RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 NPEPPSL1A6NEC2 478 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 NPIPB15A6NHN6 443 aaPredicted RBP3.06□□□□□ -1.92
VIM-210ENST00000637053 ZNF716A6NP11 495 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 PATE3B3GLJ2 98 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 H0Y8G0 127 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 PDLIM1O00151 329 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 POLRMTO00411 1230 aaKnown RBP3.06□□□□□ -1.92
VIM-210ENST00000637053 FCHO1O14526 889 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 DYNC1I1O14576 645 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 MEIS2O14770 477 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 NKRFO15226 690 aaKnown RBP eCLIP3.06□□□□□ -1.92
VIM-210ENST00000637053 OGTO15294 1046 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 PRPF4O43172 522 aaKnown RBP eCLIP3.06□□□□□ -1.92
VIM-210ENST00000637053 SURF6O75683 361 aaKnown RBP3.06□□□□□ -1.92
VIM-210ENST00000637053 RHBDL1O75783 438 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 CIB2O75838 187 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 ATP5HO75947 161 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 NEBLO76041 1014 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 SPDEFO95238 335 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 PDE8BO95263 885 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 CCNDBP1O95273 360 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 DDAH2O95865 285 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 ONECUT2O95948 504 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 FTLP02792 175 aaPredicted RBP3.06□□□□□ -1.92
VIM-210ENST00000637053 ANXA1P04083 346 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 NTRK1P04629 796 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 FESP07332 822 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 FHP07954 510 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 FAM86B2P0C5J1 330 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 ZNF735P0CB33 412 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 PABPC4LP0CB38 370 aaKnown RBP3.06□□□□□ -1.92
VIM-210ENST00000637053 ERVK-10P10266 1014 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 ODC1P11926 461 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 APEHP13798 732 aaKnown RBP3.06□□□□□ -1.92
VIM-210ENST00000637053 SLC9A1P19634 815 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 CYP2A7P20853 494 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 SAT1P21673 171 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 AHCYP23526 432 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 MSNP26038 577 aaKnown RBP3.06□□□□□ -1.92
VIM-210ENST00000637053 PSMA5P28066 241 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 AVPR2P30518 371 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 CORO1AP31146 461 aaKnown RBP3.06□□□□□ -1.92
VIM-210ENST00000637053 ETV5P41161 510 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 ARHGAP25P42331 645 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 CCR10P46092 362 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 SELENOPP49908 381 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 SUMO3P55854 103 aaPredicted RBP3.06□□□□□ -1.92
VIM-210ENST00000637053 NME5P56597 212 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 CORO7P57737 925 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 GFPT1Q06210 699 aaPredicted RBP3.06□□□□□ -1.92
VIM-210ENST00000637053 NIPAL4Q0D2K0 466 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 OVGP1Q12889 678 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 CSTF3Q12996 717 aaKnown RBP3.06□□□□□ -1.92
VIM-210ENST00000637053 LCP2Q13094 533 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 NOGQ13253 232 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 PPIL2Q13356 520 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 ROCK1Q13464 1354 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 TOB2Q14106 344 aaPredicted RBP3.06□□□□□ -1.92
VIM-210ENST00000637053 DMC1Q14565 340 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 CASP8Q14790 479 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 HERC3Q15034 1050 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 KRT31Q15323 416 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 NTRK2Q16620 822 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 MOGQ16653 247 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 FSCN1Q16658 493 aaKnown RBP3.06□□□□□ -1.92
VIM-210ENST00000637053 PRICKLE4Q2TBC4 344 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 KRTAP15-1Q3LI76 137 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 CCDC157Q569K6 752 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 RAB41Q5JT25 222 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 PRR31Q5SQ13 230 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 C10orf120Q5SQS8 335 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 HEPHL1Q6MZM0 1159 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 TIGD7Q6NT04 549 aaPredicted RBP3.06□□□□□ -1.92
VIM-210ENST00000637053 INO80CQ6PI98 192 aaPredicted RBP3.06□□□□□ -1.92
VIM-210ENST00000637053 CRELD2Q6UXH1 353 aaPredicted RBP3.06□□□□□ -1.92
VIM-210ENST00000637053 ZNF852Q6ZMS4 543 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 MSANTD1Q6ZTZ1 278 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 ZNF365Q70YC5 407 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 KRT28Q7Z3Y7 464 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 ANKS1BQ7Z6G8 1248 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 PLEKHH3Q7Z736 793 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 CABP7Q86V35 215 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 SRRM1Q8IYB3 904 aaKnown RBP3.06□□□□□ -1.92
VIM-210ENST00000637053 LRRC34Q8IZ02 419 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 ELMOD2Q8IZ81 293 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 PYROXD2Q8N2H3 581 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 KDM8Q8N371 416 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 CSGALNACT2Q8N6G5 542 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 KDM1BQ8NB78 822 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 GLIS1Q8NBF1 620 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 ATAD1Q8NBU5 361 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 CCDC150Q8NCX0 1101 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 SETD9Q8NE22 299 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 SLC24A4Q8NFF2 622 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 BBS1Q8NFJ9 593 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 NLGN2Q8NFZ4 835 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 OR6Y1Q8NGX8 325 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 NFKBIDQ8NI38 313 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 SCAMP5Q8TAC9 235 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms