RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 TMEM171Q8WVE6 324 aa3.06□□□□□ -1.92
PSPC1-208ENST00000635562 OSCP1Q8WVF1 389 aa3.06□□□□□ -1.92
PSPC1-208ENST00000635562 ANKRD7Q92527 254 aa3.06□□□□□ -1.92
PSPC1-208ENST00000635562 FAM162AQ96A26 154 aa3.06□□□□□ -1.92
PSPC1-208ENST00000635562 DHX58Q96C10 678 aa3.06□□□□□ -1.92
PSPC1-208ENST00000635562 ZNF653Q96CK0 615 aa3.06□□□□□ -1.92
PSPC1-208ENST00000635562 RSPRY1Q96DX4 576 aa3.06□□□□□ -1.92
PSPC1-208ENST00000635562 SGF29Q96ES7 293 aa3.06□□□□□ -1.92
PSPC1-208ENST00000635562 PGAP3Q96FM1 320 aaPredicted RBP3.06□□□□□ -1.92
PSPC1-208ENST00000635562 HS6ST2Q96MM7 605 aa3.06□□□□□ -1.92
PSPC1-208ENST00000635562 TCEANC2Q96MN5 208 aa3.06□□□□□ -1.92
PSPC1-208ENST00000635562 NUDCD1Q96RS6 583 aa3.06□□□□□ -1.92
PSPC1-208ENST00000635562 NAP1L3Q99457 506 aaPredicted RBP3.06□□□□□ -1.92
PSPC1-208ENST00000635562 RIOK1Q9BRS2 568 aaKnown RBP3.06□□□□□ -1.92
PSPC1-208ENST00000635562 THUMPD3Q9BV44 507 aaKnown RBP3.06□□□□□ -1.92
PSPC1-208ENST00000635562 VN1R3Q9BXE9 311 aa3.06□□□□□ -1.92
PSPC1-208ENST00000635562 ACTRT3Q9BYD9 372 aa3.06□□□□□ -1.92
PSPC1-208ENST00000635562 GPR63Q9BZJ6 419 aa3.06□□□□□ -1.92
PSPC1-208ENST00000635562 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.06□□□□□ -1.92
PSPC1-208ENST00000635562 GLT8D2Q9H1C3 349 aa3.06□□□□□ -1.92
PSPC1-208ENST00000635562 SLC25A32Q9H2D1 315 aa3.06□□□□□ -1.92
PSPC1-208ENST00000635562 NDST4Q9H3R1 872 aa3.06□□□□□ -1.92
PSPC1-208ENST00000635562 C8orf33Q9H7E9 229 aaPredicted RBP3.06□□□□□ -1.92
PSPC1-208ENST00000635562 MRPL44Q9H9J2 332 aaKnown RBP3.06□□□□□ -1.92
PSPC1-208ENST00000635562 SAYSD1Q9NPB0 183 aa3.06□□□□□ -1.92
PSPC1-208ENST00000635562 GPR108Q9NPR9 543 aa3.06□□□□□ -1.92
PSPC1-208ENST00000635562 NRIP3Q9NQ35 241 aa3.06□□□□□ -1.92
PSPC1-208ENST00000635562 TRIM36Q9NQ86 728 aa3.06□□□□□ -1.92
PSPC1-208ENST00000635562 POLE3Q9NRF9 147 aa3.06□□□□□ -1.92
PSPC1-208ENST00000635562 SIRT3Q9NTG7 399 aaPredicted RBP3.06□□□□□ -1.92
PSPC1-208ENST00000635562 SLC35D1Q9NTN3 355 aa3.06□□□□□ -1.92
PSPC1-208ENST00000635562 ATAD3AQ9NVI7 634 aa3.06□□□□□ -1.92
PSPC1-208ENST00000635562 ANO10Q9NW15 660 aa3.06□□□□□ -1.92
PSPC1-208ENST00000635562 GDAP2Q9NXN4 497 aa3.06□□□□□ -1.92
PSPC1-208ENST00000635562 HMG20BQ9P0W2 317 aa3.06□□□□□ -1.92
PSPC1-208ENST00000635562 DNAJB9Q9UBS3 223 aa3.06□□□□□ -1.92
PSPC1-208ENST00000635562 DNAJB11Q9UBS4 358 aa3.06□□□□□ -1.92
PSPC1-208ENST00000635562 TNIKQ9UKE5 1360 aa3.06□□□□□ -1.92
PSPC1-208ENST00000635562 CPSF3Q9UKF6 684 aaKnown RBP3.06□□□□□ -1.92
PSPC1-208ENST00000635562 ZNF215Q9UL58 517 aaPredicted RBP3.06□□□□□ -1.92
PSPC1-208ENST00000635562 CCPG1Q9ULG6 757 aa3.06□□□□□ -1.92
PSPC1-208ENST00000635562 GABRQQ9UN88 632 aa3.06□□□□□ -1.92
PSPC1-208ENST00000635562 SCAF8Q9UPN6 1271 aaKnown RBP3.06□□□□□ -1.92
PSPC1-208ENST00000635562 AURKCQ9UQB9 309 aa3.06□□□□□ -1.92
PSPC1-208ENST00000635562 ASB3Q9Y575 518 aa3.06□□□□□ -1.92
PSPC1-208ENST00000635562 PIAS3Q9Y6X2 628 aa3.06□□□□□ -1.92
PSPC1-208ENST00000635562 MAST3O60307 1309 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 MYO3BQ8WXR4 1341 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 GOLGA6L7A0A1B0GV03 622 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 PTGES3LE9PB15 166 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 H3BNC9 293 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 SLC16A3O15427 465 aaKnown RBP3.05□□□□□ -1.92
PSPC1-208ENST00000635562 ADAM20O43506 726 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 SLC25A17O43808 307 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 DIAPH2O60879 1101 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 BCAS2O75934 225 aaPredicted RBP3.05□□□□□ -1.92
PSPC1-208ENST00000635562 TJP3O95049 919 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 TNFRSF6BO95407 300 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 SERPINC1P01008 464 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 S100A9P06702 114 aaKnown RBP3.05□□□□□ -1.92
PSPC1-208ENST00000635562 RHOP08100 348 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 HNRNPA1P09651 372 aaKnown RBP eCLIP3.05□□□□□ -1.92
PSPC1-208ENST00000635562 JUPP14923 745 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 TYMPP19971 482 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 EPHA3P29320 983 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 GRK5P34947 590 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 ARL3P36405 182 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 EIF2DP41214 584 aaKnown RBP3.05□□□□□ -1.92
PSPC1-208ENST00000635562 DHPSP49366 369 aaPredicted RBP3.05□□□□□ -1.92
PSPC1-208ENST00000635562 VPS41P49754 854 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 LUMP51884 338 aaPredicted RBP3.05□□□□□ -1.92
PSPC1-208ENST00000635562 PGDP52209 483 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 AP3M2P53677 418 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 PNLIPRP1P54315 467 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 HAND2P61296 217 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 ARF5P84085 180 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 BNIP1Q12981 228 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 TRAF1Q13077 416 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 MTAPQ13126 283 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 IDI1Q13907 227 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 DOC2AQ14183 400 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 DPYSL2Q16555 572 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 BAK1Q16611 211 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 TXNRD1Q16881 649 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 LY6KQ17RY6 165 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 TYSND1Q2T9J0 566 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 TRIM60Q495X7 471 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 TDRD12Q587J7 1177 aaKnown RBP3.05□□□□□ -1.92
PSPC1-208ENST00000635562 HSP90AA5PQ58FG0 334 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 BMP2KLQ5H9B9 411 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 DEPDC1Q5TB30 811 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 C12orf60Q5U649 245 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 SFMBT2Q5VUG0 894 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 GARNL3Q5VVW2 1013 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 SULT6B1Q6IMI4 303 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 SLC25A24Q6NUK1 477 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 KLC3Q6P597 504 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 LRIG3Q6UXM1 1119 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 METTL23Q86XA0 190 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 ARMC8Q8IUR7 673 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms