□□□ 0.45
PNKP-230ENST00000638016 IRF4Q15306 451 aa17.88■□□□□ 0.45
PNKP-230ENST00000638016 SMAD1Q15797 465 aaKnown RBP17.88■□□□□ 0.45
PNKP-230ENST00000638016 TMEM52BQ4KMG9 183 aa17.88■□□□□ 0.45
PNKP-230ENST00000638016 VSTM4Q8IW00 320 aa17.88■□□□□ 0.45
PNKP-230ENST00000638016 DENND6BQ8NEG7 585 aa17.88■□□□□ 0.45
PNKP-230ENST00000638016 LRRN4Q8WUT4 740 aa17.88■□□□□ 0.45
PNKP-230ENST00000638016 TEKT4Q8WW24 435 aa17.88■□□□□ 0.45
PNKP-230ENST00000638016 SPTLC3Q9NUV7 552 aa17.88■□□□□ 0.45
PNKP-230ENST00000638016 CTTNBP2NLQ9P2B4 639 aa17.88■□□□□ 0.45
PNKP-230ENST00000638016 RALYQ9UKM9 306 aaKnown RBP17.88■□□□□ 0.45
PNKP-230ENST00000638016 PKD1L2Q7Z442 2459 aa17.88■□□□□ 0.45
PNKP-230ENST00000638016 TMEM110-MUSTN1A8MSY1 372 aa17.87■□□□□ 0.45
PNKP-230ENST00000638016 A8MX80 341 aa17.87■□□□□ 0.45
PNKP-230ENST00000638016 MYO1FO00160 1098 aa17.87■□□□□ 0.45
PNKP-230ENST00000638016 RIOK3O14730 519 aaKnown RBP17.87■□□□□ 0.45
PNKP-230ENST00000638016 MFSD11O43934 449 aa17.87■□□□□ 0.45
PNKP-230ENST00000638016 MAFKO60675 156 aa17.87■□□□□ 0.45
PNKP-230ENST00000638016 TPM3P06753 285 aa17.87■□□□□ 0.45
PNKP-230ENST00000638016 C6P13671 934 aa17.87■□□□□ 0.45
PNKP-230ENST00000638016 RABIFP47224 123 aa17.87■□□□□ 0.45
PNKP-230ENST00000638016 SCNN1BP51168 640 aa17.87■□□□□ 0.45
PNKP-230ENST00000638016 ARSEP51690 589 aa17.87■□□□□ 0.45
PNKP-230ENST00000638016 MAXP61244 160 aa17.87■□□□□ 0.45
PNKP-230ENST00000638016 RALGDSQ12967 914 aa17.87■□□□□ 0.45
PNKP-230ENST00000638016 KRT81Q14533 505 aa17.87■□□□□ 0.45
PNKP-230ENST00000638016 SLC18A3Q16572 532 aa17.87■□□□□ 0.45
PNKP-230ENST00000638016 WSCD2Q2TBF2 565 aa17.87■□□□□ 0.45
PNKP-230ENST00000638016 FAM182AQ5T1J6 154 aa17.87■□□□□ 0.45
PNKP-230ENST00000638016 TMCO4Q5TGY1 634 aa17.87■□□□□ 0.45
PNKP-230ENST00000638016 PARGQ86W56 976 aa17.87■□□□□ 0.45
PNKP-230ENST00000638016 ZNF548Q8NEK5 533 aaPredicted RBP17.87■□□□□ 0.45
PNKP-230ENST00000638016 OR8K1Q8NGG5 319 aa17.87■□□□□ 0.45
PNKP-230ENST00000638016 ASB12Q8WXK4 309 aa17.87■□□□□ 0.45
PNKP-230ENST00000638016 ABHD10Q9NUJ1 306 aa17.87■□□□□ 0.45
PNKP-230ENST00000638016 ATP8A1Q9Y2Q0 1164 aa17.87■□□□□ 0.45
PNKP-230ENST00000638016 ASXL3Q9C0F0 2248 aa17.87■□□□□ 0.45
PNKP-230ENST00000638016 LY6G6EA0A0G2JKS1 128 aa17.86■□□□□ 0.45
PNKP-230ENST00000638016 SRRM3A6NNA2 597 aaPredicted RBP17.86■□□□□ 0.45
PNKP-230ENST00000638016 SCAMP1O15126 338 aa17.86■□□□□ 0.45
PNKP-230ENST00000638016 CBFA2T2O43439 604 aa17.86■□□□□ 0.45
PNKP-230ENST00000638016 MFAP3LO75121 409 aa17.86■□□□□ 0.45
PNKP-230ENST00000638016 NME1P15531 152 aaKnown RBP17.86■□□□□ 0.45
PNKP-230ENST00000638016 CKMT2P17540 419 aa17.86■□□□□ 0.45
PNKP-230ENST00000638016 MMP12P39900 470 aa17.86■□□□□ 0.45
PNKP-230ENST00000638016 CSNK1DP48730 415 aa17.86■□□□□ 0.45
PNKP-230ENST00000638016 LIG3P49916 1009 aa17.86■□□□□ 0.45
PNKP-230ENST00000638016 ZNF135P52742 658 aaPredicted RBP17.86■□□□□ 0.45
PNKP-230ENST00000638016 CAMK2BQ13554 666 aa17.86■□□□□ 0.45
PNKP-230ENST00000638016 PTPRRQ15256 657 aa17.86■□□□□ 0.45
PNKP-230ENST00000638016 TCEA2Q15560 299 aa17.86■□□□□ 0.45
PNKP-230ENST00000638016 CFAP58Q5T655 872 aa17.86■□□□□ 0.45
PNKP-230ENST00000638016 KCTD16Q68DU8 428 aa17.86■□□□□ 0.45
PNKP-230ENST00000638016 OR4C6Q8NH72 309 aa17.86■□□□□ 0.45
PNKP-230ENST00000638016 ECHDC3Q96DC8 303 aa17.86■□□□□ 0.45
PNKP-230ENST00000638016 ZNF641Q96N77 438 aaPredicted RBP17.86■□□□□ 0.45
PNKP-230ENST00000638016 PSKH2Q96QS6 385 aa17.86■□□□□ 0.45
PNKP-230ENST00000638016 TUBGCP5Q96RT8 1024 aa17.86■□□□□ 0.45
PNKP-230ENST00000638016 ATP13A3Q9H7F0 1226 aa17.86■□□□□ 0.45
PNKP-230ENST00000638016 SEPT3Q9UH03 358 aa17.86■□□□□ 0.45
PNKP-230ENST00000638016 PCDHGA1Q9Y5H4 931 aa17.86■□□□□ 0.45
PNKP-230ENST00000638016 U3KQA8 63 aa17.86■□□□□ 0.45
PNKP-230ENST00000638016 LRP4O75096 1905 aa17.86■□□□□ 0.45
PNKP-230ENST00000638016 TMEM8BA6NDV4 472 aa17.85■□□□□ 0.45
PNKP-230ENST00000638016 TRAFD1O14545 582 aaPredicted RBP17.85■□□□□ 0.45
PNKP-230ENST00000638016 PROSCO94903 275 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms