RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 ZNF599Q96NL3 588 aa19.14■□□□□ 0.65
CLN6-213ENST00000636212 NUP85Q9BW27 656 aa19.14■□□□□ 0.65
CLN6-213ENST00000636212 USP29Q9HBJ7 922 aa19.14■□□□□ 0.65
CLN6-213ENST00000636212 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.14■□□□□ 0.65
CLN6-213ENST00000636212 NCKIPSDQ9NZQ3 722 aa19.14■□□□□ 0.65
CLN6-213ENST00000636212 CSNK1G3Q9Y6M4 447 aa19.14■□□□□ 0.65
CLN6-213ENST00000636212 TSPAN11A1L157 253 aa19.13■□□□□ 0.65
CLN6-213ENST00000636212 MYO1FO00160 1098 aa19.13■□□□□ 0.65
CLN6-213ENST00000636212 RIOK3O14730 519 aaKnown RBP19.13■□□□□ 0.65
CLN6-213ENST00000636212 SPINT1O43278 529 aa19.13■□□□□ 0.65
CLN6-213ENST00000636212 TPM1P09493 284 aa19.13■□□□□ 0.65
CLN6-213ENST00000636212 JUNDP17535 347 aa19.13■□□□□ 0.65
CLN6-213ENST00000636212 NSUN2Q08J23 767 aaKnown RBP eCLIP19.13■□□□□ 0.65
CLN6-213ENST00000636212 DPYSQ14117 519 aa19.13■□□□□ 0.65
CLN6-213ENST00000636212 KRT81Q14533 505 aa19.13■□□□□ 0.65
CLN6-213ENST00000636212 ZNF235Q14590 738 aa19.13■□□□□ 0.65
CLN6-213ENST00000636212 LRRC14Q15048 493 aa19.13■□□□□ 0.65
CLN6-213ENST00000636212 TSR1Q2NL82 804 aaKnown RBP19.13■□□□□ 0.65
CLN6-213ENST00000636212 CYP4V2Q6ZWL3 525 aaPredicted RBP19.13■□□□□ 0.65
CLN6-213ENST00000636212 MARCH9Q86YJ5 346 aa19.13■□□□□ 0.65
CLN6-213ENST00000636212 ARHGAP12Q8IWW6 846 aa19.13■□□□□ 0.65
CLN6-213ENST00000636212 NIPA2Q8N8Q9 360 aa19.13■□□□□ 0.65
CLN6-213ENST00000636212 TSEN2Q8NCE0 465 aaKnown RBP19.13■□□□□ 0.65
CLN6-213ENST00000636212 VOPP1Q96AW1 172 aa19.13■□□□□ 0.65
CLN6-213ENST00000636212 CENPTQ96BT3 561 aa19.13■□□□□ 0.65
CLN6-213ENST00000636212 NXPE2Q96DL1 559 aa19.13■□□□□ 0.65
CLN6-213ENST00000636212 PCDH12Q9NPG4 1184 aa19.13■□□□□ 0.65
CLN6-213ENST00000636212 SPASTQ9UBP0 616 aa19.13■□□□□ 0.65
CLN6-213ENST00000636212 DKK4Q9UBT3 224 aa19.13■□□□□ 0.65
CLN6-213ENST00000636212 SEPT3Q9UH03 358 aa19.13■□□□□ 0.65
CLN6-213ENST00000636212 USP24Q9UPU5 2620 aa19.13■□□□□ 0.65
CLN6-213ENST00000636212 PLXNB3Q9ULL4 1909 aa19.12■□□□□ 0.65
CLN6-213ENST00000636212 A0A087X0T9 212 aa19.12■□□□□ 0.65
CLN6-213ENST00000636212 TMEM110-MUSTN1A8MSY1 372 aa19.12■□□□□ 0.65
CLN6-213ENST00000636212 AQP9O43315 295 aa19.12■□□□□ 0.65
CLN6-213ENST00000636212 LZTS3O60299 673 aaPredicted RBP19.12■□□□□ 0.65
CLN6-213ENST00000636212 FAM228BP0C875 321 aa19.12■□□□□ 0.65
CLN6-213ENST00000636212 CKMT1AP12532 417 aa19.12■□□□□ 0.65
CLN6-213ENST00000636212 NFKBIAP25963 317 aa19.12■□□□□ 0.65
CLN6-213ENST00000636212 CASP14P31944 242 aa19.12■□□□□ 0.65
CLN6-213ENST00000636212 IGFALSP35858 605 aa19.12■□□□□ 0.65
CLN6-213ENST00000636212 HSPA9P38646 679 aaKnown RBP19.12■□□□□ 0.65
CLN6-213ENST00000636212 AP1S1P61966 158 aa19.12■□□□□ 0.65
CLN6-213ENST00000636212 CYP4F3Q08477 520 aa19.12■□□□□ 0.65
CLN6-213ENST00000636212 TRIM14Q14142 442 aa19.12■□□□□ 0.65
CLN6-213ENST00000636212 LBRQ14739 615 aaKnown RBP19.12■□□□□ 0.65
CLN6-213ENST00000636212 POLNQ7Z5Q5 900 aa19.12■□□□□ 0.65
CLN6-213ENST00000636212 CAMK1DQ8IU85 385 aa19.12■□□□□ 0.65
CLN6-213ENST00000636212 NPWQ8N729 165 aa19.12■□□□□ 0.65
CLN6-213ENST00000636212 ZNF548Q8NEK5 533 aaPredicted RBP19.12■□□□□ 0.65
CLN6-213ENST00000636212 ATL2Q8NHH9 583 aa19.12■□□□□ 0.65
CLN6-213ENST00000636212 LMX1AQ8TE12 382 aa19.12■□□□□ 0.65
CLN6-213ENST00000636212 GLMNQ92990 594 aa19.12■□□□□ 0.65
CLN6-213ENST00000636212 APOLD1Q96LR9 279 aa19.12■□□□□ 0.65
CLN6-213ENST00000636212 IL12RB2Q99665 862 aa19.12■□□□□ 0.65
CLN6-213ENST00000636212 SLC13A1Q9BZW2 595 aa19.12■□□□□ 0.65
CLN6-213ENST00000636212 APOBEC3BQ9UH17 382 aaKnown RBP19.12■□□□□ 0.65
CLN6-213ENST00000636212 ATP8A1Q9Y2Q0 1164 aa19.12■□□□□ 0.65
CLN6-213ENST00000636212 FRYQ5TBA9 3013 aa19.11■□□□□ 0.65
CLN6-213ENST00000636212 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.11■□□□□ 0.65
CLN6-213ENST00000636212 CAPNS1P04632 268 aa19.11■□□□□ 0.65
CLN6-213ENST00000636212 GYPCP04921 128 aa19.11■□□□□ 0.65
CLN6-213ENST00000636212 CYP1A2P05177 515 aa19.11■□□□□ 0.65
CLN6-213ENST00000636212 RARAP10276 462 aa19.11■□□□□ 0.65
CLN6-213ENST00000636212 ITIH2P19823 946 aa19.11■□□□□ 0.65
CLN6-213ENST00000636212 AMPD1P23109 780 aa19.11■□□□□ 0.65
CLN6-213ENST00000636212 IL1R2P27930 398 aa19.11■□□□□ 0.65
CLN6-213ENST00000636212 HTR1BP28222 390 aa19.11■□□□□ 0.65
CLN6-213ENST00000636212 EIF4A3P38919 411 aaKnown RBP19.11■□□□□ 0.65
CLN6-213ENST00000636212 SCNN1BP51168 640 aa19.11■□□□□ 0.65
CLN6-213ENST00000636212 BLKP51451 505 aa19.11■□□□□ 0.65
CLN6-213ENST00000636212 TARDBPQ13148 414 aaKnown RBP eCLIP19.11■□□□□ 0.65
CLN6-213ENST00000636212 CAMK2BQ13554 666 aa19.11■□□□□ 0.65
CLN6-213ENST00000636212 FAXCQ5TGI0 409 aa19.11■□□□□ 0.65
CLN6-213ENST00000636212 ZCCHC8Q6NZY4 707 aaKnown RBP19.11■□□□□ 0.65
CLN6-213ENST00000636212 MACC1Q6ZN28 852 aa19.11■□□□□ 0.65
CLN6-213ENST00000636212 FAM181AQ8N9Y4 354 aa19.11■□□□□ 0.65
CLN6-213ENST00000636212 TP53I13Q8NBR0 393 aaPredicted RBP19.11■□□□□ 0.65
CLN6-213ENST00000636212 CSPG4P5Q96PW8 444 aa19.11■□□□□ 0.65
CLN6-213ENST00000636212 PSKH2Q96QS6 385 aa19.11■□□□□ 0.65
CLN6-213ENST00000636212 XPO4Q9C0E2 1151 aaKnown RBP19.11■□□□□ 0.65
CLN6-213ENST00000636212 ABCG4Q9H172 646 aa19.11■□□□□ 0.65
CLN6-213ENST00000636212 DEF6Q9H4E7 631 aa19.11■□□□□ 0.65
CLN6-213ENST00000636212 ZNHIT6Q9NWK9 470 aaKnown RBP19.11■□□□□ 0.65
CLN6-213ENST00000636212 LCMT1Q9UIC8 334 aa19.11■□□□□ 0.65
CLN6-213ENST00000636212 CLCA2Q9UQC9 943 aa19.11■□□□□ 0.65
CLN6-213ENST00000636212 A0A1W2PQ67 120 aa19.1■□□□□ 0.65
CLN6-213ENST00000636212 K7ESM1 405 aa19.1■□□□□ 0.65
CLN6-213ENST00000636212 TAF4O00268 1085 aa19.1■□□□□ 0.65
CLN6-213ENST00000636212 BUB1BO60566 1050 aaPredicted RBP19.1■□□□□ 0.65
CLN6-213ENST00000636212 NEBLO76041 1014 aa19.1■□□□□ 0.65
CLN6-213ENST00000636212 C6P13671 934 aa19.1■□□□□ 0.65
CLN6-213ENST00000636212 LIG3P49916 1009 aa19.1■□□□□ 0.65
CLN6-213ENST00000636212 PEX5P50542 639 aa19.1■□□□□ 0.65
CLN6-213ENST00000636212 CDH6P55285 790 aa19.1■□□□□ 0.65
CLN6-213ENST00000636212 IRF4Q15306 451 aa19.1■□□□□ 0.65
CLN6-213ENST00000636212 ARHGAP36Q6ZRI8 547 aa19.1■□□□□ 0.65
CLN6-213ENST00000636212 CACTIN-AS1Q8N1I8 211 aa19.1■□□□□ 0.65
CLN6-213ENST00000636212 ATPAF2Q8N5M1 289 aa19.1■□□□□ 0.65
CLN6-213ENST00000636212 ZNF564Q8TBZ8 553 aaPredicted RBP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms