RNA–Protein interactions for RNA: ENST00000635886.1

C11orf53-202, Transcript of chromosome 11 open reading frame 53, humanhuman

TSL 5

Gene C11orf53, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf53-202ENST00000635886 LRRN4Q8WUT4 740 aa13.56□□□□□ -0.24
C11orf53-202ENST00000635886 NSMCE1Q8WV22 266 aa13.56□□□□□ -0.24
C11orf53-202ENST00000635886 ECHDC3Q96DC8 303 aa13.56□□□□□ -0.24
C11orf53-202ENST00000635886 RNF157Q96PX1 679 aa13.56□□□□□ -0.24
C11orf53-202ENST00000635886 KLF6Q99612 283 aaPredicted RBP13.56□□□□□ -0.24
C11orf53-202ENST00000635886 MGME1Q9BQP7 344 aa13.56□□□□□ -0.24
C11orf53-202ENST00000635886 WRAP53Q9BUR4 548 aaKnown RBP13.56□□□□□ -0.24
C11orf53-202ENST00000635886 ERVMER34-1Q9H9K5 563 aa13.56□□□□□ -0.24
C11orf53-202ENST00000635886 PCDH12Q9NPG4 1184 aa13.56□□□□□ -0.24
C11orf53-202ENST00000635886 LUC7LQ9NQ29 371 aaKnown RBP13.56□□□□□ -0.24
C11orf53-202ENST00000635886 PCOLCE2Q9UKZ9 415 aa13.56□□□□□ -0.24
C11orf53-202ENST00000635886 BTBD3Q9Y2F9 522 aa13.56□□□□□ -0.24
C11orf53-202ENST00000635886 CABIN1Q9Y6J0 2220 aa13.56□□□□□ -0.24
C11orf53-202ENST00000635886 TP53BP1Q12888 1972 aaPredicted RBP13.56□□□□□ -0.24
C11orf53-202ENST00000635886 PCNX2A6NKB5 2137 aa13.55□□□□□ -0.24
C11orf53-202ENST00000635886 A0A0A6YYK5 440 aaPredicted RBP13.55□□□□□ -0.24
C11orf53-202ENST00000635886 TRAFD1O14545 582 aaPredicted RBP13.55□□□□□ -0.24
C11orf53-202ENST00000635886 FLRT2O43155 660 aa13.55□□□□□ -0.24
C11orf53-202ENST00000635886 PMLP29590 882 aa13.55□□□□□ -0.24
C11orf53-202ENST00000635886 CDC25BP30305 580 aa13.55□□□□□ -0.24
C11orf53-202ENST00000635886 ARRB1P49407 418 aaPredicted RBP13.55□□□□□ -0.24
C11orf53-202ENST00000635886 MAXP61244 160 aa13.55□□□□□ -0.24
C11orf53-202ENST00000635886 SEMG2Q02383 582 aa13.55□□□□□ -0.24
C11orf53-202ENST00000635886 ELP6Q0PNE2 266 aa13.55□□□□□ -0.24
C11orf53-202ENST00000635886 SLC10A2Q12908 348 aaPredicted RBP13.55□□□□□ -0.24
C11orf53-202ENST00000635886 HNRNPDQ14103 355 aaKnown RBP13.55□□□□□ -0.24
C11orf53-202ENST00000635886 TRIP6Q15654 476 aaKnown RBP13.55□□□□□ -0.24
C11orf53-202ENST00000635886 TMEM52BQ4KMG9 183 aa13.55□□□□□ -0.24
C11orf53-202ENST00000635886 GATAD2AQ86YP4 633 aa13.55□□□□□ -0.24
C11orf53-202ENST00000635886 TEX26Q8N6G2 289 aa13.55□□□□□ -0.24
C11orf53-202ENST00000635886 PLD5Q8N7P1 536 aa13.55□□□□□ -0.24
C11orf53-202ENST00000635886 SPC24Q8NBT2 197 aa13.55□□□□□ -0.24
C11orf53-202ENST00000635886 CXorf40AQ8TE69 158 aa13.55□□□□□ -0.24
C11orf53-202ENST00000635886 ASB12Q8WXK4 309 aa13.55□□□□□ -0.24
C11orf53-202ENST00000635886 RNF25Q96BH1 459 aaPredicted RBP13.55□□□□□ -0.24
C11orf53-202ENST00000635886 BMFQ96LC9 184 aa13.55□□□□□ -0.24
C11orf53-202ENST00000635886 LENG8Q96PV6 779 aaPredicted RBP13.55□□□□□ -0.24
C11orf53-202ENST00000635886 NUDCD1Q96RS6 583 aa13.55□□□□□ -0.24
C11orf53-202ENST00000635886 ANP32EQ9BTT0 268 aa13.55□□□□□ -0.24
C11orf53-202ENST00000635886 NOD2Q9HC29 1040 aa13.55□□□□□ -0.24
C11orf53-202ENST00000635886 NT5MQ9NPB1 228 aa13.55□□□□□ -0.24
C11orf53-202ENST00000635886 SCUBE2Q9NQ36 999 aa13.55□□□□□ -0.24
C11orf53-202ENST00000635886 DTLQ9NZJ0 730 aa13.55□□□□□ -0.24
C11orf53-202ENST00000635886 SALL4Q9UJQ4 1053 aa13.55□□□□□ -0.24
C11orf53-202ENST00000635886 ATP8A1Q9Y2Q0 1164 aa13.55□□□□□ -0.24
C11orf53-202ENST00000635886 REXO2Q9Y3B8 237 aaKnown RBP13.55□□□□□ -0.24
C11orf53-202ENST00000635886 PCDHB9Q9Y5E1 797 aa13.55□□□□□ -0.24
C11orf53-202ENST00000635886 HS3ST3A1Q9Y663 406 aa13.55□□□□□ -0.24
C11orf53-202ENST00000635886 ALG6Q9Y672 507 aa13.55□□□□□ -0.24
C11orf53-202ENST00000635886 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.54□□□□□ -0.24
C11orf53-202ENST00000635886 RCCD1A6NED2 376 aa13.54□□□□□ -0.24
C11orf53-202ENST00000635886 POM121BA6NF01 834 aa13.54□□□□□ -0.24
C11orf53-202ENST00000635886 A6NNZ2 444 aa13.54□□□□□ -0.24
C11orf53-202ENST00000635886 ZNF487B1APH4 448 aa13.54□□□□□ -0.24
C11orf53-202ENST00000635886 RIOK3O14730 519 aaKnown RBP13.54□□□□□ -0.24
C11orf53-202ENST00000635886 TM7SF2O76062 418 aa13.54□□□□□ -0.24
C11orf53-202ENST00000635886 IPO7O95373 1038 aaKnown RBP13.54□□□□□ -0.24
C11orf53-202ENST00000635886 MX2P20592 715 aa13.54□□□□□ -0.24
C11orf53-202ENST00000635886 EPHA8P29322 1005 aaPredicted RBP13.54□□□□□ -0.24
C11orf53-202ENST00000635886 MMP12P39900 470 aa13.54□□□□□ -0.24
C11orf53-202ENST00000635886 GRK6P43250 576 aa13.54□□□□□ -0.24
C11orf53-202ENST00000635886 RXRGP48443 463 aa13.54□□□□□ -0.24
C11orf53-202ENST00000635886 IFI16Q16666 785 aaKnown RBP13.54□□□□□ -0.24
C11orf53-202ENST00000635886 SLC9A4Q6AI14 798 aa13.54□□□□□ -0.24
C11orf53-202ENST00000635886 TIGD7Q6NT04 549 aaPredicted RBP13.54□□□□□ -0.24
C11orf53-202ENST00000635886 ERAP2Q6P179 960 aa13.54□□□□□ -0.24
C11orf53-202ENST00000635886 MFSD7Q6UXD7 560 aa13.54□□□□□ -0.24
C11orf53-202ENST00000635886 KYAT3Q6YP21 454 aaKnown RBP13.54□□□□□ -0.24
C11orf53-202ENST00000635886 KDM7AQ6ZMT4 941 aa13.54□□□□□ -0.24
C11orf53-202ENST00000635886 Q6ZSR6 202 aa13.54□□□□□ -0.24
C11orf53-202ENST00000635886 PTAR1Q7Z6K3 402 aaPredicted RBP13.54□□□□□ -0.24
C11orf53-202ENST00000635886 VSIG1Q86XK7 387 aa13.54□□□□□ -0.24
C11orf53-202ENST00000635886 SLC22A18ASQ8N1D0 253 aa13.54□□□□□ -0.24
C11orf53-202ENST00000635886 OXR1Q8N573 874 aa13.54□□□□□ -0.24
C11orf53-202ENST00000635886 PAF1Q8N7H5 531 aa13.54□□□□□ -0.24
C11orf53-202ENST00000635886 ACRBPQ8NEB7 543 aa13.54□□□□□ -0.24
C11orf53-202ENST00000635886 BAHD1Q8TBE0 780 aaPredicted RBP13.54□□□□□ -0.24
C11orf53-202ENST00000635886 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.54□□□□□ -0.24
C11orf53-202ENST00000635886 RHBDD1Q8TEB9 315 aa13.54□□□□□ -0.24
C11orf53-202ENST00000635886 SAP25Q8TEE9 199 aa13.54□□□□□ -0.24
C11orf53-202ENST00000635886 MAML1Q92585 1016 aa13.54□□□□□ -0.24
C11orf53-202ENST00000635886 TSGA13Q96PP4 275 aa13.54□□□□□ -0.24
C11orf53-202ENST00000635886 BAG1Q99933 345 aaPredicted RBP13.54□□□□□ -0.24
C11orf53-202ENST00000635886 DDX56Q9NY93 547 aaKnown RBP13.54□□□□□ -0.24
C11orf53-202ENST00000635886 PCDHGC4Q9Y5F7 938 aa13.54□□□□□ -0.24
C11orf53-202ENST00000635886 SHROOM3Q8TF72 1996 aa13.53□□□□□ -0.24
C11orf53-202ENST00000635886 FPGTO14772 594 aa13.53□□□□□ -0.24
C11orf53-202ENST00000635886 APOL1O14791 398 aa13.53□□□□□ -0.24
C11orf53-202ENST00000635886 MATN3O15232 486 aa13.53□□□□□ -0.24
C11orf53-202ENST00000635886 YKT6O15498 198 aa13.53□□□□□ -0.24
C11orf53-202ENST00000635886 HTRA2O43464 458 aaPredicted RBP13.53□□□□□ -0.24
C11orf53-202ENST00000635886 PSTPIP1O43586 416 aa13.53□□□□□ -0.24
C11orf53-202ENST00000635886 SOCS5O75159 536 aa13.53□□□□□ -0.24
C11orf53-202ENST00000635886 ITGAVP06756 1048 aa13.53□□□□□ -0.24
C11orf53-202ENST00000635886 C6P13671 934 aa13.53□□□□□ -0.24
C11orf53-202ENST00000635886 CCNCP24863 283 aa13.53□□□□□ -0.24
C11orf53-202ENST00000635886 TRAF2Q12933 501 aa13.53□□□□□ -0.24
C11orf53-202ENST00000635886 FOXC1Q12948 553 aa13.53□□□□□ -0.24
C11orf53-202ENST00000635886 RALGDSQ12967 914 aa13.53□□□□□ -0.24
C11orf53-202ENST00000635886 BNIP3Q12983 259 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms