RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 MTHFSDQ2M296 383 aaKnown RBP6.05□□□□□ -1.44
SCN1A-212ENST00000636194 KCTD8Q6ZWB6 473 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 HID1Q8IV36 788 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 LRRC20Q8TCA0 184 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 C1orf54Q8WWF1 131 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 NSMCE3Q96MG7 304 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 DCUN1D5Q9BTE7 237 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 MIR1-1HGQ9H1L0 117 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 ATXN10Q9UBB4 475 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 MORF4L1Q9UBU8 362 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 APEX2Q9UBZ4 518 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 WASF2Q9Y6W5 498 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 CDC42BPBQ9Y5S2 1711 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 TBC1D3BA6NDS4 549 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 PLK4O00444 970 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 NOS1APO75052 506 aaPredicted RBP6.05□□□□□ -1.44
SCN1A-212ENST00000636194 UGT2B17O75795 530 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 SLC34A2O95436 690 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 IFNA2P01563 188 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 GNSP15586 552 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 SLC6A2P23975 617 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 IL6STP40189 918 aaPredicted RBP6.05□□□□□ -1.44
SCN1A-212ENST00000636194 CDK8P49336 464 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 CASP9P55211 416 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 TAS2R50P59544 299 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 SEC23AQ15436 765 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 XKR3Q5GH77 459 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 PIK3R6Q5UE93 754 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 FBXO39Q8N4B4 442 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 SGF29Q96ES7 293 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 FNDC11Q9BVV2 318 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 ALG13Q9NP73 1137 aaKnown RBP6.05□□□□□ -1.44
SCN1A-212ENST00000636194 CDH9Q9ULB4 789 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 CPSF1Q10570 1443 aaKnown RBP6.05□□□□□ -1.44
SCN1A-212ENST00000636194 CLDN4O14493 209 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 UBDO15205 165 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 SCN2BO60939 215 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 CTSHP09668 335 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 TMEM253P0C7T8 217 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 EPORP19235 508 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 VARSP26640 1264 aaKnown RBP6.05□□□□□ -1.44
SCN1A-212ENST00000636194 ALDH4A1P30038 563 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 RPS9P46781 194 aaKnown RBP6.05□□□□□ -1.44
SCN1A-212ENST00000636194 CAMK2DQ13557 499 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 BCL2A1Q16548 175 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 TBRG1Q3YBR2 411 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 TCHHL1Q5QJ38 904 aaPredicted RBP6.05□□□□□ -1.44
SCN1A-212ENST00000636194 TBCELQ5QJ74 424 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 AGBL2Q5U5Z8 902 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 C5orf34Q96MH7 638 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 C7orf50Q9BRJ6 194 aaKnown RBP6.05□□□□□ -1.44
SCN1A-212ENST00000636194 LIMD1Q9UGP4 676 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 ERBB3P21860 1342 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 LRRIQ1Q96JM4 1722 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 ANKRD34BA5PLL1 514 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 SAGP10523 405 aaPredicted RBP6.05□□□□□ -1.44
SCN1A-212ENST00000636194 NR2F6P10588 404 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 CRATP43155 626 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 ZNF135P52742 658 aaPredicted RBP6.05□□□□□ -1.44
SCN1A-212ENST00000636194 TSPAN5P62079 268 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 COASYQ13057 564 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 CBWD6Q4V339 395 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 LZTR1Q8N653 840 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 OVCA2Q8WZ82 227 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 RAD54LQ92698 747 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 CLIC6Q96NY7 704 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 MMADHCQ9H3L0 296 aaPredicted RBP6.05□□□□□ -1.44
SCN1A-212ENST00000636194 ABCD2Q9UBJ2 740 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 HEY2Q9UBP5 337 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 ATG2BQ96BY7 2078 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 MAP3K1Q13233 1512 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 MYOM2P54296 1465 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 CBX4O00257 560 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 TSPAN4O14817 238 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 FTH1P02794 183 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 FESP07332 822 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 PGAM1P18669 254 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 BUD31P41223 144 aaPredicted RBP6.05□□□□□ -1.44
SCN1A-212ENST00000636194 ARPC4P59998 168 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 RAPSNQ13702 412 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 SLC15A2Q16348 729 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 ZNF549Q6P9A3 640 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 SMIM15Q7Z3B0 74 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 TMC7Q7Z402 723 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 GLT6D1Q7Z4J2 308 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 TCAIMQ8N3R3 496 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 GPAMQ9HCL2 828 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 HACL1Q9UJ83 578 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 POFUT2Q9Y2G5 429 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 COL17A1Q9UMD9 1497 aaPredicted RBP6.05□□□□□ -1.44
SCN1A-212ENST00000636194 CACNA1DQ01668 2161 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 KIAA2026Q5HYC2 2103 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 FGF19O95750 216 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 CPA1P15085 419 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 DGKAP23743 735 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 HOXC9P31274 260 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 S100A3P33764 101 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 ARCN1P48444 511 aaKnown RBP6.05□□□□□ -1.44
SCN1A-212ENST00000636194 GNA12Q03113 381 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 FRRS1Q6ZNA5 592 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms