RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-238	ENST00000635997	NAF1	Q96HR8	494 aa	Known RBP	14.42	□□□□□ -0.1
NEDD4L-238	ENST00000635997	COPS7B	Q9H9Q2	264 aa	Predicted RBP	14.42	□□□□□ -0.1
NEDD4L-238	ENST00000635997	EFCAB1	Q9HAE3	211 aa		14.42	□□□□□ -0.1
NEDD4L-238	ENST00000635997	C2CD4B	A6NLJ0	364 aa		14.42	□□□□□ -0.1
NEDD4L-238	ENST00000635997	SCAMP1	O15126	338 aa		14.42	□□□□□ -0.1
NEDD4L-238	ENST00000635997	TM9SF1	O15321	606 aa		14.42	□□□□□ -0.1
NEDD4L-238	ENST00000635997	SERPINE1	P05121	402 aa		14.42	□□□□□ -0.1
NEDD4L-238	ENST00000635997	NQO1	P15559	274 aa	Known RBP	14.42	□□□□□ -0.1
NEDD4L-238	ENST00000635997	ZNF135	P52742	658 aa	Predicted RBP	14.42	□□□□□ -0.1
NEDD4L-238	ENST00000635997	ELF3	P78545	371 aa	Predicted RBP	14.42	□□□□□ -0.1
NEDD4L-238	ENST00000635997	SKOR1	P84550	965 aa		14.42	□□□□□ -0.1
NEDD4L-238	ENST00000635997	MTA1	Q13330	715 aa		14.42	□□□□□ -0.1
NEDD4L-238	ENST00000635997	NFYC	Q13952	458 aa		14.42	□□□□□ -0.1
NEDD4L-238	ENST00000635997	PRCC	Q92733	491 aa	Predicted RBP	14.42	□□□□□ -0.1
NEDD4L-238	ENST00000635997	LRRC39	Q96DD0	335 aa		14.42	□□□□□ -0.1
NEDD4L-238	ENST00000635997	TMEM237	Q96Q45	408 aa		14.42	□□□□□ -0.1
NEDD4L-238	ENST00000635997	STX18	Q9P2W9	335 aa	Known RBP	14.42	□□□□□ -0.1
NEDD4L-238	ENST00000635997	DNAJC25-GNG10	A0A024R161	153 aa		14.42	□□□□□ -0.1
NEDD4L-238	ENST00000635997		F8W810	466 aa		14.42	□□□□□ -0.1
NEDD4L-238	ENST00000635997	FFAR3	O14843	346 aa		14.42	□□□□□ -0.1
NEDD4L-238	ENST00000635997	GPR42	O15529	346 aa		14.42	□□□□□ -0.1
NEDD4L-238	ENST00000635997	DSC2	Q02487	901 aa		14.42	□□□□□ -0.1
NEDD4L-238	ENST00000635997	ATP6AP1L	Q52LC2	224 aa		14.42	□□□□□ -0.1
NEDD4L-238	ENST00000635997	C16orf89	Q6UX73	402 aa		14.42	□□□□□ -0.1
NEDD4L-238	ENST00000635997	ST13P4	Q8IZP2	240 aa	Predicted RBP	14.42	□□□□□ -0.1
NEDD4L-238	ENST00000635997	TMEM130	Q8N3G9	435 aa		14.42	□□□□□ -0.1
NEDD4L-238	ENST00000635997	MFSD3	Q96ES6	412 aa		14.42	□□□□□ -0.1
NEDD4L-238	ENST00000635997	CYP2S1	Q96SQ9	504 aa		14.42	□□□□□ -0.1
NEDD4L-238	ENST00000635997	GLOD4	Q9HC38	313 aa		14.42	□□□□□ -0.1
NEDD4L-238	ENST00000635997		E9PAM4	449 aa		14.42	□□□□□ -0.1
NEDD4L-238	ENST00000635997	MRPS35	P82673	323 aa	Known RBP	14.42	□□□□□ -0.1
NEDD4L-238	ENST00000635997	GRM2	Q14416	872 aa		14.42	□□□□□ -0.1
NEDD4L-238	ENST00000635997	LRRC73	Q5JTD7	316 aa		14.42	□□□□□ -0.1
NEDD4L-238	ENST00000635997	HFE2	Q6ZVN8	426 aa		14.42	□□□□□ -0.1
NEDD4L-238	ENST00000635997	EFL1	Q7Z2Z2	1120 aa	Known RBP	14.42	□□□□□ -0.1
NEDD4L-238	ENST00000635997	MILR1	Q7Z6M3	343 aa		14.42	□□□□□ -0.1
NEDD4L-238	ENST00000635997	GPSM1	Q86YR5	675 aa		14.42	□□□□□ -0.1
NEDD4L-238	ENST00000635997	LRRC57	Q8N9N7	239 aa		14.42	□□□□□ -0.1
NEDD4L-238	ENST00000635997	SNRNP27	Q8WVK2	155 aa	Known RBP	14.42	□□□□□ -0.1
NEDD4L-238	ENST00000635997	DNAJC9	Q8WXX5	260 aa		14.42	□□□□□ -0.1
NEDD4L-238	ENST00000635997	ELMO1	Q92556	727 aa		14.42	□□□□□ -0.1
NEDD4L-238	ENST00000635997	PGM2	Q96G03	612 aa		14.42	□□□□□ -0.1
NEDD4L-238	ENST00000635997	MECR	Q9BV79	373 aa		14.42	□□□□□ -0.1
NEDD4L-238	ENST00000635997	POMK	Q9H5K3	350 aa		14.42	□□□□□ -0.1
NEDD4L-238	ENST00000635997	PCDHGC3	Q9UN70	934 aa		14.42	□□□□□ -0.1
NEDD4L-238	ENST00000635997	PTPRJ	Q12913	1337 aa		14.41	□□□□□ -0.1
NEDD4L-238	ENST00000635997	CIT	O14578	2027 aa		14.41	□□□□□ -0.1
NEDD4L-238	ENST00000635997	FCHO1	O14526	889 aa		14.41	□□□□□ -0.1
NEDD4L-238	ENST00000635997	GRK3	P35626	688 aa		14.41	□□□□□ -0.1
NEDD4L-238	ENST00000635997	UBE3A	Q05086	875 aa		14.41	□□□□□ -0.1
NEDD4L-238	ENST00000635997	MARK4	Q96L34	752 aa		14.41	□□□□□ -0.1
NEDD4L-238	ENST00000635997	CIDEB	Q9UHD4	219 aa		14.41	□□□□□ -0.1
NEDD4L-238	ENST00000635997	SNX5	Q9Y5X3	404 aa		14.41	□□□□□ -0.1
NEDD4L-238	ENST00000635997	RAD51B	O15315	384 aa		14.41	□□□□□ -0.1
NEDD4L-238	ENST00000635997	ADAMTS4	O75173	837 aa		14.41	□□□□□ -0.1
NEDD4L-238	ENST00000635997	CYP1A1	P04798	512 aa	Predicted RBP	14.41	□□□□□ -0.1
NEDD4L-238	ENST00000635997	TACR2	P21452	398 aa		14.41	□□□□□ -0.1
NEDD4L-238	ENST00000635997	GPR1	P46091	355 aa		14.41	□□□□□ -0.1
NEDD4L-238	ENST00000635997	ANKRD22	Q5VYY1	191 aa		14.41	□□□□□ -0.1
NEDD4L-238	ENST00000635997	PCDH19	Q8TAB3	1148 aa		14.41	□□□□□ -0.1
NEDD4L-238	ENST00000635997	CYGB	Q8WWM9	190 aa		14.41	□□□□□ -0.1
NEDD4L-238	ENST00000635997	LRRC4C	Q9HCJ2	640 aa		14.41	□□□□□ -0.1
NEDD4L-238	ENST00000635997	DTNA	Q9Y4J8	743 aa		14.41	□□□□□ -0.1
NEDD4L-238	ENST00000635997	ZBTB14	O43829	449 aa		14.41	□□□□□ -0.1
NEDD4L-238	ENST00000635997	KDM1A	O60341	852 aa		14.41	□□□□□ -0.1
NEDD4L-238	ENST00000635997	SEC22B	O75396	215 aa		14.41	□□□□□ -0.1
NEDD4L-238	ENST00000635997	INPP1	P49441	399 aa		14.41	□□□□□ -0.1
NEDD4L-238	ENST00000635997	TEX9	Q8N6V9	391 aa		14.41	□□□□□ -0.1
NEDD4L-238	ENST00000635997	TRPV1	Q8NER1	839 aa		14.41	□□□□□ -0.1
NEDD4L-238	ENST00000635997	OR4K2	Q8NGD2	314 aa		14.41	□□□□□ -0.1
NEDD4L-238	ENST00000635997	BPIFB1	Q8TDL5	484 aa		14.41	□□□□□ -0.1
NEDD4L-238	ENST00000635997	AGAP11	Q8TF27	550 aa		14.41	□□□□□ -0.1
NEDD4L-238	ENST00000635997	HGH1	Q9BTY7	390 aa		14.41	□□□□□ -0.1
NEDD4L-238	ENST00000635997	KL	Q9UEF7	1012 aa		14.41	□□□□□ -0.1
NEDD4L-238	ENST00000635997	YIPF1	Q9Y548	306 aa		14.41	□□□□□ -0.1
NEDD4L-238	ENST00000635997	KAT6A	Q92794	2004 aa		14.41	□□□□□ -0.1
NEDD4L-238	ENST00000635997	UNG	P13051	313 aa	Predicted RBP	14.4	□□□□□ -0.1
NEDD4L-238	ENST00000635997	CRABP2	P29373	138 aa		14.4	□□□□□ -0.1
NEDD4L-238	ENST00000635997	CLEC20A	Q6ZU45	233 aa		14.4	□□□□□ -0.1
NEDD4L-238	ENST00000635997		Q7L0L9	218 aa		14.4	□□□□□ -0.1
NEDD4L-238	ENST00000635997	ARMCX6	Q7L4S7	300 aa		14.4	□□□□□ -0.1
NEDD4L-238	ENST00000635997	DEFB107A	Q8IZN7	70 aa		14.4	□□□□□ -0.1
NEDD4L-238	ENST00000635997	ART4	Q93070	314 aa		14.4	□□□□□ -0.1
NEDD4L-238	ENST00000635997	DACH2	Q96NX9	599 aa		14.4	□□□□□ -0.1
NEDD4L-238	ENST00000635997	CDCA3	Q99618	268 aa	Predicted RBP	14.4	□□□□□ -0.1
NEDD4L-238	ENST00000635997	KXD1	Q9BQD3	176 aa		14.4	□□□□□ -0.1
NEDD4L-238	ENST00000635997	THSD7A	Q9UPZ6	1657 aa		14.4	□□□□□ -0.1
NEDD4L-238	ENST00000635997	KRT6A	P02538	564 aa		14.4	□□□□□ -0.1
NEDD4L-238	ENST00000635997	KRT6B	P04259	564 aa		14.4	□□□□□ -0.1
NEDD4L-238	ENST00000635997	THRA	P10827	490 aa		14.4	□□□□□ -0.1
NEDD4L-238	ENST00000635997	HNRNPL	P14866	589 aa	Known RBP eCLIP	14.4	□□□□□ -0.1	4e-7	■■■□□ 17.8
NEDD4L-238	ENST00000635997	KRT6C	P48668	564 aa		14.4	□□□□□ -0.1
NEDD4L-238	ENST00000635997	SH3BGR	P55822	239 aa	Predicted RBP	14.4	□□□□□ -0.1
NEDD4L-238	ENST00000635997	CCDC142	Q17RM4	750 aa		14.4	□□□□□ -0.1
NEDD4L-238	ENST00000635997	PTGR2	Q8N8N7	351 aa	Predicted RBP	14.4	□□□□□ -0.1
NEDD4L-238	ENST00000635997	TRPC4AP	Q8TEL6	797 aa		14.4	□□□□□ -0.1
NEDD4L-238	ENST00000635997	PSMG2	Q969U7	264 aa		14.4	□□□□□ -0.1
NEDD4L-238	ENST00000635997	NRBF2	Q96F24	287 aa		14.4	□□□□□ -0.1
NEDD4L-238	ENST00000635997	CCDC3	Q9BQI4	270 aa		14.4	□□□□□ -0.1
NEDD4L-238	ENST00000635997	NEUROG2	Q9H2A3	272 aa		14.4	□□□□□ -0.1

Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms