RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 MGME1Q9BQP7 344 aa8.3□□□□□ -1.08
PNKP-226ENST00000636840 SLC17A9Q9BYT1 436 aa8.3□□□□□ -1.08
PNKP-226ENST00000636840 NOD2Q9HC29 1040 aa8.3□□□□□ -1.08
PNKP-226ENST00000636840 TMEM74BQ9NUR3 256 aa8.3□□□□□ -1.08
PNKP-226ENST00000636840 TRHDEQ9UKU6 1024 aa8.3□□□□□ -1.08
PNKP-226ENST00000636840 DNPEPQ9ULA0 475 aa8.3□□□□□ -1.08
PNKP-226ENST00000636840 PHTF1Q9UMS5 762 aa8.3□□□□□ -1.08
PNKP-226ENST00000636840 FADS3Q9Y5Q0 445 aa8.3□□□□□ -1.08
PNKP-226ENST00000636840 HS3ST3A1Q9Y663 406 aa8.3□□□□□ -1.08
PNKP-226ENST00000636840 EML5Q05BV3 1969 aa8.3□□□□□ -1.08
PNKP-226ENST00000636840 PLXND1Q9Y4D7 1925 aa8.29□□□□□ -1.08
PNKP-226ENST00000636840 KNL1Q8NG31 2342 aa8.29□□□□□ -1.08
PNKP-226ENST00000636840 CFAP69A5D8W1 941 aa8.29□□□□□ -1.08
PNKP-226ENST00000636840 UPK3BL1B0FP48 263 aa8.29□□□□□ -1.08
PNKP-226ENST00000636840 UPK3BL2E5RIL1 263 aa8.29□□□□□ -1.08
PNKP-226ENST00000636840 KCNK1O00180 336 aa8.29□□□□□ -1.08
PNKP-226ENST00000636840 ARHGAP33O14559 1287 aa8.29□□□□□ -1.08
PNKP-226ENST00000636840 SLC31A1O15431 190 aa8.29□□□□□ -1.08
PNKP-226ENST00000636840 LATO43561 262 aa8.29□□□□□ -1.08
PNKP-226ENST00000636840 LZTS3O60299 673 aaPredicted RBP8.29□□□□□ -1.08
PNKP-226ENST00000636840 TM7SF2O76062 418 aa8.29□□□□□ -1.08
PNKP-226ENST00000636840 PIGNO95427 931 aa8.29□□□□□ -1.08
PNKP-226ENST00000636840 PEX11BO96011 259 aa8.29□□□□□ -1.08
PNKP-226ENST00000636840 PAK4O96013 591 aaPredicted RBP8.29□□□□□ -1.08
PNKP-226ENST00000636840 PYGMP11217 842 aa8.29□□□□□ -1.08
PNKP-226ENST00000636840 HNRNPA2B1P22626 353 aaKnown RBP8.29□□□□□ -1.08
PNKP-226ENST00000636840 MAT2AP31153 395 aaKnown RBP8.29□□□□□ -1.08
PNKP-226ENST00000636840 GRIA4P48058 902 aa8.29□□□□□ -1.08
PNKP-226ENST00000636840 MARCKSL1P49006 195 aa8.29□□□□□ -1.08
PNKP-226ENST00000636840 CSNK1EP49674 416 aaKnown RBP8.29□□□□□ -1.08
PNKP-226ENST00000636840 METAP1P53582 386 aa8.29□□□□□ -1.08
PNKP-226ENST00000636840 MAXP61244 160 aa8.29□□□□□ -1.08
PNKP-226ENST00000636840 IRX4P78413 519 aa8.29□□□□□ -1.08
PNKP-226ENST00000636840 ARHGEF7Q14155 803 aa8.29□□□□□ -1.08
PNKP-226ENST00000636840 SUZ12Q15022 739 aaKnown RBP8.29□□□□□ -1.08
PNKP-226ENST00000636840 SF3A2Q15428 464 aaKnown RBP8.29□□□□□ -1.08
PNKP-226ENST00000636840 MEI1Q5TIA1 1274 aa8.29□□□□□ -1.08
PNKP-226ENST00000636840 NAPEPLDQ6IQ20 393 aa8.29□□□□□ -1.08
PNKP-226ENST00000636840 DARS2Q6PI48 645 aaKnown RBP8.29□□□□□ -1.08
PNKP-226ENST00000636840 USP45Q70EL2 814 aa8.29□□□□□ -1.08
PNKP-226ENST00000636840 ZC3H18Q86VM9 953 aaKnown RBP8.29□□□□□ -1.08
PNKP-226ENST00000636840 IQCHQ86VS3 1027 aa8.29□□□□□ -1.08
PNKP-226ENST00000636840 DCP2Q8IU60 420 aaKnown RBP8.29□□□□□ -1.08
PNKP-226ENST00000636840 CDKL3Q8IVW4 592 aaPredicted RBP8.29□□□□□ -1.08
PNKP-226ENST00000636840 ZCCHC9Q8N567 271 aaKnown RBP8.29□□□□□ -1.08
PNKP-226ENST00000636840 MFSD2AQ8NA29 543 aa8.29□□□□□ -1.08
PNKP-226ENST00000636840 NETO1Q8TDF5 533 aa8.29□□□□□ -1.08
PNKP-226ENST00000636840 HTR3CQ8WXA8 447 aa8.29□□□□□ -1.08
PNKP-226ENST00000636840 ASB12Q8WXK4 309 aa8.29□□□□□ -1.08
PNKP-226ENST00000636840 KLHDC7BQ96G42 594 aa8.29□□□□□ -1.08
PNKP-226ENST00000636840 PDLIM2Q96JY6 352 aa8.29□□□□□ -1.08
PNKP-226ENST00000636840 PPP1R2P1Q96PQ5 205 aa8.29□□□□□ -1.08
PNKP-226ENST00000636840 SRPK1Q96SB4 655 aaKnown RBP8.29□□□□□ -1.08
PNKP-226ENST00000636840 IL12RB2Q99665 862 aa8.29□□□□□ -1.08
PNKP-226ENST00000636840 GTPBP2Q9BX10 602 aaKnown RBP8.29□□□□□ -1.08
PNKP-226ENST00000636840 ADGRE3Q9BY15 652 aa8.29□□□□□ -1.08
PNKP-226ENST00000636840 FRMD8P1Q9BZ68 369 aaPredicted RBP8.29□□□□□ -1.08
PNKP-226ENST00000636840 TM9SF3Q9HD45 589 aa8.29□□□□□ -1.08
PNKP-226ENST00000636840 TMEM9BQ9NQ34 198 aa8.29□□□□□ -1.08
PNKP-226ENST00000636840 SAE1Q9UBE0 346 aaPredicted RBP8.29□□□□□ -1.08
PNKP-226ENST00000636840 CDV3Q9UKY7 258 aaKnown RBP8.29□□□□□ -1.08
PNKP-226ENST00000636840 PACSIN2Q9UNF0 486 aaPredicted RBP8.29□□□□□ -1.08
PNKP-226ENST00000636840 ATP8A1Q9Y2Q0 1164 aa8.29□□□□□ -1.08
PNKP-226ENST00000636840 PCDHB9Q9Y5E1 797 aa8.29□□□□□ -1.08
PNKP-226ENST00000636840 PCDHGC4Q9Y5F7 938 aa8.29□□□□□ -1.08
PNKP-226ENST00000636840 CEP192Q8TEP8 1941 aa8.29□□□□□ -1.08
PNKP-226ENST00000636840 ATXN2Q99700 1313 aaKnown RBP8.29□□□□□ -1.08
PNKP-226ENST00000636840 MUC22E2RYF6 1773 aaPredicted RBP8.28□□□□□ -1.08
PNKP-226ENST00000636840 VPS13AQ96RL7 3174 aa8.28□□□□□ -1.08
PNKP-226ENST00000636840 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.28□□□□□ -1.08
PNKP-226ENST00000636840 TSPAN11A1L157 253 aa8.28□□□□□ -1.08
PNKP-226ENST00000636840 GOLGA6CA6NDK9 693 aa8.28□□□□□ -1.08
PNKP-226ENST00000636840 GOLGA6BA6NDN3 693 aa8.28□□□□□ -1.08
PNKP-226ENST00000636840 IGLON5A6NGN9 336 aa8.28□□□□□ -1.08
PNKP-226ENST00000636840 KCNK3O14649 394 aa8.28□□□□□ -1.08
PNKP-226ENST00000636840 TOR1BO14657 336 aa8.28□□□□□ -1.08
PNKP-226ENST00000636840 RIOK3O14730 519 aaKnown RBP8.28□□□□□ -1.08
PNKP-226ENST00000636840 FPGTO14772 594 aa8.28□□□□□ -1.08
PNKP-226ENST00000636840 AREL1O15033 823 aa8.28□□□□□ -1.08
PNKP-226ENST00000636840 MUSKO15146 869 aa8.28□□□□□ -1.08
PNKP-226ENST00000636840 VILLO15195 856 aa8.28□□□□□ -1.08
PNKP-226ENST00000636840 DDX3YO15523 660 aaKnown RBP8.28□□□□□ -1.08
PNKP-226ENST00000636840 HTRA2O43464 458 aaPredicted RBP8.28□□□□□ -1.08
PNKP-226ENST00000636840 KIF5CO60282 957 aa8.28□□□□□ -1.08
PNKP-226ENST00000636840 MMP20O60882 483 aa8.28□□□□□ -1.08
PNKP-226ENST00000636840 OPHN1O60890 802 aa8.28□□□□□ -1.08
PNKP-226ENST00000636840 CER1O95813 267 aa8.28□□□□□ -1.08
PNKP-226ENST00000636840 CPP00450 1065 aa8.28□□□□□ -1.08
PNKP-226ENST00000636840 IGHV4-34P06331 123 aa8.28□□□□□ -1.08
PNKP-226ENST00000636840 GOLGA6DP0CG33 693 aa8.28□□□□□ -1.08
PNKP-226ENST00000636840 RBP3P10745 1247 aa8.28□□□□□ -1.08
PNKP-226ENST00000636840 ENGP17813 658 aa8.28□□□□□ -1.08
PNKP-226ENST00000636840 CR2P20023 1033 aa8.28□□□□□ -1.08
PNKP-226ENST00000636840 TGM1P22735 817 aa8.28□□□□□ -1.08
PNKP-226ENST00000636840 STIP1P31948 543 aaKnown RBP8.28□□□□□ -1.08
PNKP-226ENST00000636840 ACTN2P35609 894 aa8.28□□□□□ -1.08
PNKP-226ENST00000636840 RGRP47804 291 aa8.28□□□□□ -1.08
PNKP-226ENST00000636840 TAS2R38P59533 333 aa8.28□□□□□ -1.08
PNKP-226ENST00000636840 EIF3EP60228 445 aaKnown RBP8.28□□□□□ -1.08
PNKP-226ENST00000636840 RPL26P61254 145 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms